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HG10013878 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10013878
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionLate embryogenesis abundant protein, group 6
Genome locationChr02:5632358..5632645
RNA-Seq ExpressionHG10013878
SyntenyHG10013878
Gene Ontology termsNA
InterPro domainsIPR018930 - Late embryogenesis abundant protein, LEA-18


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064662.1 late embryogenesis abundant protein group 8 protein [Cucumis melo var. makuwa]8.9e-3390.8Show/hide
Query:  EEQPQQQMMEKKEEKAPVEDLLPLESSPYVKYKDLEEYKRKGYGAEGHLEPKPNHGGGGTDAPTLSGSGFPEVKPTTIDVVTKQGLI
        EEQ Q QMM K EEKAPVEDLLPLESSPYVKYKDLEEYKRKGYGAEGHLEPKPN  GGGTDAPTLSGSG+PEV+PTTIDVVTKQGLI
Subjt:  EEQPQQQMMEKKEEKAPVEDLLPLESSPYVKYKDLEEYKRKGYGAEGHLEPKPNHGGGGTDAPTLSGSGFPEVKPTTIDVVTKQGLI

KAE8649966.1 hypothetical protein Csa_012992 [Cucumis sativus]7.6e-3286.67Show/hide
Query:  SNNEEQPQQQMMEKKEEKAPVEDLLPLESSPYVKYKDLEEYKRKGYGAEGHLEPKPNHGGGGTDAPTLSGSGFPEVKPTTIDVVTKQGLI
        SN EEQ Q QMM K EEKAPVEDLLPLESSPYVKYKDLEEYKRKGYG EGHL PKPN  GGGTDAPTLSGSG PEV+PTTID+VTKQGLI
Subjt:  SNNEEQPQQQMMEKKEEKAPVEDLLPLESSPYVKYKDLEEYKRKGYGAEGHLEPKPNHGGGGTDAPTLSGSGFPEVKPTTIDVVTKQGLI

XP_022135734.1 uncharacterized protein LOC111007621 [Momordica charantia]1.3e-2876.29Show/hide
Query:  EKRSNNEEQPQQQMMEKK-EEKAPVEDLLPLESSPYVKYKDLEEYKRKGYGAEGHLEPKPN--HGGGGTDAPTLSGSGFPEVKPTTIDVVTKQGLIP
        E+++  + QPQ + M K+ EEKA VE+LLPLESSPYVKYKDLEEYKR+GYGAEGHLEPKPN   GGGGTDAPTLSG+GFPEVKP+TIDV T QGLIP
Subjt:  EKRSNNEEQPQQQMMEKK-EEKAPVEDLLPLESSPYVKYKDLEEYKRKGYGAEGHLEPKPN--HGGGGTDAPTLSGSGFPEVKPTTIDVVTKQGLIP

XP_022937316.1 uncharacterized protein LOC111443639 [Cucurbita moschata]2.7e-2980Show/hide
Query:  SNNEEQPQQQMMEKKEEKAPVEDLLPLESSPYVKYKDLEEYKRKGYGAEGHLEPKPNHGGGGTDAPTLSGSGFPEVKPTTIDVVTKQGLI
        S  E+Q QQQ++ +KEEK  VE+LLPLESSPYVKYKDLEEYKRKGYGAEGHLEPKPN  GGGTDAPTLSGSGFPEVKP TID VT  GL+
Subjt:  SNNEEQPQQQMMEKKEEKAPVEDLLPLESSPYVKYKDLEEYKRKGYGAEGHLEPKPNHGGGGTDAPTLSGSGFPEVKPTTIDVVTKQGLI

XP_023535424.1 uncharacterized protein LOC111796868 [Cucurbita pepo subsp. pepo]5.4e-3081.11Show/hide
Query:  SNNEEQPQQQMMEKKEEKAPVEDLLPLESSPYVKYKDLEEYKRKGYGAEGHLEPKPNHGGGGTDAPTLSGSGFPEVKPTTIDVVTKQGLI
        S  E+Q QQQ++ +KEEKA VE+LLPLESSPYVKYKDLEEYKRKGYGAEGHLEPKPN  GGGTDAPTLSGSGFPEVKP TID VT  GL+
Subjt:  SNNEEQPQQQMMEKKEEKAPVEDLLPLESSPYVKYKDLEEYKRKGYGAEGHLEPKPNHGGGGTDAPTLSGSGFPEVKPTTIDVVTKQGLI

TrEMBL top hitse value%identityAlignment
A0A0A0L5Y6 Uncharacterized protein8.4e-2990.67Show/hide
Query:  EEKAPVEDLLPLESSPYVKYKDLEEYKRKGYGAEGHLEPKPNHGGGGTDAPTLSGSGFPEVKPTTIDVVTKQGLI
        EEKAPVEDLLPLESSPYVKYKDLEEYKRKGYG EGHL PKPN  GGGTDAPTLSGSG PEV+PTTID+VTKQGLI
Subjt:  EEKAPVEDLLPLESSPYVKYKDLEEYKRKGYGAEGHLEPKPNHGGGGTDAPTLSGSGFPEVKPTTIDVVTKQGLI

A0A438ET15 Uncharacterized protein9.1e-1551.11Show/hide
Query:  RSNNEEQPQQQMMEKKEEKAPVEDLLPLESSPYVKYKDLEEYKRKGYGAEGHLEPKPNHGGGGTDAPTLSGSGFPEVKPTTIDVVTKQGL
        +S  + + + +  E+ EEKA     LP+ESSPY+KY DLE+YKR+GYG EGHLEPKPN GGGGTDAPTL+G+   +   + +D   + G+
Subjt:  RSNNEEQPQQQMMEKKEEKAPVEDLLPLESSPYVKYKDLEEYKRKGYGAEGHLEPKPNHGGGGTDAPTLSGSGFPEVKPTTIDVVTKQGL

A0A5A7V8I8 Late embryogenesis abundant protein group 8 protein4.3e-3390.8Show/hide
Query:  EEQPQQQMMEKKEEKAPVEDLLPLESSPYVKYKDLEEYKRKGYGAEGHLEPKPNHGGGGTDAPTLSGSGFPEVKPTTIDVVTKQGLI
        EEQ Q QMM K EEKAPVEDLLPLESSPYVKYKDLEEYKRKGYGAEGHLEPKPN  GGGTDAPTLSGSG+PEV+PTTIDVVTKQGLI
Subjt:  EEQPQQQMMEKKEEKAPVEDLLPLESSPYVKYKDLEEYKRKGYGAEGHLEPKPNHGGGGTDAPTLSGSGFPEVKPTTIDVVTKQGLI

A0A6J1C2A9 uncharacterized protein LOC1110076216.5e-2976.29Show/hide
Query:  EKRSNNEEQPQQQMMEKK-EEKAPVEDLLPLESSPYVKYKDLEEYKRKGYGAEGHLEPKPN--HGGGGTDAPTLSGSGFPEVKPTTIDVVTKQGLIP
        E+++  + QPQ + M K+ EEKA VE+LLPLESSPYVKYKDLEEYKR+GYGAEGHLEPKPN   GGGGTDAPTLSG+GFPEVKP+TIDV T QGLIP
Subjt:  EKRSNNEEQPQQQMMEKK-EEKAPVEDLLPLESSPYVKYKDLEEYKRKGYGAEGHLEPKPN--HGGGGTDAPTLSGSGFPEVKPTTIDVVTKQGLIP

A0A6J1FA12 uncharacterized protein LOC1114436391.3e-2980Show/hide
Query:  SNNEEQPQQQMMEKKEEKAPVEDLLPLESSPYVKYKDLEEYKRKGYGAEGHLEPKPNHGGGGTDAPTLSGSGFPEVKPTTIDVVTKQGLI
        S  E+Q QQQ++ +KEEK  VE+LLPLESSPYVKYKDLEEYKRKGYGAEGHLEPKPN  GGGTDAPTLSGSGFPEVKP TID VT  GL+
Subjt:  SNNEEQPQQQMMEKKEEKAPVEDLLPLESSPYVKYKDLEEYKRKGYGAEGHLEPKPNHGGGGTDAPTLSGSGFPEVKPTTIDVVTKQGLI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G23110.1 Late embryogenesis abundant protein, group 62.5e-0939.56Show/hide
Query:  EEQPQQQMMEKKEEKAPVEDLLPLESSPYVKYKDLEEYKRKGYGAEGHLEPKPNHGGGGTDAPTLS-----GSGFPEVKPTTIDVVTKQGL
        E+Q +    E++ ++   +DL  ++ +PY+ Y +LE+YK KGYGA+GH EPK   GGG TDAPT S     G G      ++ D + +QG+
Subjt:  EEQPQQQMMEKKEEKAPVEDLLPLESSPYVKYKDLEEYKRKGYGAEGHLEPKPNHGGGGTDAPTLS-----GSGFPEVKPTTIDVVTKQGL

AT2G23110.2 Late embryogenesis abundant protein, group 62.5e-0939.56Show/hide
Query:  EEQPQQQMMEKKEEKAPVEDLLPLESSPYVKYKDLEEYKRKGYGAEGHLEPKPNHGGGGTDAPTLS-----GSGFPEVKPTTIDVVTKQGL
        E+Q +    E++ ++   +DL  ++ +PY+ Y +LE+YK KGYGA+GH EPK   GGG TDAPT S     G G      ++ D + +QG+
Subjt:  EEQPQQQMMEKKEEKAPVEDLLPLESSPYVKYKDLEEYKRKGYGAEGHLEPKPNHGGGGTDAPTLS-----GSGFPEVKPTTIDVVTKQGL

AT2G23120.1 Late embryogenesis abundant protein, group 62.8e-0858.62Show/hide
Query:  EKKEEKAPVEDLLPLESSPYVKYKDLEEYKRKGYGAEGHLEPKPNHGGGGTDAPTLSG
        EKK E+    D LP + SPY+    LE+YK K YGAEGH EP P  GGG TDAPT SG
Subjt:  EKKEEKAPVEDLLPLESSPYVKYKDLEEYKRKGYGAEGHLEPKPNHGGGGTDAPTLSG

AT2G33690.1 Late embryogenesis abundant protein, group 64.9e-1357.14Show/hide
Query:  MEKKEEKAPVEDLLPLESSPYVKYKDLEEYKRKGYGAEGHLEPKPNHGGGGTDAPTLSGSGFP
        M K EEK      LPLE+SPY KY+D+E+YK+  YG  GH + KP HGGG TDAPT SG   P
Subjt:  MEKKEEKAPVEDLLPLESSPYVKYKDLEEYKRKGYGAEGHLEPKPNHGGGGTDAPTLSGSGFP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAAAAGGTCGAATAACGAAGAGCAACCACAGCAGCAAATGATGGAGAAGAAAGAAGAGAAAGCTCCGGTGGAAGATTTGCTGCCATTGGAGAGCAGTCCGTACGT
GAAATATAAGGACTTGGAAGAGTATAAAAGGAAAGGATATGGGGCGGAGGGGCATCTTGAGCCCAAGCCCAATCACGGCGGCGGCGGCACTGACGCACCCACTTTGTCCG
GCAGCGGCTTCCCGGAGGTGAAGCCCACCACCATTGACGTCGTCACCAAACAAGGCCTTATTCCCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGAAAAGGTCGAATAACGAAGAGCAACCACAGCAGCAAATGATGGAGAAGAAAGAAGAGAAAGCTCCGGTGGAAGATTTGCTGCCATTGGAGAGCAGTCCGTACGT
GAAATATAAGGACTTGGAAGAGTATAAAAGGAAAGGATATGGGGCGGAGGGGCATCTTGAGCCCAAGCCCAATCACGGCGGCGGCGGCACTGACGCACCCACTTTGTCCG
GCAGCGGCTTCCCGGAGGTGAAGCCCACCACCATTGACGTCGTCACCAAACAAGGCCTTATTCCCTGA
Protein sequenceShow/hide protein sequence
MEKRSNNEEQPQQQMMEKKEEKAPVEDLLPLESSPYVKYKDLEEYKRKGYGAEGHLEPKPNHGGGGTDAPTLSGSGFPEVKPTTIDVVTKQGLIP