CuGenDBv2

Gene ID	HG10013953
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	protein SPA, chloroplastic
Genome location	Chr02:6348658..6349137
RNA-Seq Expression	HG10013953
Synteny	HG10013953
Gene Ontology terms	GO:0010206 - photosystem II repair (biological process) GO:0009507 - chloroplast (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0003756 - protein disulfide isomerase activity (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG7024161.1 Protein SPA, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]

1.5e-31

89.16

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Query:  MTVASSLSRLHSPFLYCPLKPTSSTSLSVTFSRNQRSPASYPRIRAVDLDQNTVVALSVGLVSVAVGIGIPVFYESQIDNAVR
        MTVA SLSRLHSPFLYCPLKPTSS SLS+TFSRNQRSPASYPRIRA+DLDQNTVVALSVGL S+AVGIGIPVFYE+QIDNA +
Subjt:  MTVASSLSRLHSPFLYCPLKPTSSTSLSVTFSRNQRSPASYPRIRAVDLDQNTVVALSVGLVSVAVGIGIPVFYESQIDNAVR

XP_004136388.1 protein disulfide-isomerase LQY1, chloroplastic [Cucumis sativus]

3.4e-31

89.16

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Query:  MTVASSLSRLHSPFLYCPLKPTSSTSLSVTFSRNQRSPASYPRIRAVDLDQNTVVALSVGLVSVAVGIGIPVFYESQIDNAVR
        MTVA SLSRLHSPFLYCPLKPT STSLSVTFS NQRSP SYPRIRA+DLDQNTVVALSVGLVSVA+GIGIPVFYE+QIDNA +
Subjt:  MTVASSLSRLHSPFLYCPLKPTSSTSLSVTFSRNQRSPASYPRIRAVDLDQNTVVALSVGLVSVAVGIGIPVFYESQIDNAVR

XP_008466492.1 PREDICTED: protein SPA, chloroplastic [Cucumis melo]

6.9e-32

91.57

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Query:  MTVASSLSRLHSPFLYCPLKPTSSTSLSVTFSRNQRSPASYPRIRAVDLDQNTVVALSVGLVSVAVGIGIPVFYESQIDNAVR
        MTVA SLSRLHSPFLYCPLKPTSSTSLSVTFS NQRSP SYPRIRA+DLDQNTVVALSVGLVSVAVGIGIPVFYE+QIDNA +
Subjt:  MTVASSLSRLHSPFLYCPLKPTSSTSLSVTFSRNQRSPASYPRIRAVDLDQNTVVALSVGLVSVAVGIGIPVFYESQIDNAVR

XP_022936404.1 protein SPA, chloroplastic [Cucurbita moschata]

1.5e-31

89.16

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Query:  MTVASSLSRLHSPFLYCPLKPTSSTSLSVTFSRNQRSPASYPRIRAVDLDQNTVVALSVGLVSVAVGIGIPVFYESQIDNAVR
        MTVA SLSRLHSPFLYCPLKPTSS SLS+TFSRNQRSPASYPRIRA+DLDQNTVVALSVGL S+AVGIGIPVFYE+QIDNA +
Subjt:  MTVASSLSRLHSPFLYCPLKPTSSTSLSVTFSRNQRSPASYPRIRAVDLDQNTVVALSVGLVSVAVGIGIPVFYESQIDNAVR

XP_038899789.1 protein SPA, chloroplastic [Benincasa hispida]

1.4e-32

91.57

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Query:  MTVASSLSRLHSPFLYCPLKPTSSTSLSVTFSRNQRSPASYPRIRAVDLDQNTVVALSVGLVSVAVGIGIPVFYESQIDNAVR
        MTVA S+SRLHSPFLYCPLKPTSSTSLSVTFSRNQRSPA+YPRIRA+DLDQNTVVALSVGLVSVAVGIGIPVFYE+QIDNA +
Subjt:  MTVASSLSRLHSPFLYCPLKPTSSTSLSVTFSRNQRSPASYPRIRAVDLDQNTVVALSVGLVSVAVGIGIPVFYESQIDNAVR

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LJ55 Uncharacterized protein

1.7e-31

89.16

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Query:  MTVASSLSRLHSPFLYCPLKPTSSTSLSVTFSRNQRSPASYPRIRAVDLDQNTVVALSVGLVSVAVGIGIPVFYESQIDNAVR
        MTVA SLSRLHSPFLYCPLKPT STSLSVTFS NQRSP SYPRIRA+DLDQNTVVALSVGLVSVA+GIGIPVFYE+QIDNA +
Subjt:  MTVASSLSRLHSPFLYCPLKPTSSTSLSVTFSRNQRSPASYPRIRAVDLDQNTVVALSVGLVSVAVGIGIPVFYESQIDNAVR

A0A1S3CRE4 protein SPA, chloroplastic

3.4e-32

91.57

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Query:  MTVASSLSRLHSPFLYCPLKPTSSTSLSVTFSRNQRSPASYPRIRAVDLDQNTVVALSVGLVSVAVGIGIPVFYESQIDNAVR
        MTVA SLSRLHSPFLYCPLKPTSSTSLSVTFS NQRSP SYPRIRA+DLDQNTVVALSVGLVSVAVGIGIPVFYE+QIDNA +
Subjt:  MTVASSLSRLHSPFLYCPLKPTSSTSLSVTFSRNQRSPASYPRIRAVDLDQNTVVALSVGLVSVAVGIGIPVFYESQIDNAVR

A0A6J1CMU6 protein SPA, chloroplastic

1.1e-30

87.95

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Query:  MTVASSLSRLHSPFLYCPLKPTSSTSLSVTFSRNQRSPASYPRIRAVDLDQNTVVALSVGLVSVAVGIGIPVFYESQIDNAVR
        MT A SLSRLHSPFLY PLKPTS+ SLS+TFSRNQRSPASYPRIRA+DLDQNTVVALSVGLVSVAVGIGIPVFYE+QIDNA +
Subjt:  MTVASSLSRLHSPFLYCPLKPTSSTSLSVTFSRNQRSPASYPRIRAVDLDQNTVVALSVGLVSVAVGIGIPVFYESQIDNAVR

A0A6J1F877 protein SPA, chloroplastic

7.5e-32

89.16

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Query:  MTVASSLSRLHSPFLYCPLKPTSSTSLSVTFSRNQRSPASYPRIRAVDLDQNTVVALSVGLVSVAVGIGIPVFYESQIDNAVR
        MTVA SLSRLHSPFLYCPLKPTSS SLS+TFSRNQRSPASYPRIRA+DLDQNTVVALSVGL S+AVGIGIPVFYE+QIDNA +
Subjt:  MTVASSLSRLHSPFLYCPLKPTSSTSLSVTFSRNQRSPASYPRIRAVDLDQNTVVALSVGLVSVAVGIGIPVFYESQIDNAVR

A0A6J1IFD3 protein SPA, chloroplastic

7.5e-32

89.16

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Query:  MTVASSLSRLHSPFLYCPLKPTSSTSLSVTFSRNQRSPASYPRIRAVDLDQNTVVALSVGLVSVAVGIGIPVFYESQIDNAVR
        MTVA SLSRLHSPFLYCPLKPTSS SLS+TFSRNQRSPASYPRIRA+DLDQNTVVALSVGL S+AVGIGIPVFYE+QIDNA +
Subjt:  MTVASSLSRLHSPFLYCPLKPTSSTSLSVTFSRNQRSPASYPRIRAVDLDQNTVVALSVGLVSVAVGIGIPVFYESQIDNAVR

SwissProt top hits

e value

%identity

Alignment

K4BVL1 Protein SPA, chloroplastic

3.8e-17

58.82

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Query:  MTVASSLSRLHSPFLYCPLK-PT-SSTSLSVTFSRNQRSPASYPRIRAVDLDQNTVVALSVGLVSVAVGIGIPVFYESQIDNAVR
        M  A SLSR  SPF+  PLK PT SS+  +  F +  R   SYP I+AVDLDQNTV+A++VG++SVA+G+GIPVFYE+QIDNA +
Subjt:  MTVASSLSRLHSPFLYCPLK-PT-SSTSLSVTFSRNQRSPASYPRIRAVDLDQNTVVALSVGLVSVAVGIGIPVFYESQIDNAVR

Q8GSJ6 Protein disulfide-isomerase LQY1, chloroplastic

1.9e-16

61.73

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Query:  ASSLSRLHSPFLYCPLKPTSSTSLSVTFSRNQRSPA-SYPRIRAVDLDQNTVVALSVGLVSVAVGIGIPVFYESQIDNAVR
        A S  RLHSPF++CP+  T S+      +RN RSP+ SYPRI+A +LD NTVVA+SVG+ SVA+GIGIPVFYE+QIDNA +
Subjt:  ASSLSRLHSPFLYCPLKPTSSTSLSVTFSRNQRSPA-SYPRIRAVDLDQNTVVALSVGLVSVAVGIGIPVFYESQIDNAVR

Arabidopsis top hits

e value

%identity

Alignment

AT1G75690.1 DnaJ/Hsp40 cysteine-rich domain superfamily protein

1.4e-17

61.73

Show/hide

Query:  ASSLSRLHSPFLYCPLKPTSSTSLSVTFSRNQRSPA-SYPRIRAVDLDQNTVVALSVGLVSVAVGIGIPVFYESQIDNAVR
        A S  RLHSPF++CP+  T S+      +RN RSP+ SYPRI+A +LD NTVVA+SVG+ SVA+GIGIPVFYE+QIDNA +
Subjt:  ASSLSRLHSPFLYCPLKPTSSTSLSVTFSRNQRSPA-SYPRIRAVDLDQNTVVALSVGLVSVAVGIGIPVFYESQIDNAVR

Sequences

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CDS sequence

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ATGACAGTAGCATCTTCGCTTTCTCGCCTCCACTCTCCATTTCTGTATTGTCCTCTCAAGCCGACTTCATCTACCTCTCTTTCTGTCACATTCTCTAGAAATCAACGATC
GCCAGCATCATATCCACGCATCAGAGCAGTAGATCTTGACCAAAACACGGTGGTGGCACTTTCAGTTGGGCTGGTGAGTGTTGCAGTTGGAATAGGCATTCCGGTCTTCT
ATGAGTCCCAAATTGATAATGCTGTAAGAGTTGTTGACCTGTTCTTCAAGTCTGTGCCTAATAAACTGGGTTTTCTTGCACTTCCAGCTCATAATCCATGTGTTTGCGTT
GTAGGCAAAGCGTGA

mRNA sequence

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Protein sequence

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MTVASSLSRLHSPFLYCPLKPTSSTSLSVTFSRNQRSPASYPRIRAVDLDQNTVVALSVGLVSVAVGIGIPVFYESQIDNAVRVVDLFFKSVPNKLGFLALPAHNPCVCV
VGKA

HG10013953 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome