CuGenDBv2

Gene ID	HG10013916
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	high mobility group B protein 9
Genome location	Chr02:6010689..6012285
RNA-Seq Expression	HG10013916
Synteny	HG10013916
Gene Ontology terms	GO:0010197 - polar nucleus fusion (biological process) GO:0005634 - nucleus (cellular component) GO:0003677 - DNA binding (molecular function)
InterPro domains	IPR001606 - ARID DNA-binding domain IPR009071 - High mobility group box domain IPR036431 - ARID DNA-binding domain superfamily IPR036910 - High mobility group box domain superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004145526.1 high mobility group B protein 9 [Cucumis sativus]

5.2e-156

86.5

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Query:  MSPPARTKSWNGGLDKHYPPSLATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSA
        MSPPARTK+WNGGLDKHYPPSLATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSA
Subjt:  MSPPARTKSWNGGLDKHYPPSLATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSA

Query:  SFVLRKHYLSLLYHYEQVYLFGRQGPICVPQAPFPFGSPTSENELALVEYTPKNTSFSPGPPAE-------------------------------DQPPP
        SFVLRKHYLSLLYHYEQVYLFGRQGPICVPQAPFPFGSPTSENELALVEYTPK TSFSPGPP+E                               DQPPP
Subjt:  SFVLRKHYLSLLYHYEQVYLFGRQGPICVPQAPFPFGSPTSENELALVEYTPKNTSFSPGPPAE-------------------------------DQPPP

Query:  SDLRPQSTNAIVPYTGVRHHRHSGRRHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKERYKR
        SDLRP STNAIVPYTG R +RHSGRRHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKERY+R
Subjt:  SDLRPQSTNAIVPYTGVRHHRHSGRRHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKERYKR

Query:  ELKEYKEKMRQATDVDGATNYSKHGE
        ELKEYKEKMR  T+VDGA NYSKHG+
Subjt:  ELKEYKEKMRQATDVDGATNYSKHGE

XP_008452910.1 PREDICTED: high mobility group B protein 9 [Cucumis melo]

2.0e-155

86.2

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Query:  MSPPARTKSWNGGLDKHYPPSLATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSA
        MSPPARTK+WNGGLDKHYPP LATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSA
Subjt:  MSPPARTKSWNGGLDKHYPPSLATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSA

Query:  SFVLRKHYLSLLYHYEQVYLFGRQGPICVPQAPFPFGSPTSENELALVEYTPKNTSFSPGPPAE-------------------------------DQPPP
        SFVLRKHYLSLLYHYEQVYLFGRQGPICVPQAPF FGSPTSENELALVEYTPK TSFSPGPP+E                               +QPPP
Subjt:  SFVLRKHYLSLLYHYEQVYLFGRQGPICVPQAPFPFGSPTSENELALVEYTPKNTSFSPGPPAE-------------------------------DQPPP

Query:  SDLRPQSTNAIVPYTGVRHHRHSGRRHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKERYKR
        SDLRP STNAIVPYTG R HRHSGRRHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKERY+R
Subjt:  SDLRPQSTNAIVPYTGVRHHRHSGRRHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKERYKR

Query:  ELKEYKEKMRQATDVDGATNYSKHGE
        ELKEYKEKMR  TDVDGA NYSKHG+
Subjt:  ELKEYKEKMRQATDVDGATNYSKHGE

XP_022140929.1 high mobility group B protein 9 [Momordica charantia]

2.3e-148

83.74

Show/hide

Query:  MSPPARTKSWNGGLDKHYPPSLATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSA
        MSPPAR+KSWN G DKHYP +LATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSA
Subjt:  MSPPARTKSWNGGLDKHYPPSLATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSA

Query:  SFVLRKHYLSLLYHYEQVYLFGRQGPICVPQAPFPFGSPTSENELALVEYTPKNTSFSPGPPAE-------------------------------DQPPP
        SFVLRKHYLSLLYHYEQVYLF RQGPICVPQAPF FGSP+SENELALVEYTPK TSFSPGPPAE                               +QP P
Subjt:  SFVLRKHYLSLLYHYEQVYLFGRQGPICVPQAPFPFGSPTSENELALVEYTPKNTSFSPGPPAE-------------------------------DQPPP

Query:  SDLRPQSTNAIVPYTGVRHHRHSGRRHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKERYKR
        S+LRPQS NAIVPYTG R  RHSGRRHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEER VYQNIGLKDKERYKR
Subjt:  SDLRPQSTNAIVPYTGVRHHRHSGRRHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKERYKR

Query:  ELKEYKEKMRQATDVDGATNYSKHGE
        ELKEYKEKMRQATD+    NYSKHGE
Subjt:  ELKEYKEKMRQATDVDGATNYSKHGE

XP_023535855.1 high mobility group B protein 9-like [Cucurbita pepo subsp. pepo]

4.0e-148

83.13

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Query:  MSPPARTKSWNGGLDKHYPPSLATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSA
        MSPPARTKS NGG+DK YPP LATHDEV+SDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSA
Subjt:  MSPPARTKSWNGGLDKHYPPSLATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSA

Query:  SFVLRKHYLSLLYHYEQVYLFGRQGPICVPQAPFPFGSPTSENELALVEYTPKNTSFSPGPPAE-------------------------------DQPPP
        SFVLRKHYLSLLYHYEQVY+F RQGPIC PQAPF FGSPTSENELALVEYTPK TSFSPGPPAE                               ++P P
Subjt:  SFVLRKHYLSLLYHYEQVYLFGRQGPICVPQAPFPFGSPTSENELALVEYTPKNTSFSPGPPAE-------------------------------DQPPP

Query:  SDLRPQSTNAIVPYTGVRHHRHSGRRHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKERYKR
        SDLRPQ TNAIVPYTG R  RHSGRRHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKERYKR
Subjt:  SDLRPQSTNAIVPYTGVRHHRHSGRRHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKERYKR

Query:  ELKEYKEKMRQATDVDGATNYSKHGE
        ELKEYKEKMR A+D   A NYSK GE
Subjt:  ELKEYKEKMRQATDVDGATNYSKHGE

XP_038899499.1 high mobility group B protein 9-like [Benincasa hispida]

4.4e-155

86.5

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Query:  MSPPARTKSWNGGLDKHYPPSLATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSA
        MSPPA TKSWNGGLDKHYPP LATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSA
Subjt:  MSPPARTKSWNGGLDKHYPPSLATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSA

Query:  SFVLRKHYLSLLYHYEQVYLFGRQGPICVPQAPFPFGSPTSENELALVEYTPKNTSFSPGPPAE-------------------------------DQPPP
        SFVLRKHYLSLLYHYEQVYLFGRQGPICVPQAPFP GSPTSENELALVEYTPK TSFSPGPPAE                               +QPPP
Subjt:  SFVLRKHYLSLLYHYEQVYLFGRQGPICVPQAPFPFGSPTSENELALVEYTPKNTSFSPGPPAE-------------------------------DQPPP

Query:  SDLRPQSTNAIVPYTGVRHHRHSGRRHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKERYKR
        SDLRPQSTNAIVPYTG R +RHSGRRHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEER VYQNIGLKDKERYKR
Subjt:  SDLRPQSTNAIVPYTGVRHHRHSGRRHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKERYKR

Query:  ELKEYKEKMRQATDVDGATNYSKHGE
        ELKEYKEKMRQA+DVDG   YSKHGE
Subjt:  ELKEYKEKMRQATDVDGATNYSKHGE

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L181 Uncharacterized protein

2.5e-156

86.5

Show/hide

Query:  MSPPARTKSWNGGLDKHYPPSLATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSA
        MSPPARTK+WNGGLDKHYPPSLATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSA
Subjt:  MSPPARTKSWNGGLDKHYPPSLATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSA

Query:  SFVLRKHYLSLLYHYEQVYLFGRQGPICVPQAPFPFGSPTSENELALVEYTPKNTSFSPGPPAE-------------------------------DQPPP
        SFVLRKHYLSLLYHYEQVYLFGRQGPICVPQAPFPFGSPTSENELALVEYTPK TSFSPGPP+E                               DQPPP
Subjt:  SFVLRKHYLSLLYHYEQVYLFGRQGPICVPQAPFPFGSPTSENELALVEYTPKNTSFSPGPPAE-------------------------------DQPPP

Query:  SDLRPQSTNAIVPYTGVRHHRHSGRRHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKERYKR
        SDLRP STNAIVPYTG R +RHSGRRHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKERY+R
Subjt:  SDLRPQSTNAIVPYTGVRHHRHSGRRHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKERYKR

Query:  ELKEYKEKMRQATDVDGATNYSKHGE
        ELKEYKEKMR  T+VDGA NYSKHG+
Subjt:  ELKEYKEKMRQATDVDGATNYSKHGE

A0A1S3BUE9 high mobility group B protein 9

9.6e-156

86.2

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Query:  MSPPARTKSWNGGLDKHYPPSLATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSA
        MSPPARTK+WNGGLDKHYPP LATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSA
Subjt:  MSPPARTKSWNGGLDKHYPPSLATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSA

Query:  SFVLRKHYLSLLYHYEQVYLFGRQGPICVPQAPFPFGSPTSENELALVEYTPKNTSFSPGPPAE-------------------------------DQPPP
        SFVLRKHYLSLLYHYEQVYLFGRQGPICVPQAPF FGSPTSENELALVEYTPK TSFSPGPP+E                               +QPPP
Subjt:  SFVLRKHYLSLLYHYEQVYLFGRQGPICVPQAPFPFGSPTSENELALVEYTPKNTSFSPGPPAE-------------------------------DQPPP

Query:  SDLRPQSTNAIVPYTGVRHHRHSGRRHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKERYKR
        SDLRP STNAIVPYTG R HRHSGRRHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKERY+R
Subjt:  SDLRPQSTNAIVPYTGVRHHRHSGRRHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKERYKR

Query:  ELKEYKEKMRQATDVDGATNYSKHGE
        ELKEYKEKMR  TDVDGA NYSKHG+
Subjt:  ELKEYKEKMRQATDVDGATNYSKHGE

A0A5A7VAK3 High mobility group B protein 9

9.6e-156

86.2

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Query:  MSPPARTKSWNGGLDKHYPPSLATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSA
        MSPPARTK+WNGGLDKHYPP LATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSA
Subjt:  MSPPARTKSWNGGLDKHYPPSLATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSA

Query:  SFVLRKHYLSLLYHYEQVYLFGRQGPICVPQAPFPFGSPTSENELALVEYTPKNTSFSPGPPAE-------------------------------DQPPP
        SFVLRKHYLSLLYHYEQVYLFGRQGPICVPQAPF FGSPTSENELALVEYTPK TSFSPGPP+E                               +QPPP
Subjt:  SFVLRKHYLSLLYHYEQVYLFGRQGPICVPQAPFPFGSPTSENELALVEYTPKNTSFSPGPPAE-------------------------------DQPPP

Query:  SDLRPQSTNAIVPYTGVRHHRHSGRRHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKERYKR
        SDLRP STNAIVPYTG R HRHSGRRHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKERY+R
Subjt:  SDLRPQSTNAIVPYTGVRHHRHSGRRHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKERYKR

Query:  ELKEYKEKMRQATDVDGATNYSKHGE
        ELKEYKEKMR  TDVDGA NYSKHG+
Subjt:  ELKEYKEKMRQATDVDGATNYSKHGE

A0A6J1CH52 high mobility group B protein 9

1.1e-148

83.74

Show/hide

Query:  MSPPARTKSWNGGLDKHYPPSLATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSA
        MSPPAR+KSWN G DKHYP +LATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSA
Subjt:  MSPPARTKSWNGGLDKHYPPSLATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSA

Query:  SFVLRKHYLSLLYHYEQVYLFGRQGPICVPQAPFPFGSPTSENELALVEYTPKNTSFSPGPPAE-------------------------------DQPPP
        SFVLRKHYLSLLYHYEQVYLF RQGPICVPQAPF FGSP+SENELALVEYTPK TSFSPGPPAE                               +QP P
Subjt:  SFVLRKHYLSLLYHYEQVYLFGRQGPICVPQAPFPFGSPTSENELALVEYTPKNTSFSPGPPAE-------------------------------DQPPP

Query:  SDLRPQSTNAIVPYTGVRHHRHSGRRHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKERYKR
        S+LRPQS NAIVPYTG R  RHSGRRHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEER VYQNIGLKDKERYKR
Subjt:  SDLRPQSTNAIVPYTGVRHHRHSGRRHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKERYKR

Query:  ELKEYKEKMRQATDVDGATNYSKHGE
        ELKEYKEKMRQATD+    NYSKHGE
Subjt:  ELKEYKEKMRQATDVDGATNYSKHGE

E5GCD0 High mobility group family

9.6e-156

86.2

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Query:  MSPPARTKSWNGGLDKHYPPSLATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSA
        MSPPARTK+WNGGLDKHYPP LATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSA
Subjt:  MSPPARTKSWNGGLDKHYPPSLATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSA

Query:  SFVLRKHYLSLLYHYEQVYLFGRQGPICVPQAPFPFGSPTSENELALVEYTPKNTSFSPGPPAE-------------------------------DQPPP
        SFVLRKHYLSLLYHYEQVYLFGRQGPICVPQAPF FGSPTSENELALVEYTPK TSFSPGPP+E                               +QPPP
Subjt:  SFVLRKHYLSLLYHYEQVYLFGRQGPICVPQAPFPFGSPTSENELALVEYTPKNTSFSPGPPAE-------------------------------DQPPP

Query:  SDLRPQSTNAIVPYTGVRHHRHSGRRHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKERYKR
        SDLRP STNAIVPYTG R HRHSGRRHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKERY+R
Subjt:  SDLRPQSTNAIVPYTGVRHHRHSGRRHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKERYKR

Query:  ELKEYKEKMRQATDVDGATNYSKHGE
        ELKEYKEKMR  TDVDGA NYSKHG+
Subjt:  ELKEYKEKMRQATDVDGATNYSKHGE

SwissProt top hits

e value

%identity

Alignment

Q68CP9 AT-rich interactive domain-containing protein 2

4.2e-15

40.52

Show/hide

Query:  IVFWDTLRRFHFMMNTKF-MIPVIGGKELDLHVLYSEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSASFVLRKHYLSLLYHYEQVYLFGR---QGPIC
        + F D LR+FH    + F  IP +GGKELDLH LY+ VT  GG  KV  + +W E+   F F  + ++A+F L+++YL  L  YE+V+ FG    + P  
Subjt:  IVFWDTLRRFHFMMNTKF-MIPVIGGKELDLHVLYSEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSASFVLRKHYLSLLYHYEQVYLFGR---QGPIC

Query:  VPQAPFPFGS-PTSEN
         P+   P G+ P+S N
Subjt:  VPQAPFPFGS-PTSEN

Q9LG02 Putative high mobility group B protein 11

1.3e-29

31.23

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Query:  PARTKSWNGGLDKHYPPSLATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSASFV
        PA   + +  +  H       + +++ +P +FW+ LR FH   + KF IP++GGK LDLH L++EVT RGG EKV+ +++ +EV   F F  T T+++FV
Subjt:  PARTKSWNGGLDKHYPPSLATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSASFV

Query:  LRKHYLSLLYHYEQVYLFGRQGPICVPQAPFPFGSPTSENELALVEYTPKNTS-------FSPGPPAE---DQPPPSDLRPQSTNAIVPYTGVRHH----
        LRK YL +L+ +E +Y F         QAP    S   E E AL     K+ +         PG       D    S     +        G+ +H    
Subjt:  LRKHYLSLLYHYEQVYLFGRQGPICVPQAPFPFGSPTSENELALVEYTPKNTS-------FSPGPPAE---DQPPPSDLRPQSTNAIVPYTGVRHH----

Query:  RHSGRRHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKERYKRELKEYKEKMR-QATDVDGAT
           G++  +S +      PK  R+GYNFF AE+  ++K+    ++    K  G  W NLS  +R VY     +D +RYK E+ +Y+  M  +  ++  AT
Subjt:  RHSGRRHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKERYKRELKEYKEKMR-QATDVDGAT

Query:  N
        +
Subjt:  N

Q9LTT3 High mobility group B protein 10

4.3e-36

36.86

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Query:  ATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSASFVLRKHYLSLLYHYEQVYLFG
        A +D+++ +  +FW+ LR F  + +    +P +GG  LDLH L+ EVT RGG E+VV ++KW+EV   F F  T TSASFVLRK+YL  L+  E VY   
Subjt:  ATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSASFVLRKHYLSLLYHYEQVYLFG

Query:  RQGPICVPQA------PFPFGSPTSENELALVEYTPKNTSFSPGPPAEDQPPPSDLRPQSTNAI---VPYTGVRHH----------RHSGRRHRRSRRKG
         + P+   Q+           SP  E  +   +   +   F  G           L  Q    +   +P T  +            + S RRHR+  +  
Subjt:  RQGPICVPQA------PFPFGSPTSENELALVEYTPKNTSFSPGPPAEDQPPPSDLRPQSTNAI---VPYTGVRHH----------RHSGRRHRRSRRKG

Query:  --DPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKERYKRELKEYK
          D   PK +RSGYNFFFAE++ +LK  Y  +ER  TK IG  W+NL+  E+ VYQ+ G+KD ERY+ E+ EYK
Subjt:  --DPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKERYKRELKEYK

Q9MAT6 High mobility group B protein 15

2.1e-51

37.27

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Query:  ATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSASFVLRKHYLSLLYHYEQVYLFG
        AT++ V++DP +F  +L R H ++ TKFM+P+IGG++LDLH L+ EVT RGG  K++ E++W+EV + F F PT T+AS+VLRK+Y SLL +YEQ+Y F 
Subjt:  ATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSASFVLRKHYLSLLYHYEQVYLFG

Query:  RQGPICVPQAPFPFGSP-------TSENELALVEYTPK---NTS-FSPGPPAED----------------------------------QPPPSDLRPQST
          G I       P   P           EL  + +TP+   NT+ F  G  A                                    Q   S   PQ +
Subjt:  RQGPICVPQAPFPFGSP-------TSENELALVEYTPK---NTS-FSPGPPAED----------------------------------QPPPSDLRPQST

Query:  NAIVPYT------------GVRHHRHSGRRHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKE
        + ++P T            GV   R   RR +   ++ DP+HPKPNRSGYNFFFAE+H +LK L+P ++R+ ++MIGE WN L+ +E+++YQ   ++DKE
Subjt:  NAIVPYT------------GVRHHRHSGRRHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKE

Query:  RYKRELKEYKEKMRQATDVDGA
        RY+ E+++Y+EK +    +  A
Subjt:  RYKRELKEYKEKMRQATDVDGA

Q9SGS2 High mobility group B protein 9

2.0e-89

59.21

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Query:  KHYPPSLATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSASFVLRKHYLSLLYHY
        K YP  LA H+ V+ D  VFWDTLRRFH +M+TKFMIPVIGGKELDLHVLY EVTRRGG+EKVV EKKWREVG VF+FS TTTSASFVLRKHYL+LL+HY
Subjt:  KHYPPSLATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSASFVLRKHYLSLLYHY

Query:  EQVYLFGRQGPICVPQAPFPFGSPTSENELALVEYTPKNTSF-SPGPPAED-------------------------------------QPPPSDLRPQS-
        EQV+LF  +GP+  P A F   +P++  E+ALVEYTP +  + +  PP++                                      QP PS   P + 
Subjt:  EQVYLFGRQGPICVPQAPFPFGSPTSENELALVEYTPKNTSF-SPGPPAED-------------------------------------QPPPSDLRPQS-

Query:  -TNAIVPYTGVRHHRHSGRRHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKERYKRELKEYK
          NA+VPY      R    + RRSRR+ DPN+PKPNRSGYNFFFAEKH KLKSLYPN+EREFTK+IGESW+NLS EERMVYQ+IGLKDKERY+REL EY+
Subjt:  -TNAIVPYTGVRHHRHSGRRHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKERYKRELKEYK

Query:  EKMR
        E +R
Subjt:  EKMR

Arabidopsis top hits

e value

%identity

Alignment

AT1G04880.1 HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain

1.5e-52

37.27

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Query:  ATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSASFVLRKHYLSLLYHYEQVYLFG
        AT++ V++DP +F  +L R H ++ TKFM+P+IGG++LDLH L+ EVT RGG  K++ E++W+EV + F F PT T+AS+VLRK+Y SLL +YEQ+Y F 
Subjt:  ATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSASFVLRKHYLSLLYHYEQVYLFG

Query:  RQGPICVPQAPFPFGSP-------TSENELALVEYTPK---NTS-FSPGPPAED----------------------------------QPPPSDLRPQST
          G I       P   P           EL  + +TP+   NT+ F  G  A                                    Q   S   PQ +
Subjt:  RQGPICVPQAPFPFGSP-------TSENELALVEYTPK---NTS-FSPGPPAED----------------------------------QPPPSDLRPQST

Query:  NAIVPYT------------GVRHHRHSGRRHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKE
        + ++P T            GV   R   RR +   ++ DP+HPKPNRSGYNFFFAE+H +LK L+P ++R+ ++MIGE WN L+ +E+++YQ   ++DKE
Subjt:  NAIVPYT------------GVRHHRHSGRRHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKE

Query:  RYKRELKEYKEKMRQATDVDGA
        RY+ E+++Y+EK +    +  A
Subjt:  RYKRELKEYKEKMRQATDVDGA

AT1G55650.1 HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain

9.5e-31

31.23

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Query:  PARTKSWNGGLDKHYPPSLATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSASFV
        PA   + +  +  H       + +++ +P +FW+ LR FH   + KF IP++GGK LDLH L++EVT RGG EKV+ +++ +EV   F F  T T+++FV
Subjt:  PARTKSWNGGLDKHYPPSLATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSASFV

Query:  LRKHYLSLLYHYEQVYLFGRQGPICVPQAPFPFGSPTSENELALVEYTPKNTS-------FSPGPPAE---DQPPPSDLRPQSTNAIVPYTGVRHH----
        LRK YL +L+ +E +Y F         QAP    S   E E AL     K+ +         PG       D    S     +        G+ +H    
Subjt:  LRKHYLSLLYHYEQVYLFGRQGPICVPQAPFPFGSPTSENELALVEYTPKNTS-------FSPGPPAE---DQPPPSDLRPQSTNAIVPYTGVRHH----

Query:  RHSGRRHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKERYKRELKEYKEKMR-QATDVDGAT
           G++  +S +      PK  R+GYNFF AE+  ++K+    ++    K  G  W NLS  +R VY     +D +RYK E+ +Y+  M  +  ++  AT
Subjt:  RHSGRRHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKERYKRELKEYKEKMR-QATDVDGAT

Query:  N
        +
Subjt:  N

AT1G76110.1 HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain

1.4e-90

59.21

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Query:  KHYPPSLATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSASFVLRKHYLSLLYHY
        K YP  LA H+ V+ D  VFWDTLRRFH +M+TKFMIPVIGGKELDLHVLY EVTRRGG+EKVV EKKWREVG VF+FS TTTSASFVLRKHYL+LL+HY
Subjt:  KHYPPSLATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSASFVLRKHYLSLLYHY

Query:  EQVYLFGRQGPICVPQAPFPFGSPTSENELALVEYTPKNTSF-SPGPPAED-------------------------------------QPPPSDLRPQS-
        EQV+LF  +GP+  P A F   +P++  E+ALVEYTP +  + +  PP++                                      QP PS   P + 
Subjt:  EQVYLFGRQGPICVPQAPFPFGSPTSENELALVEYTPKNTSF-SPGPPAED-------------------------------------QPPPSDLRPQS-

Query:  -TNAIVPYTGVRHHRHSGRRHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKERYKRELKEYK
          NA+VPY      R    + RRSRR+ DPN+PKPNRSGYNFFFAEKH KLKSLYPN+EREFTK+IGESW+NLS EERMVYQ+IGLKDKERY+REL EY+
Subjt:  -TNAIVPYTGVRHHRHSGRRHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKERYKRELKEYK

Query:  EKMR
        E +R
Subjt:  EKMR

AT3G13350.1 HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain

3.0e-37

36.86

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Query:  ATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSASFVLRKHYLSLLYHYEQVYLFG
        A +D+++ +  +FW+ LR F  + +    +P +GG  LDLH L+ EVT RGG E+VV ++KW+EV   F F  T TSASFVLRK+YL  L+  E VY   
Subjt:  ATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSASFVLRKHYLSLLYHYEQVYLFG

Query:  RQGPICVPQA------PFPFGSPTSENELALVEYTPKNTSFSPGPPAEDQPPPSDLRPQSTNAI---VPYTGVRHH----------RHSGRRHRRSRRKG
         + P+   Q+           SP  E  +   +   +   F  G           L  Q    +   +P T  +            + S RRHR+  +  
Subjt:  RQGPICVPQA------PFPFGSPTSENELALVEYTPKNTSFSPGPPAEDQPPPSDLRPQSTNAI---VPYTGVRHH----------RHSGRRHRRSRRKG

Query:  --DPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKERYKRELKEYK
          D   PK +RSGYNFFFAE++ +LK  Y  +ER  TK IG  W+NL+  E+ VYQ+ G+KD ERY+ E+ EYK
Subjt:  --DPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKERYKRELKEYK

AT3G28730.1 high mobility group

4.0e-05

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Query:  RHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPN-REREFTKMIGESWNNLSPEERMVYQNIGLKDKERYKRELKEYKEKMRQATD
        + ++ ++K DPN PK   SG+ FF   +   +K  +P     E  K++G+ W  +S +++  Y+     DK+RYK E+ +YK       D
Subjt:  RHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPN-REREFTKMIGESWNNLSPEERMVYQNIGLKDKERYKRELKEYKEKMRQATD

Sequences

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CDS sequence

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ATGTCACCGCCGGCTAGGACTAAGAGCTGGAACGGTGGACTCGATAAACATTATCCTCCGTCGCTCGCCACCCACGATGAAGTTATTTCCGACCCCATTGTTTTTTGGGA
TACTTTGAGGCGTTTCCATTTTATGATGAACACAAAGTTCATGATTCCTGTGATTGGAGGGAAGGAGCTAGACTTGCATGTTTTATATTCAGAGGTTACAAGAAGGGGAG
GGCATGAAAAGGTTGTTGCAGAGAAGAAATGGAGAGAAGTTGGAAGTGTATTCAAGTTTTCTCCTACAACGACGAGTGCTTCCTTTGTATTGAGAAAACATTATCTAAGT
CTTCTTTACCATTACGAGCAAGTTTATTTGTTCGGCCGTCAGGGCCCCATCTGTGTCCCTCAAGCGCCATTTCCTTTTGGTAGCCCTACCAGTGAAAACGAATTGGCTCT
TGTGGAATATACTCCCAAAAATACGTCGTTTTCCCCTGGTCCGCCCGCTGAAGACCAGCCACCTCCGTCGGATCTCCGCCCTCAGTCTACCAACGCCATTGTACCGTATA
CCGGCGTCAGACATCATCGACATTCCGGTCGGCGGCACCGGAGGAGCCGGAGAAAGGGAGATCCGAACCACCCAAAACCAAACAGAAGTGGGTATAATTTCTTCTTTGCA
GAGAAGCATTACAAGCTCAAATCTCTGTACCCAAACAGAGAGAGGGAGTTCACTAAGATGATTGGAGAGTCGTGGAACAATCTTAGCCCTGAAGAAAGGATGGTTTATCA
AAACATTGGGCTGAAAGACAAGGAAAGATACAAGAGAGAGTTGAAAGAGTATAAGGAGAAAATGAGGCAGGCAACTGATGTTGATGGAGCTACTAACTATTCAAAACATG
GAGAGTAA

mRNA sequence

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Protein sequence

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MSPPARTKSWNGGLDKHYPPSLATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSASFVLRKHYLS
LLYHYEQVYLFGRQGPICVPQAPFPFGSPTSENELALVEYTPKNTSFSPGPPAEDQPPPSDLRPQSTNAIVPYTGVRHHRHSGRRHRRSRRKGDPNHPKPNRSGYNFFFA
EKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKERYKRELKEYKEKMRQATDVDGATNYSKHGE

HG10013916 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome