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HG10013904 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10013904
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionMediator of RNA polymerase II transcription subunit 26
Genome locationChr02:5881974..5882273
RNA-Seq ExpressionHG10013904
SyntenyHG10013904
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6591229.1 hypothetical protein SDJN03_13575, partial [Cucurbita argyrosperma subsp. sororia]2.5e-3885.86Show/hide
Query:  MESNQKIEMEREQQRREESKKMEQQQPHYISPMKPLTESAYGGGMYGAEEGEQRSLQKKPASETQSADGPAEAEMKPKHAPPPSSGDRDIDITGQSYFQ
        ME+NQK+EMEREQQRREE+KK+EQ+ PHYISPM+PLTESAYGGGMYG EEG+Q+SLQKKPAS+TQSADGP E+ MKPKHAPPPSSGDRDIDITGQSYFQ
Subjt:  MESNQKIEMEREQQRREESKKMEQQQPHYISPMKPLTESAYGGGMYGAEEGEQRSLQKKPASETQSADGPAEAEMKPKHAPPPSSGDRDIDITGQSYFQ
XP_008452943.1 PREDICTED: uncharacterized protein LOC103493802 [Cucumis melo]1.1e-3381.19Show/hide
Query:  MESNQKIEMEREQQRREESKKMEQQQPHYISPMKPLTESAYGGGMYGAEEGEQRSLQKK--PASETQSADGPAEAEMKPKHAPPPSSGDRDIDITGQSYF
        ME+ Q+IEMEREQQRRE+SKK+EQ+ P+YISPM+PLTESAYGGGMYG EEG+Q SLQ K  PAS+TQSADGP EAEMK KH PPPSSGDRDIDITGQSYF
Subjt:  MESNQKIEMEREQQRREESKKMEQQQPHYISPMKPLTESAYGGGMYGAEEGEQRSLQKK--PASETQSADGPAEAEMKPKHAPPPSSGDRDIDITGQSYF

Query:  Q
        Q
Subjt:  Q
XP_022132786.1 uncharacterized protein LOC111005558 [Momordica charantia]3.1e-3685.86Show/hide
Query:  MESNQKIEMEREQQRREESKKMEQQQPHYISPMKPLTESAYGGGMYGAEEGEQRSLQKKPASETQSADGPAEAEMKPKHAPPPSSGDRDIDITGQSYFQ
        ME NQKIEMERE+QRREE+KKMEQQ P  ISPM+PLTESAYGGGMYGAEEG+Q+ L+KKPAS+TQSADGP EA MKPKHAPPPSSGDRDIDITGQSYFQ
Subjt:  MESNQKIEMEREQQRREESKKMEQQQPHYISPMKPLTESAYGGGMYGAEEGEQRSLQKKPASETQSADGPAEAEMKPKHAPPPSSGDRDIDITGQSYFQ
XP_022936823.1 uncharacterized protein LOC111443294 [Cucurbita moschata]8.7e-3986.87Show/hide
Query:  MESNQKIEMEREQQRREESKKMEQQQPHYISPMKPLTESAYGGGMYGAEEGEQRSLQKKPASETQSADGPAEAEMKPKHAPPPSSGDRDIDITGQSYFQ
        ME+NQK+EMEREQQRREE+KK+EQ+ PHYISPM+PLTESAYGGGMYGAEEG+Q+SLQKKPAS+TQSADGP E+ MKPKHAPPPSSGDRDIDITGQSYFQ
Subjt:  MESNQKIEMEREQQRREESKKMEQQQPHYISPMKPLTESAYGGGMYGAEEGEQRSLQKKPASETQSADGPAEAEMKPKHAPPPSSGDRDIDITGQSYFQ
XP_038899828.1 uncharacterized protein LOC120087055 [Benincasa hispida]2.4e-4193.94Show/hide
Query:  MESNQKIEMEREQQRREESKKMEQQQPHYISPMKPLTESAYGGGMYGAEEGEQRSLQKKPASETQSADGPAEAEMKPKHAPPPSSGDRDIDITGQSYFQ
        MESNQK+EMEREQQRREESKKMEQQ PHYISPMKPLTESAYGGGMYG EEGE+RSLQKKPASETQSADGP E EMKPKHAPPPSSGDRDIDITGQSYFQ
Subjt:  MESNQKIEMEREQQRREESKKMEQQQPHYISPMKPLTESAYGGGMYGAEEGEQRSLQKKPASETQSADGPAEAEMKPKHAPPPSSGDRDIDITGQSYFQ
TrEMBL top hitse value%identityAlignment
A0A0A0L393 Uncharacterized protein1.8e-2977.45Show/hide
Query:  MESNQKIEMEREQQRREESKKMEQQQPHYISPMKPLTESAYGGGMYGAEE-GEQRSLQ--KKPASETQSADGPAEAEMKPKHAPPPSSGDRDIDITGQSY
        ME+ QKIEMEREQQRREESKK+EQ+ P+YIS M+PLTE AYGGGMYG ++ G+Q SLQ  K PAS TQSADGP  AEMK KH PPPSSGDRDIDITGQSY
Subjt:  MESNQKIEMEREQQRREESKKMEQQQPHYISPMKPLTESAYGGGMYGAEE-GEQRSLQ--KKPASETQSADGPAEAEMKPKHAPPPSSGDRDIDITGQSY

Query:  FQ
        FQ
Subjt:  FQ
A0A1S3BV26 uncharacterized protein LOC1034938025.3e-3481.19Show/hide
Query:  MESNQKIEMEREQQRREESKKMEQQQPHYISPMKPLTESAYGGGMYGAEEGEQRSLQKK--PASETQSADGPAEAEMKPKHAPPPSSGDRDIDITGQSYF
        ME+ Q+IEMEREQQRRE+SKK+EQ+ P+YISPM+PLTESAYGGGMYG EEG+Q SLQ K  PAS+TQSADGP EAEMK KH PPPSSGDRDIDITGQSYF
Subjt:  MESNQKIEMEREQQRREESKKMEQQQPHYISPMKPLTESAYGGGMYGAEEGEQRSLQKK--PASETQSADGPAEAEMKPKHAPPPSSGDRDIDITGQSYF

Query:  Q
        Q
Subjt:  Q
A0A6J1BT98 uncharacterized protein LOC1110055581.5e-3685.86Show/hide
Query:  MESNQKIEMEREQQRREESKKMEQQQPHYISPMKPLTESAYGGGMYGAEEGEQRSLQKKPASETQSADGPAEAEMKPKHAPPPSSGDRDIDITGQSYFQ
        ME NQKIEMERE+QRREE+KKMEQQ P  ISPM+PLTESAYGGGMYGAEEG+Q+ L+KKPAS+TQSADGP EA MKPKHAPPPSSGDRDIDITGQSYFQ
Subjt:  MESNQKIEMEREQQRREESKKMEQQQPHYISPMKPLTESAYGGGMYGAEEGEQRSLQKKPASETQSADGPAEAEMKPKHAPPPSSGDRDIDITGQSYFQ
A0A6J1FEB2 uncharacterized protein LOC1114432944.2e-3986.87Show/hide
Query:  MESNQKIEMEREQQRREESKKMEQQQPHYISPMKPLTESAYGGGMYGAEEGEQRSLQKKPASETQSADGPAEAEMKPKHAPPPSSGDRDIDITGQSYFQ
        ME+NQK+EMEREQQRREE+KK+EQ+ PHYISPM+PLTESAYGGGMYGAEEG+Q+SLQKKPAS+TQSADGP E+ MKPKHAPPPSSGDRDIDITGQSYFQ
Subjt:  MESNQKIEMEREQQRREESKKMEQQQPHYISPMKPLTESAYGGGMYGAEEGEQRSLQKKPASETQSADGPAEAEMKPKHAPPPSSGDRDIDITGQSYFQ
A0A6J1IJZ9 uncharacterized protein LOC1114769714.2e-3986.87Show/hide
Query:  MESNQKIEMEREQQRREESKKMEQQQPHYISPMKPLTESAYGGGMYGAEEGEQRSLQKKPASETQSADGPAEAEMKPKHAPPPSSGDRDIDITGQSYFQ
        ME+NQK+EMEREQQRREE+KK+EQ+ PHYISPM+PLTESAYGGGMYGAEEG+Q+SLQKKPAS+TQSADGP E+ MKPKHAPPPSSGDRDIDITGQSYFQ
Subjt:  MESNQKIEMEREQQRREESKKMEQQQPHYISPMKPLTESAYGGGMYGAEEGEQRSLQKKPASETQSADGPAEAEMKPKHAPPPSSGDRDIDITGQSYFQ
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G42290.1 transcription activator-related3.8e-1649.09Show/hide
Query:  IEMEREQQRREESKKME--QQQPHYISPMKPLTESAYGGGMYGAE--------EGEQRSLQKK------PASETQSADGPAEAE-MKPKHAPPPSSGDRD
        +E E +Q+  E   K E  Q QP YIS M+P+T  AYGGG+YG +        E E ++++K+      PAS+TQSADGP E + + PKH  P SSGDRD
Subjt:  IEMEREQQRREESKKME--QQQPHYISPMKPLTESAYGGGMYGAE--------EGEQRSLQKK------PASETQSADGPAEAE-MKPKHAPPPSSGDRD

Query:  IDITGQSYFQ
        +DITGQSY Q
Subjt:  IDITGQSYFQ

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAAGCAATCAAAAGATAGAGATGGAGAGGGAGCAGCAGAGGCGAGAAGAATCGAAGAAGATGGAGCAACAACAGCCGCACTATATTTCTCCGATGAAGCCATTGAC
GGAAAGTGCTTACGGCGGAGGAATGTACGGCGCCGAGGAAGGCGAACAGCGAAGCCTGCAGAAGAAACCTGCGAGCGAGACGCAGAGCGCCGATGGACCTGCTGAAGCCG
AGATGAAGCCGAAGCATGCGCCTCCACCGTCCTCCGGCGACAGAGACATCGACATCACCGGGCAATCGTATTTCCAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAAAGCAATCAAAAGATAGAGATGGAGAGGGAGCAGCAGAGGCGAGAAGAATCGAAGAAGATGGAGCAACAACAGCCGCACTATATTTCTCCGATGAAGCCATTGAC
GGAAAGTGCTTACGGCGGAGGAATGTACGGCGCCGAGGAAGGCGAACAGCGAAGCCTGCAGAAGAAACCTGCGAGCGAGACGCAGAGCGCCGATGGACCTGCTGAAGCCG
AGATGAAGCCGAAGCATGCGCCTCCACCGTCCTCCGGCGACAGAGACATCGACATCACCGGGCAATCGTATTTCCAGTAG
Protein sequenceShow/hide protein sequence
MESNQKIEMEREQQRREESKKMEQQQPHYISPMKPLTESAYGGGMYGAEEGEQRSLQKKPASETQSADGPAEAEMKPKHAPPPSSGDRDIDITGQSYFQ