CuGenDBv2

Gene ID	HG10013914
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	tRNA pseudouridine synthase A
Genome location	Chr02:5997967..5999628
RNA-Seq Expression	HG10013914
Synteny	HG10013914
Gene Ontology terms	GO:0031119 - tRNA pseudouridine synthesis (biological process) GO:1990481 - mRNA pseudouridine synthesis (biological process) GO:0005634 - nucleus (cellular component) GO:0003723 - RNA binding (molecular function) GO:0009982 - pseudouridine synthase activity (molecular function)
InterPro domains	IPR001406 - Pseudouridine synthase I, TruA IPR020094 - Pseudouridine synthase TruA/RsuA/RluB/E/F, N-terminal IPR020095 - Pseudouridine synthase I, TruA, C-terminal IPR020097 - Pseudouridine synthase I, TruA, alpha/beta domain IPR020103 - Pseudouridine synthase, catalytic domain superfamily IPR041708 - Pseudouridine synthase PUS1/ PUS2-like

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004145528.1 tRNA pseudouridine synthase A [Cucumis sativus]

5.4e-273

93.45

Show/hide

Query:  MEKEPPTETRRSPPQPLIEEPDPKKLKMSSTTTTSDDEGVNSNSEAPKKQRYKRRKIAIFFAYCGVGYQGMQKNPGAKTIEADLEEALYLAGAVPEQDRG
        ME+EPPTETRRSPPQPLIEEP PKKLKMSSTTTTSDDE VNSNS APKKQRYKRRK+AIFFAYCGVGYQGMQKNPGAKTIEADLEEALYLAGAVPEQDRG
Subjt:  MEKEPPTETRRSPPQPLIEEPDPKKLKMSSTTTTSDDEGVNSNSEAPKKQRYKRRKIAIFFAYCGVGYQGMQKNPGAKTIEADLEEALYLAGAVPEQDRG

Query:  LSKRYDWARSARTDKGVSAVGQVVSGRFYIDPPGFVDRLNLNLSPQILIFGYKRVTASFNAKKFCDRRRYVYLIPVFALDPNCHRDRESVKASLGSDNEL
        LSKRYDWARSARTDKGVSAVGQVVSGRFYIDPPGFVDRLN NLSPQI IFGYKRVTASFNAKKFCDRRRYVYLIPVFALDPNCHRDRESVKASLGSDNEL
Subjt:  LSKRYDWARSARTDKGVSAVGQVVSGRFYIDPPGFVDRLNLNLSPQILIFGYKRVTASFNAKKFCDRRRYVYLIPVFALDPNCHRDRESVKASLGSDNEL

Query:  VKCLECSERGRKVEGLMGKRNFEVKTVITESDISSNTGTAIEVSDIQENRVLEDNATTSDSNKQTSVLVENSCTELNVGSEGTAKSEGSYMSGLGNDSEI
        VKCLECSERGRKVEGL+GKRNFEVKT ITESDISSNT  AIEVSD+Q N VLED+ATTSDSNKQTSVLVEN+ TELNVGSEGTAKSE S MSGLG+DSEI
Subjt:  VKCLECSERGRKVEGLMGKRNFEVKTVITESDISSNTGTAIEVSDIQENRVLEDNATTSDSNKQTSVLVENSCTELNVGSEGTAKSEGSYMSGLGNDSEI

Query:  VVSKESVNRNEKPSGSFKYGEEEKARFNRILKNYVGTHNFHNFTTRTKAEDPAAHRFIVSFDASNTVVVEGIEFVKCEVVGQSFMLHQIRKMMGLAVAIM
        VVSKESVN  EK SGSFKYGEEEKARFNRILK+YVGTHNFHNFTTRTKAEDPAA RFIVSFDAS  VVVEGIEFVKCEVVGQSFMLHQIRKMMGLAVAIM
Subjt:  VVSKESVNRNEKPSGSFKYGEEEKARFNRILKNYVGTHNFHNFTTRTKAEDPAAHRFIVSFDASNTVVVEGIEFVKCEVVGQSFMLHQIRKMMGLAVAIM

Query:  RNCAPESLIEKALQKDVNINVPTAPEVGLYLDECLFTSYNQKWKDSHEEVSMKAYEEVAEDFKMKQIYSHIASTEHKDGAVALWLHSLNHRNYPDLRVVD
        RNCAPESLIEKALQKDVNINVPTAPEVGLYLDECLFTSYNQKWKD+HEEVSMKAYEE AEDFKMKQIYSHIASTEHKDGAVALWLHSLNHRNYPDLRV+D
Subjt:  RNCAPESLIEKALQKDVNINVPTAPEVGLYLDECLFTSYNQKWKDSHEEVSMKAYEEVAEDFKMKQIYSHIASTEHKDGAVALWLHSLNHRNYPDLRVVD

Query:  EVAEIAKNTSVAMETQAET
        EVA+IAKN S+ METQAET
Subjt:  EVAEIAKNTSVAMETQAET

XP_008452911.1 PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like [Cucumis melo]

3.4e-275

94.22

Show/hide

Query:  MEKEPPTETRRSPPQPLIEEPDPKKLKMSSTTTTSDDEGVNSNSEAPKKQRYKRRKIAIFFAYCGVGYQGMQKNPGAKTIEADLEEALYLAGAVPEQDRG
        ME+EPPTETRRSPPQPLIEEPDPKKLKMSSTTTTSDDE VNSNS APKKQRYKRRK+AIFFAYCGVGYQGMQKNPGAKTIEADLEEALYLAGAVPEQDRG
Subjt:  MEKEPPTETRRSPPQPLIEEPDPKKLKMSSTTTTSDDEGVNSNSEAPKKQRYKRRKIAIFFAYCGVGYQGMQKNPGAKTIEADLEEALYLAGAVPEQDRG

Query:  LSKRYDWARSARTDKGVSAVGQVVSGRFYIDPPGFVDRLNLNLSPQILIFGYKRVTASFNAKKFCDRRRYVYLIPVFALDPNCHRDRESVKASLGSDNEL
        LSKRYDWARSARTDKGVSAVGQVVSGRFYIDPPGFVDRLN NLSPQI IFGYKRVTASFNAKKFCDRRRYVYLIPVFALDPNCHRDRESVKASLGSDNEL
Subjt:  LSKRYDWARSARTDKGVSAVGQVVSGRFYIDPPGFVDRLNLNLSPQILIFGYKRVTASFNAKKFCDRRRYVYLIPVFALDPNCHRDRESVKASLGSDNEL

Query:  VKCLECSERGRKVEGLMGKRNFEVKTVITESDISSNTGTAIEVSDIQENRVLEDNATTSDSNKQTSVLVENSCTELNVGSEGTAKSEGSYMSGLGNDSEI
        VKCLECSERGRKVEGLMGKRNFEVKT ITESDISSN   AIEVSD+Q N VLED+ATTSDSNKQTSVLVEN+ TEL V SEG AKSE S MSGLGNDSEI
Subjt:  VKCLECSERGRKVEGLMGKRNFEVKTVITESDISSNTGTAIEVSDIQENRVLEDNATTSDSNKQTSVLVENSCTELNVGSEGTAKSEGSYMSGLGNDSEI

Query:  VVSKESVNRNEKPSGSFKYGEEEKARFNRILKNYVGTHNFHNFTTRTKAEDPAAHRFIVSFDASNTVVVEGIEFVKCEVVGQSFMLHQIRKMMGLAVAIM
        VVSKESVN  EKPSGSFKYGEEEKARFNRILK+YVGTHNFHNFTTRTKAEDPAA RFIVSFDAS TVVVEGIEFVKCEVVGQSFMLHQIRKMMGLAVAIM
Subjt:  VVSKESVNRNEKPSGSFKYGEEEKARFNRILKNYVGTHNFHNFTTRTKAEDPAAHRFIVSFDASNTVVVEGIEFVKCEVVGQSFMLHQIRKMMGLAVAIM

Query:  RNCAPESLIEKALQKDVNINVPTAPEVGLYLDECLFTSYNQKWKDSHEEVSMKAYEEVAEDFKMKQIYSHIASTEHKDGAVALWLHSLNHRNYPDLRVVD
        RNCAPESLIEKALQKDVNINVPTAPEVGLYLDECLFTSYNQKWKD+HEEVSMKAYEEVAEDFKMKQIYSHIASTEHKDGAVALWLHSLNHRNYPDLRV+D
Subjt:  RNCAPESLIEKALQKDVNINVPTAPEVGLYLDECLFTSYNQKWKDSHEEVSMKAYEEVAEDFKMKQIYSHIASTEHKDGAVALWLHSLNHRNYPDLRVVD

Query:  EVAEIAKNTSVAMETQAET
        EVA+IAKNTSV METQAET
Subjt:  EVAEIAKNTSVAMETQAET

XP_022936288.1 tRNA pseudouridine synthase A [Cucurbita moschata]

2.4e-265

90.96

Show/hide

Query:  MEKEPPTETRRSPPQPLIEEPDPKKLKMSSTTTTSDDEGVNSNSEAPKKQRYKRRKIAIFFAYCGVGYQGMQKNPGAKTIEADLEEALYLAGAVPEQDRG
        ME+EPPT+TRRSPPQP IEEP+PKKLKMSSTTTTSDDE VNSNS APKKQRYKRRKIAIFFAYCGVGYQGMQKNPGAKTIEADLEEALYLAGAVPEQDRG
Subjt:  MEKEPPTETRRSPPQPLIEEPDPKKLKMSSTTTTSDDEGVNSNSEAPKKQRYKRRKIAIFFAYCGVGYQGMQKNPGAKTIEADLEEALYLAGAVPEQDRG

Query:  LSKRYDWARSARTDKGVSAVGQVVSGRFYIDPPGFVDRLNLNLSPQILIFGYKRVTASFNAKKFCDRRRYVYLIPVFALDPNCHRDRESVKASLGSDNEL
        LSKRYDWARSARTDKGVSAVGQVVSGRFYIDPPGFVDRLN NLSPQI IFGYKRVTASFNAKKFCDRRRYVYLIPVFALDPNCHRDRESVKASLGS NEL
Subjt:  LSKRYDWARSARTDKGVSAVGQVVSGRFYIDPPGFVDRLNLNLSPQILIFGYKRVTASFNAKKFCDRRRYVYLIPVFALDPNCHRDRESVKASLGSDNEL

Query:  VKCLECSERGRKVEGLMGKRNFEVKTVITESDISSNTGTAIEVSDIQENRVLEDNATTSDSNKQTSVLVENSCTELNVGSEGTAKSEGSYMSGLGNDSEI
        VKCLECSERGRKVEGLMGKRNFEVKT I+ESDIS N+G AIEV D+Q N  LEDNAT SDS K+TSVLVENS TELNVG E TAK EGS MSGLGNDSE 
Subjt:  VKCLECSERGRKVEGLMGKRNFEVKTVITESDISSNTGTAIEVSDIQENRVLEDNATTSDSNKQTSVLVENSCTELNVGSEGTAKSEGSYMSGLGNDSEI

Query:  VVSKESVNRNEKPSGSFKYGEEEKARFNRILKNYVGTHNFHNFTTRTKAEDPAAHRFIVSFDASNTVVVEGIEFVKCEVVGQSFMLHQIRKMMGLAVAIM
        V SKESVNRNEK SGSFKYGEEEKARFNRILK YVGTHNFHNFTTRTKAEDPAA RFI+SFDA+ TVVVEGIEFVKCEVVGQSFMLHQIRKMMGLAVAIM
Subjt:  VVSKESVNRNEKPSGSFKYGEEEKARFNRILKNYVGTHNFHNFTTRTKAEDPAAHRFIVSFDASNTVVVEGIEFVKCEVVGQSFMLHQIRKMMGLAVAIM

Query:  RNCAPESLIEKALQKDVNINVPTAPEVGLYLDECLFTSYNQKWKDSHEEVSMKAYEEVAEDFKMKQIYSHIASTEHKDGAVALWLHSLNHRNYPDLRVVD
        RNCAPESLIEKALQ+DVNINVPTAPEVGLYLDECLFTSYNQKWKDSHEEVSMKAYEEVAEDFKMK IYSHI STEHK+GAVALWLHSLNHRNYPDLRV D
Subjt:  RNCAPESLIEKALQKDVNINVPTAPEVGLYLDECLFTSYNQKWKDSHEEVSMKAYEEVAEDFKMKQIYSHIASTEHKDGAVALWLHSLNHRNYPDLRVVD

Query:  EVA-EIAKNTSVAMETQAET
        E A + AKNTSV ++TQAET
Subjt:  EVA-EIAKNTSVAMETQAET

XP_022975443.1 tRNA pseudouridine synthase A [Cucurbita maxima]

4.0e-268

91.71

Show/hide

Query:  MEKEPPTETRRSPPQPLIEEPDPKKLKMSSTTTTSDDEGVNSNSEAPKKQRYKRRKIAIFFAYCGVGYQGMQKNPGAKTIEADLEEALYLAGAVPEQDRG
        ME+EPPT+TRRSPPQP IEEP+PKKLKMSSTTTTSDDE VNSNS APKKQRYKRRKIAIFFAYCGVGYQGMQKNPGAKTIEADLEEALYLAGAVPEQDRG
Subjt:  MEKEPPTETRRSPPQPLIEEPDPKKLKMSSTTTTSDDEGVNSNSEAPKKQRYKRRKIAIFFAYCGVGYQGMQKNPGAKTIEADLEEALYLAGAVPEQDRG

Query:  LSKRYDWARSARTDKGVSAVGQVVSGRFYIDPPGFVDRLNLNLSPQILIFGYKRVTASFNAKKFCDRRRYVYLIPVFALDPNCHRDRESVKASLGSDNEL
        LSKRYDWARSARTDKGVSAVGQVVSGRFYIDPPGFVDRLN NLSPQI IFGYKRVTASFNAKKFCDRRRYVYLIPVFALDPNCHRDRESVKASLGS NEL
Subjt:  LSKRYDWARSARTDKGVSAVGQVVSGRFYIDPPGFVDRLNLNLSPQILIFGYKRVTASFNAKKFCDRRRYVYLIPVFALDPNCHRDRESVKASLGSDNEL

Query:  VKCLECSERGRKVEGLMGKRNFEVKTVITESDISSNTGTAIEVSDIQENRVLEDNATTSDSNKQTSVLVENSCTELNVGSEGTAKSEGSYMSGLGNDSEI
        VKCLECSERGRKVEGLMGKRNFEVKT I+ESDIS N G AIEVSD+Q N  LEDNAT SDS K+TSVLVENS TELNVGSE  AKSEGS MSGLGNDSE 
Subjt:  VKCLECSERGRKVEGLMGKRNFEVKTVITESDISSNTGTAIEVSDIQENRVLEDNATTSDSNKQTSVLVENSCTELNVGSEGTAKSEGSYMSGLGNDSEI

Query:  VVSKESVNRNEKPSGSFKYGEEEKARFNRILKNYVGTHNFHNFTTRTKAEDPAAHRFIVSFDASNTVVVEGIEFVKCEVVGQSFMLHQIRKMMGLAVAIM
        VVSK+SVNRNEKPSGSFKYGEEEKARFNRILK YVGTHNFHNFTTRTKAEDPAA RFI+SFDA+ TVVVEG+EFVKCEVVGQSFMLHQIRKMMGLAVAIM
Subjt:  VVSKESVNRNEKPSGSFKYGEEEKARFNRILKNYVGTHNFHNFTTRTKAEDPAAHRFIVSFDASNTVVVEGIEFVKCEVVGQSFMLHQIRKMMGLAVAIM

Query:  RNCAPESLIEKALQKDVNINVPTAPEVGLYLDECLFTSYNQKWKDSHEEVSMKAYEEVAEDFKMKQIYSHIASTEHKDGAVALWLHSLNHRNYPDLRVVD
        RNCAPESLIEKALQ+DVNINVPTAPEVGLYLDECLFTSYNQKWKDSHEEVSMKAYEEVAEDFKMK IYSHI STEHK+GAVALWLHSLNHRNYPDLRV D
Subjt:  RNCAPESLIEKALQKDVNINVPTAPEVGLYLDECLFTSYNQKWKDSHEEVSMKAYEEVAEDFKMKQIYSHIASTEHKDGAVALWLHSLNHRNYPDLRVVD

Query:  EVAEIAKNTSVAMETQAET
        E A+ AKNTSV +ETQAET
Subjt:  EVAEIAKNTSVAMETQAET

XP_038899088.1 tRNA pseudouridine synthase A [Benincasa hispida]

2.8e-277

95.18

Show/hide

Query:  MEKEPPTETRRSPPQPLIEEPDPKKLKMSSTTTTSDDEGVNSNSEAPKKQRYKRRKIAIFFAYCGVGYQGMQKNPGAKTIEADLEEALYLAGAVPEQDRG
        ME+EPPTETR SPPQPLIEEPDPKKLKMSSTTTTSDDE VNS+S APKKQRYKRRK+AIFFAYCGVGYQGMQKNPGAKTIEADLEEALYLAGAVPEQDRG
Subjt:  MEKEPPTETRRSPPQPLIEEPDPKKLKMSSTTTTSDDEGVNSNSEAPKKQRYKRRKIAIFFAYCGVGYQGMQKNPGAKTIEADLEEALYLAGAVPEQDRG

Query:  LSKRYDWARSARTDKGVSAVGQVVSGRFYIDPPGFVDRLNLNLSPQILIFGYKRVTASFNAKKFCDRRRYVYLIPVFALDPNCHRDRESVKASLGSDNEL
        LSKRYDWARSARTDKGVSAVGQVVSGRFYIDPPGFVDRLN NLSPQI IFGYKRVTASFNAKKFCDRRRYVYLIPVFALDPNCHRDRESVKASLGSDNEL
Subjt:  LSKRYDWARSARTDKGVSAVGQVVSGRFYIDPPGFVDRLNLNLSPQILIFGYKRVTASFNAKKFCDRRRYVYLIPVFALDPNCHRDRESVKASLGSDNEL

Query:  VKCLECSERGRKVEGLMGKRNFEVKTVITESDISSNTGTAIEVSDIQENRVLEDNATTSDSNKQTSVLVENSCTELNVGSEGTAKSEGSYMSGLGNDSEI
        VKCLECSERGRKVEGLMGKRNFEVKT I ES ISSNTG AIEVSD+QENRVLEDNAT SDSNKQ+SVLVENSCTELNV SE TAKS GS MSGLGNDSEI
Subjt:  VKCLECSERGRKVEGLMGKRNFEVKTVITESDISSNTGTAIEVSDIQENRVLEDNATTSDSNKQTSVLVENSCTELNVGSEGTAKSEGSYMSGLGNDSEI

Query:  VVSKESVNRNEKPSGSFKYGEEEKARFNRILKNYVGTHNFHNFTTRTKAEDPAAHRFIVSFDASNTVVVEGIEFVKCEVVGQSFMLHQIRKMMGLAVAIM
        VVSKESVN NEKPSGSFKY EEEKARFNRILKNYVGTHNFHNFTTRTKAEDPAA RFIVSFDAS TVVVEGIEFVKCEVVGQSFMLHQIRKMMGLAVAIM
Subjt:  VVSKESVNRNEKPSGSFKYGEEEKARFNRILKNYVGTHNFHNFTTRTKAEDPAAHRFIVSFDASNTVVVEGIEFVKCEVVGQSFMLHQIRKMMGLAVAIM

Query:  RNCAPESLIEKALQKDVNINVPTAPEVGLYLDECLFTSYNQKWKDSHEEVSMKAYEEVAEDFKMKQIYSHIASTEHKDGAVALWLHSLNHRNYPDLRVVD
        RNCAPESLIEKALQKDVNINVPTAPEVGLYLDECLFTSYNQKWKDSHEEVSMKAYEEVAEDFKMKQIYSHIASTEHKDGAVALWLHSLNHRNYPDLR VD
Subjt:  RNCAPESLIEKALQKDVNINVPTAPEVGLYLDECLFTSYNQKWKDSHEEVSMKAYEEVAEDFKMKQIYSHIASTEHKDGAVALWLHSLNHRNYPDLRVVD

Query:  EVAEIAKNTSVAMETQAET
        EVAEIA NTSVAMETQAET
Subjt:  EVAEIAKNTSVAMETQAET

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L0J9 PseudoU_synth_1 domain-containing protein

2.6e-273

93.45

Show/hide

Query:  MEKEPPTETRRSPPQPLIEEPDPKKLKMSSTTTTSDDEGVNSNSEAPKKQRYKRRKIAIFFAYCGVGYQGMQKNPGAKTIEADLEEALYLAGAVPEQDRG
        ME+EPPTETRRSPPQPLIEEP PKKLKMSSTTTTSDDE VNSNS APKKQRYKRRK+AIFFAYCGVGYQGMQKNPGAKTIEADLEEALYLAGAVPEQDRG
Subjt:  MEKEPPTETRRSPPQPLIEEPDPKKLKMSSTTTTSDDEGVNSNSEAPKKQRYKRRKIAIFFAYCGVGYQGMQKNPGAKTIEADLEEALYLAGAVPEQDRG

Query:  LSKRYDWARSARTDKGVSAVGQVVSGRFYIDPPGFVDRLNLNLSPQILIFGYKRVTASFNAKKFCDRRRYVYLIPVFALDPNCHRDRESVKASLGSDNEL
        LSKRYDWARSARTDKGVSAVGQVVSGRFYIDPPGFVDRLN NLSPQI IFGYKRVTASFNAKKFCDRRRYVYLIPVFALDPNCHRDRESVKASLGSDNEL
Subjt:  LSKRYDWARSARTDKGVSAVGQVVSGRFYIDPPGFVDRLNLNLSPQILIFGYKRVTASFNAKKFCDRRRYVYLIPVFALDPNCHRDRESVKASLGSDNEL

Query:  VKCLECSERGRKVEGLMGKRNFEVKTVITESDISSNTGTAIEVSDIQENRVLEDNATTSDSNKQTSVLVENSCTELNVGSEGTAKSEGSYMSGLGNDSEI
        VKCLECSERGRKVEGL+GKRNFEVKT ITESDISSNT  AIEVSD+Q N VLED+ATTSDSNKQTSVLVEN+ TELNVGSEGTAKSE S MSGLG+DSEI
Subjt:  VKCLECSERGRKVEGLMGKRNFEVKTVITESDISSNTGTAIEVSDIQENRVLEDNATTSDSNKQTSVLVENSCTELNVGSEGTAKSEGSYMSGLGNDSEI

Query:  VVSKESVNRNEKPSGSFKYGEEEKARFNRILKNYVGTHNFHNFTTRTKAEDPAAHRFIVSFDASNTVVVEGIEFVKCEVVGQSFMLHQIRKMMGLAVAIM
        VVSKESVN  EK SGSFKYGEEEKARFNRILK+YVGTHNFHNFTTRTKAEDPAA RFIVSFDAS  VVVEGIEFVKCEVVGQSFMLHQIRKMMGLAVAIM
Subjt:  VVSKESVNRNEKPSGSFKYGEEEKARFNRILKNYVGTHNFHNFTTRTKAEDPAAHRFIVSFDASNTVVVEGIEFVKCEVVGQSFMLHQIRKMMGLAVAIM

Query:  RNCAPESLIEKALQKDVNINVPTAPEVGLYLDECLFTSYNQKWKDSHEEVSMKAYEEVAEDFKMKQIYSHIASTEHKDGAVALWLHSLNHRNYPDLRVVD
        RNCAPESLIEKALQKDVNINVPTAPEVGLYLDECLFTSYNQKWKD+HEEVSMKAYEE AEDFKMKQIYSHIASTEHKDGAVALWLHSLNHRNYPDLRV+D
Subjt:  RNCAPESLIEKALQKDVNINVPTAPEVGLYLDECLFTSYNQKWKDSHEEVSMKAYEEVAEDFKMKQIYSHIASTEHKDGAVALWLHSLNHRNYPDLRVVD

Query:  EVAEIAKNTSVAMETQAET
        EVA+IAKN S+ METQAET
Subjt:  EVAEIAKNTSVAMETQAET

A0A1S3BV07 tRNA pseudouridine synthase A, mitochondrial-like

1.6e-275

94.22

Show/hide

Query:  MEKEPPTETRRSPPQPLIEEPDPKKLKMSSTTTTSDDEGVNSNSEAPKKQRYKRRKIAIFFAYCGVGYQGMQKNPGAKTIEADLEEALYLAGAVPEQDRG
        ME+EPPTETRRSPPQPLIEEPDPKKLKMSSTTTTSDDE VNSNS APKKQRYKRRK+AIFFAYCGVGYQGMQKNPGAKTIEADLEEALYLAGAVPEQDRG
Subjt:  MEKEPPTETRRSPPQPLIEEPDPKKLKMSSTTTTSDDEGVNSNSEAPKKQRYKRRKIAIFFAYCGVGYQGMQKNPGAKTIEADLEEALYLAGAVPEQDRG

Query:  LSKRYDWARSARTDKGVSAVGQVVSGRFYIDPPGFVDRLNLNLSPQILIFGYKRVTASFNAKKFCDRRRYVYLIPVFALDPNCHRDRESVKASLGSDNEL
        LSKRYDWARSARTDKGVSAVGQVVSGRFYIDPPGFVDRLN NLSPQI IFGYKRVTASFNAKKFCDRRRYVYLIPVFALDPNCHRDRESVKASLGSDNEL
Subjt:  LSKRYDWARSARTDKGVSAVGQVVSGRFYIDPPGFVDRLNLNLSPQILIFGYKRVTASFNAKKFCDRRRYVYLIPVFALDPNCHRDRESVKASLGSDNEL

Query:  VKCLECSERGRKVEGLMGKRNFEVKTVITESDISSNTGTAIEVSDIQENRVLEDNATTSDSNKQTSVLVENSCTELNVGSEGTAKSEGSYMSGLGNDSEI
        VKCLECSERGRKVEGLMGKRNFEVKT ITESDISSN   AIEVSD+Q N VLED+ATTSDSNKQTSVLVEN+ TEL V SEG AKSE S MSGLGNDSEI
Subjt:  VKCLECSERGRKVEGLMGKRNFEVKTVITESDISSNTGTAIEVSDIQENRVLEDNATTSDSNKQTSVLVENSCTELNVGSEGTAKSEGSYMSGLGNDSEI

Query:  VVSKESVNRNEKPSGSFKYGEEEKARFNRILKNYVGTHNFHNFTTRTKAEDPAAHRFIVSFDASNTVVVEGIEFVKCEVVGQSFMLHQIRKMMGLAVAIM
        VVSKESVN  EKPSGSFKYGEEEKARFNRILK+YVGTHNFHNFTTRTKAEDPAA RFIVSFDAS TVVVEGIEFVKCEVVGQSFMLHQIRKMMGLAVAIM
Subjt:  VVSKESVNRNEKPSGSFKYGEEEKARFNRILKNYVGTHNFHNFTTRTKAEDPAAHRFIVSFDASNTVVVEGIEFVKCEVVGQSFMLHQIRKMMGLAVAIM

Query:  RNCAPESLIEKALQKDVNINVPTAPEVGLYLDECLFTSYNQKWKDSHEEVSMKAYEEVAEDFKMKQIYSHIASTEHKDGAVALWLHSLNHRNYPDLRVVD
        RNCAPESLIEKALQKDVNINVPTAPEVGLYLDECLFTSYNQKWKD+HEEVSMKAYEEVAEDFKMKQIYSHIASTEHKDGAVALWLHSLNHRNYPDLRV+D
Subjt:  RNCAPESLIEKALQKDVNINVPTAPEVGLYLDECLFTSYNQKWKDSHEEVSMKAYEEVAEDFKMKQIYSHIASTEHKDGAVALWLHSLNHRNYPDLRVVD

Query:  EVAEIAKNTSVAMETQAET
        EVA+IAKNTSV METQAET
Subjt:  EVAEIAKNTSVAMETQAET

A0A5A7VBT0 tRNA pseudouridine synthase A

1.6e-275

94.22

Show/hide

Query:  MEKEPPTETRRSPPQPLIEEPDPKKLKMSSTTTTSDDEGVNSNSEAPKKQRYKRRKIAIFFAYCGVGYQGMQKNPGAKTIEADLEEALYLAGAVPEQDRG
        ME+EPPTETRRSPPQPLIEEPDPKKLKMSSTTTTSDDE VNSNS APKKQRYKRRK+AIFFAYCGVGYQGMQKNPGAKTIEADLEEALYLAGAVPEQDRG
Subjt:  MEKEPPTETRRSPPQPLIEEPDPKKLKMSSTTTTSDDEGVNSNSEAPKKQRYKRRKIAIFFAYCGVGYQGMQKNPGAKTIEADLEEALYLAGAVPEQDRG

Query:  LSKRYDWARSARTDKGVSAVGQVVSGRFYIDPPGFVDRLNLNLSPQILIFGYKRVTASFNAKKFCDRRRYVYLIPVFALDPNCHRDRESVKASLGSDNEL
        LSKRYDWARSARTDKGVSAVGQVVSGRFYIDPPGFVDRLN NLSPQI IFGYKRVTASFNAKKFCDRRRYVYLIPVFALDPNCHRDRESVKASLGSDNEL
Subjt:  LSKRYDWARSARTDKGVSAVGQVVSGRFYIDPPGFVDRLNLNLSPQILIFGYKRVTASFNAKKFCDRRRYVYLIPVFALDPNCHRDRESVKASLGSDNEL

Query:  VKCLECSERGRKVEGLMGKRNFEVKTVITESDISSNTGTAIEVSDIQENRVLEDNATTSDSNKQTSVLVENSCTELNVGSEGTAKSEGSYMSGLGNDSEI
        VKCLECSERGRKVEGLMGKRNFEVKT ITESDISSN   AIEVSD+Q N VLED+ATTSDSNKQTSVLVEN+ TEL V SEG AKSE S MSGLGNDSEI
Subjt:  VKCLECSERGRKVEGLMGKRNFEVKTVITESDISSNTGTAIEVSDIQENRVLEDNATTSDSNKQTSVLVENSCTELNVGSEGTAKSEGSYMSGLGNDSEI

Query:  VVSKESVNRNEKPSGSFKYGEEEKARFNRILKNYVGTHNFHNFTTRTKAEDPAAHRFIVSFDASNTVVVEGIEFVKCEVVGQSFMLHQIRKMMGLAVAIM
        VVSKESVN  EKPSGSFKYGEEEKARFNRILK+YVGTHNFHNFTTRTKAEDPAA RFIVSFDAS TVVVEGIEFVKCEVVGQSFMLHQIRKMMGLAVAIM
Subjt:  VVSKESVNRNEKPSGSFKYGEEEKARFNRILKNYVGTHNFHNFTTRTKAEDPAAHRFIVSFDASNTVVVEGIEFVKCEVVGQSFMLHQIRKMMGLAVAIM

Query:  RNCAPESLIEKALQKDVNINVPTAPEVGLYLDECLFTSYNQKWKDSHEEVSMKAYEEVAEDFKMKQIYSHIASTEHKDGAVALWLHSLNHRNYPDLRVVD
        RNCAPESLIEKALQKDVNINVPTAPEVGLYLDECLFTSYNQKWKD+HEEVSMKAYEEVAEDFKMKQIYSHIASTEHKDGAVALWLHSLNHRNYPDLRV+D
Subjt:  RNCAPESLIEKALQKDVNINVPTAPEVGLYLDECLFTSYNQKWKDSHEEVSMKAYEEVAEDFKMKQIYSHIASTEHKDGAVALWLHSLNHRNYPDLRVVD

Query:  EVAEIAKNTSVAMETQAET
        EVA+IAKNTSV METQAET
Subjt:  EVAEIAKNTSVAMETQAET

A0A6J1IJ76 tRNA pseudouridine synthase A

1.9e-268

91.71

Show/hide

Query:  MEKEPPTETRRSPPQPLIEEPDPKKLKMSSTTTTSDDEGVNSNSEAPKKQRYKRRKIAIFFAYCGVGYQGMQKNPGAKTIEADLEEALYLAGAVPEQDRG
        ME+EPPT+TRRSPPQP IEEP+PKKLKMSSTTTTSDDE VNSNS APKKQRYKRRKIAIFFAYCGVGYQGMQKNPGAKTIEADLEEALYLAGAVPEQDRG
Subjt:  MEKEPPTETRRSPPQPLIEEPDPKKLKMSSTTTTSDDEGVNSNSEAPKKQRYKRRKIAIFFAYCGVGYQGMQKNPGAKTIEADLEEALYLAGAVPEQDRG

Query:  LSKRYDWARSARTDKGVSAVGQVVSGRFYIDPPGFVDRLNLNLSPQILIFGYKRVTASFNAKKFCDRRRYVYLIPVFALDPNCHRDRESVKASLGSDNEL
        LSKRYDWARSARTDKGVSAVGQVVSGRFYIDPPGFVDRLN NLSPQI IFGYKRVTASFNAKKFCDRRRYVYLIPVFALDPNCHRDRESVKASLGS NEL
Subjt:  LSKRYDWARSARTDKGVSAVGQVVSGRFYIDPPGFVDRLNLNLSPQILIFGYKRVTASFNAKKFCDRRRYVYLIPVFALDPNCHRDRESVKASLGSDNEL

Query:  VKCLECSERGRKVEGLMGKRNFEVKTVITESDISSNTGTAIEVSDIQENRVLEDNATTSDSNKQTSVLVENSCTELNVGSEGTAKSEGSYMSGLGNDSEI
        VKCLECSERGRKVEGLMGKRNFEVKT I+ESDIS N G AIEVSD+Q N  LEDNAT SDS K+TSVLVENS TELNVGSE  AKSEGS MSGLGNDSE 
Subjt:  VKCLECSERGRKVEGLMGKRNFEVKTVITESDISSNTGTAIEVSDIQENRVLEDNATTSDSNKQTSVLVENSCTELNVGSEGTAKSEGSYMSGLGNDSEI

Query:  VVSKESVNRNEKPSGSFKYGEEEKARFNRILKNYVGTHNFHNFTTRTKAEDPAAHRFIVSFDASNTVVVEGIEFVKCEVVGQSFMLHQIRKMMGLAVAIM
        VVSK+SVNRNEKPSGSFKYGEEEKARFNRILK YVGTHNFHNFTTRTKAEDPAA RFI+SFDA+ TVVVEG+EFVKCEVVGQSFMLHQIRKMMGLAVAIM
Subjt:  VVSKESVNRNEKPSGSFKYGEEEKARFNRILKNYVGTHNFHNFTTRTKAEDPAAHRFIVSFDASNTVVVEGIEFVKCEVVGQSFMLHQIRKMMGLAVAIM

Query:  RNCAPESLIEKALQKDVNINVPTAPEVGLYLDECLFTSYNQKWKDSHEEVSMKAYEEVAEDFKMKQIYSHIASTEHKDGAVALWLHSLNHRNYPDLRVVD
        RNCAPESLIEKALQ+DVNINVPTAPEVGLYLDECLFTSYNQKWKDSHEEVSMKAYEEVAEDFKMK IYSHI STEHK+GAVALWLHSLNHRNYPDLRV D
Subjt:  RNCAPESLIEKALQKDVNINVPTAPEVGLYLDECLFTSYNQKWKDSHEEVSMKAYEEVAEDFKMKQIYSHIASTEHKDGAVALWLHSLNHRNYPDLRVVD

Query:  EVAEIAKNTSVAMETQAET
        E A+ AKNTSV +ETQAET
Subjt:  EVAEIAKNTSVAMETQAET

E5GCD2 tRNA pseudouridine synthase family protein

1.6e-275

94.22

Show/hide

Query:  MEKEPPTETRRSPPQPLIEEPDPKKLKMSSTTTTSDDEGVNSNSEAPKKQRYKRRKIAIFFAYCGVGYQGMQKNPGAKTIEADLEEALYLAGAVPEQDRG
        ME+EPPTETRRSPPQPLIEEPDPKKLKMSSTTTTSDDE VNSNS APKKQRYKRRK+AIFFAYCGVGYQGMQKNPGAKTIEADLEEALYLAGAVPEQDRG
Subjt:  MEKEPPTETRRSPPQPLIEEPDPKKLKMSSTTTTSDDEGVNSNSEAPKKQRYKRRKIAIFFAYCGVGYQGMQKNPGAKTIEADLEEALYLAGAVPEQDRG

Query:  LSKRYDWARSARTDKGVSAVGQVVSGRFYIDPPGFVDRLNLNLSPQILIFGYKRVTASFNAKKFCDRRRYVYLIPVFALDPNCHRDRESVKASLGSDNEL
        LSKRYDWARSARTDKGVSAVGQVVSGRFYIDPPGFVDRLN NLSPQI IFGYKRVTASFNAKKFCDRRRYVYLIPVFALDPNCHRDRESVKASLGSDNEL
Subjt:  LSKRYDWARSARTDKGVSAVGQVVSGRFYIDPPGFVDRLNLNLSPQILIFGYKRVTASFNAKKFCDRRRYVYLIPVFALDPNCHRDRESVKASLGSDNEL

Query:  VKCLECSERGRKVEGLMGKRNFEVKTVITESDISSNTGTAIEVSDIQENRVLEDNATTSDSNKQTSVLVENSCTELNVGSEGTAKSEGSYMSGLGNDSEI
        VKCLECSERGRKVEGLMGKRNFEVKT ITESDISSN   AIEVSD+Q N VLED+ATTSDSNKQTSVLVEN+ TEL V SEG AKSE S MSGLGNDSEI
Subjt:  VKCLECSERGRKVEGLMGKRNFEVKTVITESDISSNTGTAIEVSDIQENRVLEDNATTSDSNKQTSVLVENSCTELNVGSEGTAKSEGSYMSGLGNDSEI

Query:  VVSKESVNRNEKPSGSFKYGEEEKARFNRILKNYVGTHNFHNFTTRTKAEDPAAHRFIVSFDASNTVVVEGIEFVKCEVVGQSFMLHQIRKMMGLAVAIM
        VVSKESVN  EKPSGSFKYGEEEKARFNRILK+YVGTHNFHNFTTRTKAEDPAA RFIVSFDAS TVVVEGIEFVKCEVVGQSFMLHQIRKMMGLAVAIM
Subjt:  VVSKESVNRNEKPSGSFKYGEEEKARFNRILKNYVGTHNFHNFTTRTKAEDPAAHRFIVSFDASNTVVVEGIEFVKCEVVGQSFMLHQIRKMMGLAVAIM

Query:  RNCAPESLIEKALQKDVNINVPTAPEVGLYLDECLFTSYNQKWKDSHEEVSMKAYEEVAEDFKMKQIYSHIASTEHKDGAVALWLHSLNHRNYPDLRVVD
        RNCAPESLIEKALQKDVNINVPTAPEVGLYLDECLFTSYNQKWKD+HEEVSMKAYEEVAEDFKMKQIYSHIASTEHKDGAVALWLHSLNHRNYPDLRV+D
Subjt:  RNCAPESLIEKALQKDVNINVPTAPEVGLYLDECLFTSYNQKWKDSHEEVSMKAYEEVAEDFKMKQIYSHIASTEHKDGAVALWLHSLNHRNYPDLRVVD

Query:  EVAEIAKNTSVAMETQAET
        EVA+IAKNTSV METQAET
Subjt:  EVAEIAKNTSVAMETQAET

SwissProt top hits

e value

%identity

Alignment

Q4KM92 tRNA pseudouridine synthase A

1.5e-47

29.7

Show/hide

Query:  PPTETRRSPPQPLIEEPDPK-KLKMSSTTTTSDDEGVNSNSEAPKKQRYKRRKIAIFFAYCGVGYQGMQKNPGA---KTIEADLEEALYLAGAVPEQDRG
        PP    + PP     +PD K +       T    + V    +    ++  +RKI +  AY G GY GMQ+N G+   +TIE DL  AL  AG +PE    
Subjt:  PPTETRRSPPQPLIEEPDPK-KLKMSSTTTTSDDEGVNSNSEAPKKQRYKRRKIAIFFAYCGVGYQGMQKNPGA---KTIEADLEEALYLAGAVPEQDRG

Query:  LSKRYDWARSARTDKGVSAVGQVVSGRFYIDPPGFVDRLNLNLSPQILIFGYKRVTASFNAKKFCDRRRYVYLIPVFALDPNCHRDRESVKASLGSDNEL
          ++  + R ARTDKGVSA GQVVS + ++     +D++N +L   I I G KRVT  FN+K  CD R Y Y++P FA     H+DR             
Subjt:  LSKRYDWARSARTDKGVSAVGQVVSGRFYIDPPGFVDRLNLNLSPQILIFGYKRVTASFNAKKFCDRRRYVYLIPVFALDPNCHRDRESVKASLGSDNEL

Query:  VKCLECSERGRKVEGLMGKRNFEVKTVITESDISSNTGTAIEVSDIQENRVLEDNATTSDSNKQTSVLVENSCTELNVGSEGTAKSEGSYMSGLGNDSEI
                                                    D+Q+                                                    
Subjt:  VKCLECSERGRKVEGLMGKRNFEVKTVITESDISSNTGTAIEVSDIQENRVLEDNATTSDSNKQTSVLVENSCTELNVGSEGTAKSEGSYMSGLGNDSEI

Query:  VVSKESVNRNEKPSGSFKYGEEEKARFNRILKNYVGTHNFHNFTTRTKAEDPAAHRFIVSFDASNTVVVEGIEFVKCEVVGQSFMLHQIRKMMGLAVAIM
                       S++   E   + NR+L  Y GTHNFHNFT++    +P+A R+I+        V EG+EF   +V GQSFM+HQIRKM+GL VAI+
Subjt:  VVSKESVNRNEKPSGSFKYGEEEKARFNRILKNYVGTHNFHNFTTRTKAEDPAAHRFIVSFDASNTVVVEGIEFVKCEVVGQSFMLHQIRKMMGLAVAIM

Query:  RNCAPESLIEKALQKDVNINVPTAPEVGLYLDECLFTSYNQKWKDS--HEEVSMKAYEEVAEDFKMKQIYSHIASTEHKDGAVALWLHSLNHRNY
        +  APES++E++  ++  ++VP AP +GL L+   F  YNQ++     HE +     E     FK + IY  I STE  + ++A WL++L   N+
Subjt:  RNCAPESLIEKALQKDVNINVPTAPEVGLYLDECLFTSYNQKWKDS--HEEVSMKAYEEVAEDFKMKQIYSHIASTEHKDGAVALWLHSLNHRNY

Q59S63 tRNA pseudouridine synthase 1

1.8e-53

32.16

Show/hide

Query:  EPPTETRRSPPQPLIEEPDPKKLKMS-------STTTTSDDEGVNSNSEAPKKQRYKRRKIAIFFAYCGVGYQGM--QKNPGAKTIEADLEEALYLAGAV
        E  T  R+S P P   E D K+LK           T   D+ G       PK  R  +RK+A+   YCG GY GM  Q +P  KTIE D+ +A+  AGA+
Subjt:  EPPTETRRSPPQPLIEEPDPKKLKMS-------STTTTSDDEGVNSNSEAPKKQRYKRRKIAIFFAYCGVGYQGM--QKNPGAKTIEADLEEALYLAGAV

Query:  PEQDRGLSKRYDWARSARTDKGVSAVGQVVSGRFYIDPPGFVDRLNLNLSPQILIFGYKRVTASFNAKKFCDRRRYVYLIPVFALDPNCHRDRESVKASL
          ++    K+  + R+ARTDKGV A G V+S +  I+ P  ++++N  L  QI I+G +R T  F+ +K C  R Y YL+P F+L P         K+ L
Subjt:  PEQDRGLSKRYDWARSARTDKGVSAVGQVVSGRFYIDPPGFVDRLNLNLSPQILIFGYKRVTASFNAKKFCDRRRYVYLIPVFALDPNCHRDRESVKASL

Query:  GSDNELVKCLECSERGRKVEGLMGKRNFEVKTVITESDISSNTGTAIEVSDIQENRVLEDNATTSDSNKQTSVLVENSCTELNVGSEGTAKSEGSYMSGL
           +ELVK        +K+E                 D+  +    I+  +  ++++L    T    +  TS   E    +     +  A  E   +S L
Subjt:  GSDNELVKCLECSERGRKVEGLMGKRNFEVKTVITESDISSNTGTAIEVSDIQENRVLEDNATTSDSNKQTSVLVENSCTELNVGSEGTAKSEGSYMSGL

Query:  GNDSEIVVSKESVNRNEKPSGSFKYGEEEKARFNRILKNYVGTHNFHNFTTRTKAEDPAAHRFIVSFDASNTVVVEGIEFVKCEVVGQSFMLHQIRKMMG
             I   K   N++ +   S++        F  ++K Y GTHNFHNFT     +D +A+RF++    S+  V+EG E++  ++ GQSFMLHQIRKM+ 
Subjt:  GNDSEIVVSKESVNRNEKPSGSFKYGEEEKARFNRILKNYVGTHNFHNFTTRTKAEDPAAHRFIVSFDASNTVVVEGIEFVKCEVVGQSFMLHQIRKMMG

Query:  LAVAIMRNCAPESLIEKALQKDVNINVPTAPEVGLYLDECLFTSYNQK-WKDSHEEVSMKAYEEVAEDFKMKQIYSHIASTEHKD
        +A  ++R   P  +I    Q    IN+P AP +GL L+  +F  YN K  K  +E +    +++   +FKMK IY  I + E K+
Subjt:  LAVAIMRNCAPESLIEKALQKDVNINVPTAPEVGLYLDECLFTSYNQK-WKDSHEEVSMKAYEEVAEDFKMKQIYSHIASTEHKD

Q6CC39 tRNA pseudouridine synthase 1

4.6e-49

30.86

Show/hide

Query:  RYKRRKIAIFFAYCGVGYQGMQKNPGAKTIEADLEEALYLAGAVPEQDRGLSKRYDWARSARTDKGVSAVGQVVSGRFYIDPPGFVDRLNLNLSPQILIF
        R  +RK+A    YCG GY GMQ NP  KTIE D+ +A   AGA+ + +    K+  + R+ARTDKGV A G V+S +  I+    V+++N +L  Q+ ++
Subjt:  RYKRRKIAIFFAYCGVGYQGMQKNPGAKTIEADLEEALYLAGAVPEQDRGLSKRYDWARSARTDKGVSAVGQVVSGRFYIDPPGFVDRLNLNLSPQILIF

Query:  GYKRVTASFNAKKFCDRRRYVYLIPVFAL---DPNCHRDRESVKASLGSDNELVKCLECSERGRKVEGLMGKRNFEVKTVITESDISSNTGTAIEVSDIQ
        G  R   +F  +K C  R Y YL+P ++     P      + +K     D E                  GK+ +E                    +D++
Subjt:  GYKRVTASFNAKKFCDRRRYVYLIPVFAL---DPNCHRDRESVKASLGSDNELVKCLECSERGRKVEGLMGKRNFEVKTVITESDISSNTGTAIEVSDIQ

Query:  ENRVLEDNATTSDSNKQTSVLVENSCTELNVGSEGTAKSEGSYMSGLGNDSEIVVSKESVNRNEKPSGSFKYGEEEKARFNRILKNYVGTHNFHNFTTRT
           V  D              ++ +C +   G E    +E    +    D+  +   ++V R  +    F+   E  A+   ILK Y GTHNFHNFT   
Subjt:  ENRVLEDNATTSDSNKQTSVLVENSCTELNVGSEGTAKSEGSYMSGLGNDSEIVVSKESVNRNEKPSGSFKYGEEEKARFNRILKNYVGTHNFHNFTTRT

Query:  KAEDPAAHRFIVSFDASNTVVVEGIEFVKCEVVGQSFMLHQIRKMMGL-AVAIMRNCAPESLIEKALQKDVNINVPTAPEVGLYLDECLFTSYNQKWKD-
          +DP+A R + S   S+  +++G E+V  ++ GQSFMLHQIRKM+ + A+++  N  P+ LI +  +K   IN+P AP +GL L+  ++ SYN+K +  
Subjt:  KAEDPAAHRFIVSFDASNTVVVEGIEFVKCEVVGQSFMLHQIRKMMGL-AVAIMRNCAPESLIEKALQKDVNINVPTAPEVGLYLDECLFTSYNQKWKD-

Query:  -SHEEVSMKAYEEVAEDFKMKQIYSHIASTE
           E V    + +  E FK K IY  I + E
Subjt:  -SHEEVSMKAYEEVAEDFKMKQIYSHIASTE

Q9WU56 tRNA pseudouridine synthase A

8.6e-48

29.7

Show/hide

Query:  PPTETRRSPPQPLIEEPDPK-KLKMSSTTTTSDDEGVNSNSEAPKKQRYKRRKIAIFFAYCGVGYQGMQKNPGA---KTIEADLEEALYLAGAVPEQDRG
        PP    + PP     +PD K +       T    + V    +    ++  +RKI +  AY G GY GMQ+N G+   +TIE DL  AL  AG +PE    
Subjt:  PPTETRRSPPQPLIEEPDPK-KLKMSSTTTTSDDEGVNSNSEAPKKQRYKRRKIAIFFAYCGVGYQGMQKNPGA---KTIEADLEEALYLAGAVPEQDRG

Query:  LSKRYDWARSARTDKGVSAVGQVVSGRFYIDPPGFVDRLNLNLSPQILIFGYKRVTASFNAKKFCDRRRYVYLIPVFALDPNCHRDRESVKASLGSDNEL
          ++  + R ARTDKGVSA GQVVS + ++     +D++N +L   I I G KRVT  FN+K  CD R Y Y++P FA     H+DR             
Subjt:  LSKRYDWARSARTDKGVSAVGQVVSGRFYIDPPGFVDRLNLNLSPQILIFGYKRVTASFNAKKFCDRRRYVYLIPVFALDPNCHRDRESVKASLGSDNEL

Query:  VKCLECSERGRKVEGLMGKRNFEVKTVITESDISSNTGTAIEVSDIQENRVLEDNATTSDSNKQTSVLVENSCTELNVGSEGTAKSEGSYMSGLGNDSEI
                                                    D+Q+                                                    
Subjt:  VKCLECSERGRKVEGLMGKRNFEVKTVITESDISSNTGTAIEVSDIQENRVLEDNATTSDSNKQTSVLVENSCTELNVGSEGTAKSEGSYMSGLGNDSEI

Query:  VVSKESVNRNEKPSGSFKYGEEEKARFNRILKNYVGTHNFHNFTTRTKAEDPAAHRFIVSFDASNTVVVEGIEFVKCEVVGQSFMLHQIRKMMGLAVAIM
                       S++   E   + NR+L  Y GTHNFHNFT++    +P+A R+I+        V EG+EF   +V GQSFM+HQIRKM+GL VAI+
Subjt:  VVSKESVNRNEKPSGSFKYGEEEKARFNRILKNYVGTHNFHNFTTRTKAEDPAAHRFIVSFDASNTVVVEGIEFVKCEVVGQSFMLHQIRKMMGLAVAIM

Query:  RNCAPESLIEKALQKDVNINVPTAPEVGLYLDECLFTSYNQKWKDS--HEEVSMKAYEEVAEDFKMKQIYSHIASTEHKDGAVALWLHSLNHRNY
        +  APES++E++  ++  ++VP AP +GL L+   F  YNQ++     HE +     E     FK + IY  I STE  + ++A WL++L   N+
Subjt:  RNCAPESLIEKALQKDVNINVPTAPEVGLYLDECLFTSYNQKWKDS--HEEVSMKAYEEVAEDFKMKQIYSHIASTEHKDGAVALWLHSLNHRNY

Q9Y606 tRNA pseudouridine synthase A

1.7e-48

30.07

Show/hide

Query:  VNSNSEAPKKQRYKRRKIAIFFAYCGVGYQGMQKNPGA---KTIEADLEEALYLAGAVPEQDRGLSKRYDWARSARTDKGVSAVGQVVSGRFYIDPPGFV
        + S  +  ++++  +RKI +  AY G GY GMQ+N G+   KTIE DL  AL  +G +PE      ++  + R ARTDKGVSA GQVVS + ++     +
Subjt:  VNSNSEAPKKQRYKRRKIAIFFAYCGVGYQGMQKNPGA---KTIEADLEEALYLAGAVPEQDRGLSKRYDWARSARTDKGVSAVGQVVSGRFYIDPPGFV

Query:  DRLNLNLSPQILIFGYKRVTASFNAKKFCDRRRYVYLIPVFALDPNCHRDRESVKASLGSDNELVKCLECSERGRKVEGLMGKRNFEVKTVITESDISSN
        +++N +L   I I G KRVT  FN+K  CD R Y YL+P FA     H+DR                                                 
Subjt:  DRLNLNLSPQILIFGYKRVTASFNAKKFCDRRRYVYLIPVFALDPNCHRDRESVKASLGSDNELVKCLECSERGRKVEGLMGKRNFEVKTVITESDISSN

Query:  TGTAIEVSDIQENRVLEDNATTSDSNKQTSVLVENSCTELNVGSEGTAKSEGSYMSGLGNDSEIVVSKESVNRNEKPSGSFKYGEEEKARFNRILKNYVG
                D+Q+                                                                   +++   E   + NR+L  Y G
Subjt:  TGTAIEVSDIQENRVLEDNATTSDSNKQTSVLVENSCTELNVGSEGTAKSEGSYMSGLGNDSEIVVSKESVNRNEKPSGSFKYGEEEKARFNRILKNYVG

Query:  THNFHNFTTRTKAEDPAAHRFIVSFDASNTVVVEGIEFVKCEVVGQSFMLHQIRKMMGLAVAIMRNCAPESLIEKALQKDVNINVPTAPEVGLYLDECLF
        THNFHNFT++   +DP+A R+I+        V EG+EF    V GQSFM+HQIRKM+GL VAI++  APES++E++   +  ++VP AP +GL L+   F
Subjt:  THNFHNFTTRTKAEDPAAHRFIVSFDASNTVVVEGIEFVKCEVVGQSFMLHQIRKMMGLAVAIMRNCAPESLIEKALQKDVNINVPTAPEVGLYLDECLF

Query:  TSYNQKWKDS--HEEVSMKAYEEVAEDFKMKQIYSHIASTEHKDGAVALWLHSLNHRNY
          YNQ++ +   HE +     E     FK + IY  I  TE  + ++A WL +L   N+
Subjt:  TSYNQKWKDS--HEEVSMKAYEEVAEDFKMKQIYSHIASTEHKDGAVALWLHSLNHRNY

Arabidopsis top hits

e value

%identity

Alignment

AT1G20290.1 SWI-SNF-related chromatin binding protein

3.0e-11

64.15

Show/hide

Query:  SHEEVSMKAYEEVAED-FKMKQIYSHIASTEHKDGAVALWLHSLNHRNYPDLR
        S  EVS+   +E   D FK K +YSHI S E KDGAVA+WLHSLN RNYPDLR
Subjt:  SHEEVSMKAYEEVAED-FKMKQIYSHIASTEHKDGAVALWLHSLNHRNYPDLR

AT1G20370.1 Pseudouridine synthase family protein

3.5e-153

58.07

Show/hide

Query:  MEKEPPTETRRSPPQPLIEEPDPKKLKMSSTTTTSDDEGV---NSNSEAPKKQRYKRRKIAIFFAYCGVGYQGMQKNPGAKTIEADLEEALYLAGAVPEQ
        ME + P   +         EPD KKLK+S+T   +D   V    SN    +  +Y+RRK+AI FA+CGVGYQGMQKNPGAKTIE +LEEAL+ AGAVP+ 
Subjt:  MEKEPPTETRRSPPQPLIEEPDPKKLKMSSTTTTSDDEGV---NSNSEAPKKQRYKRRKIAIFFAYCGVGYQGMQKNPGAKTIEADLEEALYLAGAVPEQ

Query:  DRGLSKRYDWARSARTDKGVSAVGQVVSGRFYIDPPGFVDRLNLNLSPQILIFGYKRVTASFNAKKFCDRRRYVYLIPVFALDPNCHRDRESVKASLGSD
        DR   + Y+WARSARTDKGVSAVGQVVSGRFY+DPPGFV+RLN  L  QI +FGYKRV  SF++KKFCDRRRYVYLIPVFALDP  H + E V+  LG  
Subjt:  DRGLSKRYDWARSARTDKGVSAVGQVVSGRFYIDPPGFVDRLNLNLSPQILIFGYKRVTASFNAKKFCDRRRYVYLIPVFALDPNCHRDRESVKASLGSD

Query:  NELVKCLECSERGRKVE-GLMGKRN--FEVKTVITESDISSNTGTAIEVSDIQENRVLEDNATTSDSNKQTSVLVENSCTELNVGSEGTAKSEGSYMSGL
         E VKC+ECSE+G K+  G+MGK     + K++  +SDISS+T  AI  +D+ +   L  +  ++++N  + VL     + L+  +EG  +S        
Subjt:  NELVKCLECSERGRKVE-GLMGKRN--FEVKTVITESDISSNTGTAIEVSDIQENRVLEDNATTSDSNKQTSVLVENSCTELNVGSEGTAKSEGSYMSGL

Query:  GNDSEIVVSKESVNRNE-----KPSGSFKYGEEEKARFNRILKNYVGTHNFHNFTTRTKAEDPAAHRFIVSFDASNTVVVEGIEFVKCEVVGQSFMLHQI
               ++K  +N  E     K    F YGE+EK RFNRIL  YVG+HNFHNFTTRTKA DPAA+R+I+SF+A+  + ++G +FVKCEVVGQSFMLHQI
Subjt:  GNDSEIVVSKESVNRNE-----KPSGSFKYGEEEKARFNRILKNYVGTHNFHNFTTRTKAEDPAAHRFIVSFDASNTVVVEGIEFVKCEVVGQSFMLHQI

Query:  RKMMGLAVAIMRNCAPESLIEKALQKDVNINVPTAPEVGLYLDECLFTSYNQKWKDSHEEVSMKAYEEVAEDFKMKQIYSHIASTEHKDGAVALWLHSLN
        RKM+GLAVAIMRN APESLIE + +KDV INVP APEVGLYLDEC FTSYN+++K SHEEVSM+ Y+EVAE+FK K +YSHI S E KDGAVA+WLHSLN
Subjt:  RKMMGLAVAIMRNCAPESLIEKALQKDVNINVPTAPEVGLYLDECLFTSYNQKWKDSHEEVSMKAYEEVAEDFKMKQIYSHIASTEHKDGAVALWLHSLN

Query:  HRNYPDLR
         RNYPDLR
Subjt:  HRNYPDLR

AT1G76120.1 Pseudouridine synthase family protein

6.8e-149

60.21

Show/hide

Query:  TTTTSDDEGVNSNSEAPKKQRYKRRKIAIFFAYCGVGYQGMQKNPGAKTIEADLEEALYLAGAVPEQDRGLSKRYDWARSARTDKGVSAVGQVVSGRFYI
        TTTT ++  ++ +    + Q     K+AI FA+CGVGYQGMQKNPGAKTIE +LEEAL+ AGAVPE  RG  K YD+ARSARTDKGVSAVGQVVSGRF +
Subjt:  TTTTSDDEGVNSNSEAPKKQRYKRRKIAIFFAYCGVGYQGMQKNPGAKTIEADLEEALYLAGAVPEQDRGLSKRYDWARSARTDKGVSAVGQVVSGRFYI

Query:  DPPGFVDRLNLNLSPQILIFGYKRVTASFNAKKFCDRRRYVYLIPVFALDPNCHRDRESVKASLGSDNELVKCLECSERGRKV-EGLMGK---RNFEVKT
        DP GFV+RLN NL  QI IFGYK VT SF++KKFCDRRRYVYL+PVFALDP  HRDRE+V ASLG   E VKC ECSERGRK+  GL+GK    NF  K+
Subjt:  DPPGFVDRLNLNLSPQILIFGYKRVTASFNAKKFCDRRRYVYLIPVFALDPNCHRDRESVKASLGSDNELVKCLECSERGRKV-EGLMGK---RNFEVKT

Query:  VITESDISSNTGTAIEVSDIQENRVLEDNATTSDSNKQTSVLVENSCTELNVGSEGTAKSEGSYMSGLGNDSEIVVSKESVNRNEKPSGSFKYGEEEKAR
        +  +SDISSN  +A+  SDI+   +  + A     + +   + E+SC +LN  S  T                            K    F YGE+EK R
Subjt:  VITESDISSNTGTAIEVSDIQENRVLEDNATTSDSNKQTSVLVENSCTELNVGSEGTAKSEGSYMSGLGNDSEIVVSKESVNRNEKPSGSFKYGEEEKAR

Query:  FNRILKNYVGTHNFHNFTTRTKAEDPAAHRFIVSFDASNTVVVEGIEFVKCEVVGQSFMLHQIRKMMGLAVAIMRNCAPESLIEKALQKDVNINVPTAPE
        F+RIL  YVG++NFHNFTTRTKA+DP A+R I+SF A+  + ++GI+F+KCEV+G+SFMLHQIRKMMGLAVAIMRNCA ESLI+ A  KDVNI VP APE
Subjt:  FNRILKNYVGTHNFHNFTTRTKAEDPAAHRFIVSFDASNTVVVEGIEFVKCEVVGQSFMLHQIRKMMGLAVAIMRNCAPESLIEKALQKDVNINVPTAPE

Query:  VGLYLDECLFTSYNQKWKDSHEEVSMKAYEEVAEDFKMKQIYSHIASTEHKDGAVALWLHSLNHRNYPDL
        VGLYLDEC FTSYN+ ++DSHEEVSM+AY+E AE FK+K IYSHI +TE K G +ALWLHSLN+RNYPDL
Subjt:  VGLYLDECLFTSYNQKWKDSHEEVSMKAYEEVAEDFKMKQIYSHIASTEHKDGAVALWLHSLNHRNYPDL

AT1G76120.2 Pseudouridine synthase family protein

1.3e-110

57.07

Show/hide

Query:  TTTTSDDEGVNSNSEAPKKQRYKRRKIAIFFAYCGVGYQGMQKNPGAKTIEADLEEALYLAGAVPEQDRGLSKRYDWARSARTDKGVSAVGQVVSGRFYI
        TTTT ++  ++ +    + Q     K+AI FA+CGVGYQGMQKNPGAKTIE +LEEAL+ AGAVPE  RG  K YD+ARSARTDKGVSAVGQVVSGRF +
Subjt:  TTTTSDDEGVNSNSEAPKKQRYKRRKIAIFFAYCGVGYQGMQKNPGAKTIEADLEEALYLAGAVPEQDRGLSKRYDWARSARTDKGVSAVGQVVSGRFYI

Query:  DPPGFVDRLNLNLSPQILIFGYKRVTASFNAKKFCDRRRYVYLIPVFALDPNCHRDRESVKASLGSDNELVKCLECSERGRKV-EGLMGK---RNFEVKT
        DP GFV+RLN NL  QI IFGYK VT SF++KKFCDRRRYVYL+PVFALDP  HRDRE+V ASLG   E VKC ECSERGRK+  GL+GK    NF  K+
Subjt:  DPPGFVDRLNLNLSPQILIFGYKRVTASFNAKKFCDRRRYVYLIPVFALDPNCHRDRESVKASLGSDNELVKCLECSERGRKV-EGLMGK---RNFEVKT

Query:  VITESDISSNTGTAIEVSDIQENRVLEDNATTSDSNKQTSVLVENSCTELNVGSEGTAKSEGSYMSGLGNDSEIVVSKESVNRNEKPSGSFKYGEEEKAR
        +  +SDISSN  +A+  SDI+   +  + A     + +   + E+SC +LN  S  T                            K    F YGE+EK R
Subjt:  VITESDISSNTGTAIEVSDIQENRVLEDNATTSDSNKQTSVLVENSCTELNVGSEGTAKSEGSYMSGLGNDSEIVVSKESVNRNEKPSGSFKYGEEEKAR

Query:  FNRILKNYVGTHNFHNFTTRTKAEDPAAHRFIVSFDASNTVVVEGIEFVKCEVVGQSFMLHQIRKMMGLAVAIMRNCAPESLIEKALQK
        F+RIL  YVG++NFHNFTTRTKA+DP A+R I+SF A+  + ++GI+F+KCEV+G+SFMLHQIRKMMGLAVAIMRNCA ESLI+ A  K
Subjt:  FNRILKNYVGTHNFHNFTTRTKAEDPAAHRFIVSFDASNTVVVEGIEFVKCEVVGQSFMLHQIRKMMGLAVAIMRNCAPESLIEKALQK

AT2G30320.1 Pseudouridine synthase family protein

2.3e-24

Show/hide

Query:  PKKLKMSST-----TTTSDDEGVNSNSEAPKKQRYKRRKIAIFFAYCGVGYQGMQ---KNPGAKTIEADLEEALYLAGAVPEQDRGLSKRYDWARSARTD
        P  L+ SS+     ++TS     + N  A K + Y+++K+ I   Y G  Y+G+Q    +P  KTIE +LE A+Y AG + + + G   +  WARS+RTD
Subjt:  PKKLKMSST-----TTTSDDEGVNSNSEAPKKQRYKRRKIAIFFAYCGVGYQGMQ---KNPGAKTIEADLEEALYLAGAVPEQDRGLSKRYDWARSARTD

Query:  KGVSAVGQVVSGRFYI-------DPPGFV--DRLNLNLSPQILIFGYKRVTASFNAKKFCDRRRYVYLIPVFALDPNCHRDRESVKASLGSDNELVKCLE
        KGV ++   +S +  I       DP G V    ++ +L   I +F        F+ ++ C  R+Y YL+PV  L          +K S  SD       +
Subjt:  KGVSAVGQVVSGRFYI-------DPPGFV--DRLNLNLSPQILIFGYKRVTASFNAKKFCDRRRYVYLIPVFALDPNCHRDRESVKASLGSDNELVKCLE

Query:  CSERGRKVEGLMGKRNFEVKTVITESDISSNTGTAIEVSDIQENRVLEDNATTSDSNKQTSVLVENSCTELNVGSEGTAKSEGSYMSGLGNDSEIVVSKE
         +E  ++ EG     N+  ++                   I++          S    ++    EN    + +G E   K         G   E VV+ +
Subjt:  CSERGRKVEGLMGKRNFEVKTVITESDISSNTGTAIEVSDIQENRVLEDNATTSDSNKQTSVLVENSCTELNVGSEGTAKSEGSYMSGLGNDSEIVVSKE

Query:  SVNRNEKPSGSFKYGEEEKARFNRILKNYVGTHNFHNFTTRTKAEDPAAHRFIVSFDASNTVVVEGIEFVKCEVVGQSFMLHQIRKMMGLAVAIMRNCAP
        S N        + Y  +E  + +       G H    F  R             S    N++   G  FV+  + G+SFMLHQIRKM+G AVA+ R   P
Subjt:  SVNRNEKPSGSFKYGEEEKARFNRILKNYVGTHNFHNFTTRTKAEDPAAHRFIVSFDASNTVVVEGIEFVKCEVVGQSFMLHQIRKMMGLAVAIMRNCAP

Query:  ESLIEKALQKDVNINVPTAPEVGLYL
          +I  +L K   I +P AP   L L
Subjt:  ESLIEKALQKDVNINVPTAPEVGLYL

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGAGAAAGAACCGCCAACTGAAACCAGAAGGTCACCGCCACAACCGTTGATCGAAGAACCAGACCCGAAGAAGCTCAAAATGTCATCCACAACCACCACCTCCGACGA
CGAAGGTGTCAATTCCAATTCTGAGGCGCCGAAGAAACAAAGGTACAAGCGCCGCAAGATCGCCATTTTCTTTGCCTACTGTGGCGTCGGTTACCAAGGGATGCAGAAGA
ATCCGGGCGCTAAAACCATTGAAGCTGACCTTGAAGAGGCCCTATATCTCGCCGGGGCAGTCCCGGAGCAGGACCGAGGGCTCTCGAAGCGCTACGATTGGGCCCGCTCG
GCTCGCACTGATAAGGGCGTGAGCGCCGTGGGTCAGGTTGTTTCTGGTCGCTTCTACATCGATCCGCCAGGTTTTGTTGATCGTCTCAATTTGAATCTTTCGCCTCAGAT
TCTAATTTTCGGGTACAAGCGCGTCACGGCGTCATTTAATGCGAAAAAGTTCTGCGATCGGAGAAGGTATGTATACCTAATTCCTGTCTTCGCTCTCGATCCTAATTGCC
ATCGTGATAGAGAAAGTGTGAAGGCTAGTTTAGGGTCTGACAACGAGCTTGTGAAGTGCTTAGAGTGCTCTGAACGAGGACGCAAGGTCGAAGGCTTGATGGGCAAGCGC
AATTTTGAAGTAAAAACTGTGATAACTGAGTCAGACATTTCTTCGAACACTGGAACCGCCATTGAAGTTTCTGATATTCAGGAAAATAGGGTTTTGGAGGACAATGCCAC
GACCTCTGATTCTAACAAACAAACTAGCGTTTTAGTCGAAAATAGTTGTACTGAACTCAATGTTGGAAGCGAAGGTACTGCAAAAAGTGAAGGCAGTTACATGTCTGGAT
TAGGGAATGATTCAGAGATTGTTGTAAGCAAAGAGAGCGTTAATAGGAATGAAAAACCCTCAGGGAGCTTCAAGTATGGCGAGGAGGAGAAGGCTAGGTTCAATAGGATT
TTGAAGAATTATGTAGGAACTCACAATTTCCATAATTTTACTACCAGAACAAAAGCAGAGGACCCTGCTGCTCATCGGTTCATTGTTTCATTTGATGCGTCTAATACCGT
CGTGGTTGAAGGCATCGAATTCGTGAAATGTGAAGTTGTGGGGCAGAGCTTCATGCTTCATCAAATCCGGAAGATGATGGGTCTTGCTGTGGCAATTATGAGGAACTGTG
CTCCAGAGTCCTTGATTGAGAAGGCTTTGCAAAAGGATGTAAATATCAATGTGCCCACTGCACCTGAGGTTGGACTGTACTTAGATGAGTGCCTATTCACATCATATAAT
CAAAAGTGGAAAGACAGTCATGAAGAAGTATCTATGAAAGCATACGAAGAGGTAGCAGAAGATTTCAAAATGAAGCAAATATATTCTCACATTGCTTCCACAGAGCACAA
AGATGGAGCCGTGGCCTTATGGTTGCATTCTCTAAACCATCGGAATTATCCAGATTTACGTGTTGTTGATGAGGTTGCAGAGATTGCTAAGAACACAAGTGTTGCCATGG
AGACACAAGCTGAAACTTAA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MEKEPPTETRRSPPQPLIEEPDPKKLKMSSTTTTSDDEGVNSNSEAPKKQRYKRRKIAIFFAYCGVGYQGMQKNPGAKTIEADLEEALYLAGAVPEQDRGLSKRYDWARS
ARTDKGVSAVGQVVSGRFYIDPPGFVDRLNLNLSPQILIFGYKRVTASFNAKKFCDRRRYVYLIPVFALDPNCHRDRESVKASLGSDNELVKCLECSERGRKVEGLMGKR
NFEVKTVITESDISSNTGTAIEVSDIQENRVLEDNATTSDSNKQTSVLVENSCTELNVGSEGTAKSEGSYMSGLGNDSEIVVSKESVNRNEKPSGSFKYGEEEKARFNRI
LKNYVGTHNFHNFTTRTKAEDPAAHRFIVSFDASNTVVVEGIEFVKCEVVGQSFMLHQIRKMMGLAVAIMRNCAPESLIEKALQKDVNINVPTAPEVGLYLDECLFTSYN
QKWKDSHEEVSMKAYEEVAEDFKMKQIYSHIASTEHKDGAVALWLHSLNHRNYPDLRVVDEVAEIAKNTSVAMETQAET

HG10013914 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome