; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10013875 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10013875
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Descriptionplastid transcriptionally active 6
Genome locationChr02:5614429..5618535
RNA-Seq ExpressionHG10013875
SyntenyHG10013875
Gene Ontology termsGO:0000427 - plastid-encoded plastid RNA polymerase complex (cellular component)
InterPro domainsIPR044710 - PLASTID TRANSCRIPTIONALLY ACTIVE protein 6


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0052214.1 uncharacterized protein E6C27_scaffold207G00250 [Cucumis melo var. makuwa]4.2e-18095.25Show/hide
Query:  MNSTVFLLSSPLPAATIHRLRAPSISASSSLPHLPSLPYRQSTPSAPTLFVPRKNPFRVFSDDGDGDSGGPDDYDMDDDEMEEVDNKKDFDIEYDPLAAA
        MNSTVFLLS PLP  TI+RLRA SISA++SLPHLPSLPYR+STPSA  LF+PR+NPFRVFSDDGDGDSGGPDDYDMDD+EMEEVDNKKDFDIEYDPLAAA
Subjt:  MNSTVFLLSSPLPAATIHRLRAPSISASSSLPHLPSLPYRQSTPSAPTLFVPRKNPFRVFSDDGDGDSGGPDDYDMDDDEMEEVDNKKDFDIEYDPLAAA

Query:  AAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQ
        AAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQ
Subjt:  AAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQ

Query:  SDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFRIIHSS
        SDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRA+VLVTVPGGRDRDRRSDLLVVRDNGNSF+IIHSS
Subjt:  SDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFRIIHSS

Query:  ERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF
        ERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISN F
Subjt:  ERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF

KAG6591867.1 PLASTID TRANSCRIPTIONALLY ACTIVE protein 6, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]6.0e-17995.56Show/hide
Query:  MNSTVFLLSSPLPAATIHRLRAPSISASSSLPHLPSLPYRQSTPSAPTLFVPRKNPFRVFSDDGDGDSGGPDDYDMDDDEMEEVDNKKDFDIEYDPL-AA
        MNSTVFLLSSPLP ATIHRLR PSISA+SSL HLPSLPYR+STPSA  LFVPR+NPFRVFSDDGDGDSGGPDDYDM DDEMEEVDNKKDFDIEYD L AA
Subjt:  MNSTVFLLSSPLPAATIHRLRAPSISASSSLPHLPSLPYRQSTPSAPTLFVPRKNPFRVFSDDGDGDSGGPDDYDMDDDEMEEVDNKKDFDIEYDPL-AA

Query:  AAAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCA
        AAAAAAGS+GVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCA
Subjt:  AAAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCA

Query:  QSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFRIIHS
        QSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRL DPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGR RDRRSDLLVVRDNGNSF+IIHS
Subjt:  QSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFRIIHS

Query:  SERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF
        SERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF
Subjt:  SERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF

XP_008444205.1 PREDICTED: uncharacterized protein LOC103487613 [Cucumis melo]1.3e-18195.55Show/hide
Query:  MNSTVFLLSSPLPAATIHRLRAPSISASSSLPHLPSLPYRQSTPSAPTLFVPRKNPFRVFSDDGDGDSGGPDDYDMDDDEMEEVDNKKDFDIEYDPLAAA
        MNSTVFLLS PLP  TI+RLRA SISA++SLPHLPSLPYR+STPSA  LF+PR+NPFRVFSDDGDGDSGGPDDYDMDD+EMEEVDNKKDFDIEYDPLAAA
Subjt:  MNSTVFLLSSPLPAATIHRLRAPSISASSSLPHLPSLPYRQSTPSAPTLFVPRKNPFRVFSDDGDGDSGGPDDYDMDDDEMEEVDNKKDFDIEYDPLAAA

Query:  AAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQ
        AAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQ
Subjt:  AAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQ

Query:  SDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFRIIHSS
        SDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRA+VLVTVPGGRDRDRRSDLLVVRDNGNSF+IIHSS
Subjt:  SDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFRIIHSS

Query:  ERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF
        ERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF
Subjt:  ERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF

XP_031740569.1 uncharacterized protein LOC101213327 [Cucumis sativus]4.6e-17994.07Show/hide
Query:  MNSTVFLLSSPLPAATIHRLRAPSISASSSLPHLPSLPYRQSTPSAPTLFVPRKNPFRVFSDDGDGDSGGPDDYDMDDDEMEEVDNKKDFDIEYDPLAAA
        MNSTVFLLSSPLP  TI+RLR  SIS+++SLPHLPSLPY ++TP A  LF+PR+NPFRVFSDDGDGDSGGPDDYDMDD+EMEEVDNKKDFDIEYDPLAAA
Subjt:  MNSTVFLLSSPLPAATIHRLRAPSISASSSLPHLPSLPYRQSTPSAPTLFVPRKNPFRVFSDDGDGDSGGPDDYDMDDDEMEEVDNKKDFDIEYDPLAAA

Query:  AAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQ
        AAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPD+DVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQ
Subjt:  AAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQ

Query:  SDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFRIIHSS
        SDYGCYNVTEPPID+PRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSF+IIHSS
Subjt:  SDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFRIIHSS

Query:  ERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF
        ERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF
Subjt:  ERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF

XP_038896770.1 uncharacterized protein LOC120085024 [Benincasa hispida]1.1e-18095.55Show/hide
Query:  MNSTVFLLSSPLPAATIHRLRAPSISASSSLPHLPSLPYRQSTPSAPTLFVPRKNPFRVFSDDGDGDSGGPDDYDMDDDEMEEVDNKKDFDIEYDPLAAA
        MNSTV L+SSPL  ATI+RLRA SISA+SSLPHLPSLPYR+STPS   LF PR+NPFRVFSDDGDGDSGGPDDYDMDD+EMEEVDNKKDFDIEYDPLAAA
Subjt:  MNSTVFLLSSPLPAATIHRLRAPSISASSSLPHLPSLPYRQSTPSAPTLFVPRKNPFRVFSDDGDGDSGGPDDYDMDDDEMEEVDNKKDFDIEYDPLAAA

Query:  AAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQ
        AAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQ
Subjt:  AAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQ

Query:  SDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFRIIHSS
        SDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSF+IIHSS
Subjt:  SDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFRIIHSS

Query:  ERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF
        ERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF
Subjt:  ERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF

TrEMBL top hitse value%identityAlignment
A0A1S3BAM8 uncharacterized protein LOC1034876136.3e-18295.55Show/hide
Query:  MNSTVFLLSSPLPAATIHRLRAPSISASSSLPHLPSLPYRQSTPSAPTLFVPRKNPFRVFSDDGDGDSGGPDDYDMDDDEMEEVDNKKDFDIEYDPLAAA
        MNSTVFLLS PLP  TI+RLRA SISA++SLPHLPSLPYR+STPSA  LF+PR+NPFRVFSDDGDGDSGGPDDYDMDD+EMEEVDNKKDFDIEYDPLAAA
Subjt:  MNSTVFLLSSPLPAATIHRLRAPSISASSSLPHLPSLPYRQSTPSAPTLFVPRKNPFRVFSDDGDGDSGGPDDYDMDDDEMEEVDNKKDFDIEYDPLAAA

Query:  AAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQ
        AAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQ
Subjt:  AAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQ

Query:  SDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFRIIHSS
        SDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRA+VLVTVPGGRDRDRRSDLLVVRDNGNSF+IIHSS
Subjt:  SDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFRIIHSS

Query:  ERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF
        ERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF
Subjt:  ERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF

A0A5A7UA32 Uncharacterized protein2.0e-18095.25Show/hide
Query:  MNSTVFLLSSPLPAATIHRLRAPSISASSSLPHLPSLPYRQSTPSAPTLFVPRKNPFRVFSDDGDGDSGGPDDYDMDDDEMEEVDNKKDFDIEYDPLAAA
        MNSTVFLLS PLP  TI+RLRA SISA++SLPHLPSLPYR+STPSA  LF+PR+NPFRVFSDDGDGDSGGPDDYDMDD+EMEEVDNKKDFDIEYDPLAAA
Subjt:  MNSTVFLLSSPLPAATIHRLRAPSISASSSLPHLPSLPYRQSTPSAPTLFVPRKNPFRVFSDDGDGDSGGPDDYDMDDDEMEEVDNKKDFDIEYDPLAAA

Query:  AAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQ
        AAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQ
Subjt:  AAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQ

Query:  SDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFRIIHSS
        SDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRA+VLVTVPGGRDRDRRSDLLVVRDNGNSF+IIHSS
Subjt:  SDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFRIIHSS

Query:  ERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF
        ERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISN F
Subjt:  ERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF

A0A5J5BWI0 Uncharacterized protein1.0e-13975.07Show/hide
Query:  MNSTVFLLSSPLPAATIHRLRAPSISASSSLPHLPSLPYRQSTPSAPTLFVPRKNPFRVFSDDGDGDSGGPDDYDMDDDEMEEVDNKKDFDIEYDPLAAA
        M +T+ L   PL        + P ++  +SL   P+L +    P    +F PR + FRV++DDGD D GGPDDYDMD++E+EEVDNKKD+D+EYDPLAAA
Subjt:  MNSTVFLLSSPLPAATIHRLRAPSISASSSLPHLPSLPYRQSTPSAPTLFVPRKNPFRVFSDDGDGDSGGPDDYDMDDDEMEEVDNKKDFDIEYDPLAAA

Query:  AAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQ
        AA+A G  G GD++I +V SKSFVS QGWDSE IVDYRINE+EFHKISLL CDFFIRKPPDPDNDVYDFREMYVTPPDTD+YAIP+VLAP+PQKYIRCA+
Subjt:  AAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQ

Query:  SDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFRIIHSS
        SDYGCYNVTEPPIDAPRDPLYKSE E+ KVFLTKH+RNRRL DPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGR+RDR+ DLLV+RDNGNSF+IIHSS
Subjt:  SDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFRIIHSS

Query:  ERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF
        +R+DPTTVIE+EEW KTRQDMERHLRKLRDFS+SNWF
Subjt:  ERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF

A0A6J1F6A7 uncharacterized protein LOC1114425727.2e-17894.71Show/hide
Query:  MNSTVFLLSSPLPAATIHRLRAPSISASSSLPHLPSLPYRQSTPSAPTLFVPRKNPFRVFSDDGDGDSGGPDDYDMDDDEMEEVDNKKDFDIEYDPL---
        MNSTVFLLSSPLP ATIHRLR PSISA+SSL HLPSL YR+STPSA  LFVPR+NPFRVFSDDGDGDSGGPDDYDM DDEMEEVDNKKDFDIEYD L   
Subjt:  MNSTVFLLSSPLPAATIHRLRAPSISASSSLPHLPSLPYRQSTPSAPTLFVPRKNPFRVFSDDGDGDSGGPDDYDMDDDEMEEVDNKKDFDIEYDPL---

Query:  AAAAAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIR
        AAAAAAAAGS+GVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIR
Subjt:  AAAAAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIR

Query:  CAQSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFRII
        CAQSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRL DPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGR RDRRSDLLVVRDNGNSF+II
Subjt:  CAQSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFRII

Query:  HSSERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF
        HSSERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF
Subjt:  HSSERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF

A0A6J1IGR4 uncharacterized protein LOC1114770761.5e-17894.74Show/hide
Query:  MNSTVFLLSS--PLPAATIHRLRAPSISASSSLPHLPSLPYRQSTPSAPTLFVPRKNPFRVFSDDGDGDSGGPDDYDMDDDEMEEVDNKKDFDIEYDPL-
        MNSTVFLLSS  PLP ATIHRLR PSISA+SSLPHLPSLPYR+STPSA  LFVPR+NPFRVFSDDGDGDSGGPDDYDM DDEMEEVDNKKDFDIEYD L 
Subjt:  MNSTVFLLSS--PLPAATIHRLRAPSISASSSLPHLPSLPYRQSTPSAPTLFVPRKNPFRVFSDDGDGDSGGPDDYDMDDDEMEEVDNKKDFDIEYDPL-

Query:  --AAAAAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKY
          AAAAAAAAGS+GVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKY
Subjt:  --AAAAAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKY

Query:  IRCAQSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFR
        IRCAQSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRL DPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGR RDRRSDLLVVRDNGNSF+
Subjt:  IRCAQSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFR

Query:  IIHSSERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF
        IIHSSERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF
Subjt:  IIHSSERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF

SwissProt top hitse value%identityAlignment
Q9XI19 PLASTID TRANSCRIPTIONALLY ACTIVE protein 6, chloroplastic6.8e-13374.15Show/hide
Query:  APSISASS--SLPHLPS------LPYRQSTPSAP-TLFVPRKNPFRVFSDDGDGDSGGPDDYDMDDDEMEEVDNKKDFDIEYDPLAAAAAAAAGSDGVGD
        +PS+S  S  S P  PS        +R     AP TL   R     V  DD D D GG D+YDMDD+E+EEVDNKKD+D+EYDPLAAA AAA G    GD
Subjt:  APSISASS--SLPHLPS------LPYRQSTPSAP-TLFVPRKNPFRVFSDDGDGDSGGPDDYDMDDDEMEEVDNKKDFDIEYDPLAAAAAAAAGSDGVGD

Query:  ENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQSDYGCYNVTEPP
         +I+ VQSKSF+STQGWDS+M+VDYRINE+EFHK+SL+ CDFFIRKPPDPDNDVYDFREMYVTPPDTD+Y+IP+VLAPMPQKYIRCA SDYGCYNVTEPP
Subjt:  ENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQSDYGCYNVTEPP

Query:  IDAPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFRIIHSSERDDPTTVIEKE
        IDAPRDPLYKSE+E+ KVFLTKH+RNRR  DPEFVLD EEIYVIDSKTKSITRA+VLVTVPGGR RDR+ DLLV+RDNG SF+IIH  ERDDPTTVIE+E
Subjt:  IDAPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFRIIHSSERDDPTTVIEKE

Query:  EWTKTRQDMERHLRKLRDFSISNWF
        EWTKTR+DME+HLRKLRDFS+SNWF
Subjt:  EWTKTRQDMERHLRKLRDFSISNWF

Arabidopsis top hitse value%identityAlignment
AT1G21600.1 plastid transcriptionally active 64.8e-13474.15Show/hide
Query:  APSISASS--SLPHLPS------LPYRQSTPSAP-TLFVPRKNPFRVFSDDGDGDSGGPDDYDMDDDEMEEVDNKKDFDIEYDPLAAAAAAAAGSDGVGD
        +PS+S  S  S P  PS        +R     AP TL   R     V  DD D D GG D+YDMDD+E+EEVDNKKD+D+EYDPLAAA AAA G    GD
Subjt:  APSISASS--SLPHLPS------LPYRQSTPSAP-TLFVPRKNPFRVFSDDGDGDSGGPDDYDMDDDEMEEVDNKKDFDIEYDPLAAAAAAAAGSDGVGD

Query:  ENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQSDYGCYNVTEPP
         +I+ VQSKSF+STQGWDS+M+VDYRINE+EFHK+SL+ CDFFIRKPPDPDNDVYDFREMYVTPPDTD+Y+IP+VLAPMPQKYIRCA SDYGCYNVTEPP
Subjt:  ENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQSDYGCYNVTEPP

Query:  IDAPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFRIIHSSERDDPTTVIEKE
        IDAPRDPLYKSE+E+ KVFLTKH+RNRR  DPEFVLD EEIYVIDSKTKSITRA+VLVTVPGGR RDR+ DLLV+RDNG SF+IIH  ERDDPTTVIE+E
Subjt:  IDAPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFRIIHSSERDDPTTVIEKE

Query:  EWTKTRQDMERHLRKLRDFSISNWF
        EWTKTR+DME+HLRKLRDFS+SNWF
Subjt:  EWTKTRQDMERHLRKLRDFSISNWF

AT1G21600.2 plastid transcriptionally active 64.8e-13474.15Show/hide
Query:  APSISASS--SLPHLPS------LPYRQSTPSAP-TLFVPRKNPFRVFSDDGDGDSGGPDDYDMDDDEMEEVDNKKDFDIEYDPLAAAAAAAAGSDGVGD
        +PS+S  S  S P  PS        +R     AP TL   R     V  DD D D GG D+YDMDD+E+EEVDNKKD+D+EYDPLAAA AAA G    GD
Subjt:  APSISASS--SLPHLPS------LPYRQSTPSAP-TLFVPRKNPFRVFSDDGDGDSGGPDDYDMDDDEMEEVDNKKDFDIEYDPLAAAAAAAAGSDGVGD

Query:  ENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQSDYGCYNVTEPP
         +I+ VQSKSF+STQGWDS+M+VDYRINE+EFHK+SL+ CDFFIRKPPDPDNDVYDFREMYVTPPDTD+Y+IP+VLAPMPQKYIRCA SDYGCYNVTEPP
Subjt:  ENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQSDYGCYNVTEPP

Query:  IDAPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFRIIHSSERDDPTTVIEKE
        IDAPRDPLYKSE+E+ KVFLTKH+RNRR  DPEFVLD EEIYVIDSKTKSITRA+VLVTVPGGR RDR+ DLLV+RDNG SF+IIH  ERDDPTTVIE+E
Subjt:  IDAPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFRIIHSSERDDPTTVIEKE

Query:  EWTKTRQDMERHLRKLRDFSISNWF
        EWTKTR+DME+HLRKLRDFS+SNWF
Subjt:  EWTKTRQDMERHLRKLRDFSISNWF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACGGAAAATCAGAGACTCGCAACATTACGACTGCGACTACCGCAGAAAGAGAATCCGGAGAGTCTAATTCTATCATCGTCACCGCCATGGTGCCTTCTCTGGTGGT
GATATTTTTTTCTTTTCTTTTTAACATTATCCACCTGACAAACTTCGAATTCTCCGGCGGCCGCTTCACAGAGTTGGCGACCCCAGTGCCAATTCTCCCCATGAACTCCA
CCGTCTTCCTTCTTTCATCGCCCTTGCCGGCGGCCACAATCCACCGGCTCCGAGCCCCCTCCATCTCCGCCTCAAGCTCTCTCCCCCACCTCCCGAGCCTGCCCTACCGG
CAATCCACTCCCTCTGCTCCCACTCTCTTCGTCCCTAGAAAAAATCCTTTCCGAGTCTTCTCCGACGATGGCGACGGAGATAGCGGCGGCCCCGATGACTACGACATGGA
CGACGACGAAATGGAGGAAGTGGACAACAAGAAGGATTTCGACATCGAGTACGATCCTCTAGCCGCGGCCGCAGCTGCGGCAGCGGGTTCCGACGGCGTTGGCGACGAGA
ATATCTCGATTGTGCAGAGCAAAAGCTTCGTGTCGACACAGGGGTGGGATTCGGAGATGATTGTGGATTATAGGATAAATGAGGAGGAGTTTCATAAGATTAGTCTGTTG
CACTGTGATTTCTTCATCAGAAAGCCGCCGGATCCTGACAACGATGTTTATGATTTCAGAGAGATGTATGTTACTCCTCCCGACACTGATGTCTATGCCATACCCAAAGT
TCTTGCTCCAATGCCTCAGAAGTATATTAGATGTGCTCAGAGTGATTATGGATGCTACAATGTCACAGAACCACCCATTGATGCACCTAGAGATCCACTATACAAGTCCG
AAAAGGAGGTTCTTAAGGTTTTCTTGACAAAGCACTTTAGAAACCGAAGGCTGCGTGACCCAGAATTTGTCCTAGACTTTGAGGAAATATATGTAATTGATTCAAAAACC
AAGTCAATCACCAGGGCAAAAGTCTTGGTCACAGTTCCAGGAGGAAGAGATAGGGACAGGAGAAGCGACTTGCTCGTAGTTCGGGATAATGGGAACTCTTTCAGGATCAT
CCATTCGAGCGAACGAGATGATCCGACCACGGTGATAGAGAAAGAAGAGTGGACCAAAACTAGACAAGATATGGAGAGACATCTTAGGAAGTTAAGGGACTTTAGCATTT
CAAATTGGTTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAACGGAAAATCAGAGACTCGCAACATTACGACTGCGACTACCGCAGAAAGAGAATCCGGAGAGTCTAATTCTATCATCGTCACCGCCATGGTGCCTTCTCTGGTGGT
GATATTTTTTTCTTTTCTTTTTAACATTATCCACCTGACAAACTTCGAATTCTCCGGCGGCCGCTTCACAGAGTTGGCGACCCCAGTGCCAATTCTCCCCATGAACTCCA
CCGTCTTCCTTCTTTCATCGCCCTTGCCGGCGGCCACAATCCACCGGCTCCGAGCCCCCTCCATCTCCGCCTCAAGCTCTCTCCCCCACCTCCCGAGCCTGCCCTACCGG
CAATCCACTCCCTCTGCTCCCACTCTCTTCGTCCCTAGAAAAAATCCTTTCCGAGTCTTCTCCGACGATGGCGACGGAGATAGCGGCGGCCCCGATGACTACGACATGGA
CGACGACGAAATGGAGGAAGTGGACAACAAGAAGGATTTCGACATCGAGTACGATCCTCTAGCCGCGGCCGCAGCTGCGGCAGCGGGTTCCGACGGCGTTGGCGACGAGA
ATATCTCGATTGTGCAGAGCAAAAGCTTCGTGTCGACACAGGGGTGGGATTCGGAGATGATTGTGGATTATAGGATAAATGAGGAGGAGTTTCATAAGATTAGTCTGTTG
CACTGTGATTTCTTCATCAGAAAGCCGCCGGATCCTGACAACGATGTTTATGATTTCAGAGAGATGTATGTTACTCCTCCCGACACTGATGTCTATGCCATACCCAAAGT
TCTTGCTCCAATGCCTCAGAAGTATATTAGATGTGCTCAGAGTGATTATGGATGCTACAATGTCACAGAACCACCCATTGATGCACCTAGAGATCCACTATACAAGTCCG
AAAAGGAGGTTCTTAAGGTTTTCTTGACAAAGCACTTTAGAAACCGAAGGCTGCGTGACCCAGAATTTGTCCTAGACTTTGAGGAAATATATGTAATTGATTCAAAAACC
AAGTCAATCACCAGGGCAAAAGTCTTGGTCACAGTTCCAGGAGGAAGAGATAGGGACAGGAGAAGCGACTTGCTCGTAGTTCGGGATAATGGGAACTCTTTCAGGATCAT
CCATTCGAGCGAACGAGATGATCCGACCACGGTGATAGAGAAAGAAGAGTGGACCAAAACTAGACAAGATATGGAGAGACATCTTAGGAAGTTAAGGGACTTTAGCATTT
CAAATTGGTTTTAA
Protein sequenceShow/hide protein sequence
MNGKSETRNITTATTAERESGESNSIIVTAMVPSLVVIFFSFLFNIIHLTNFEFSGGRFTELATPVPILPMNSTVFLLSSPLPAATIHRLRAPSISASSSLPHLPSLPYR
QSTPSAPTLFVPRKNPFRVFSDDGDGDSGGPDDYDMDDDEMEEVDNKKDFDIEYDPLAAAAAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLL
HCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKT
KSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFRIIHSSERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF