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HG10013975 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10013975
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionS-type anion channel SLAH4-like
Genome locationChr02:6533425..6533700
RNA-Seq ExpressionHG10013975
SyntenyHG10013975
Gene Ontology termsGO:0006873 - cellular ion homeostasis (biological process)
GO:0015698 - inorganic anion transport (biological process)
GO:0034220 - ion transmembrane transport (biological process)
GO:0005886 - plasma membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0008308 - voltage-gated anion channel activity (molecular function)
InterPro domainsIPR004695 - Transporter protein SLAC1/Mae1/ Ssu1/TehA
IPR030183 - S-type anion channel
IPR038665 - Voltage-dependent anion channel superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004147871.1 S-type anion channel SLAH4 [Cucumis sativus]8.5e-3385.71Show/hide
Query:  MKRFNIAWWAFSFPISALALASIEYHHQVKAFPAKILMLILLIISVFVVISLIAATLLNSNLLLPDDDPLFNPSTQRNSTLDESHRQESLT
        MKRF IAWWAFSFPISALA+ASI+YHHQV+A PAKILML+LL ISVFVV+SL+AAT+LNS LLLPDDDPLFNPSTQRNSTLD SHRQE LT
Subjt:  MKRFNIAWWAFSFPISALALASIEYHHQVKAFPAKILMLILLIISVFVVISLIAATLLNSNLLLPDDDPLFNPSTQRNSTLDESHRQESLT

XP_008466511.1 PREDICTED: S-type anion channel SLAH4-like [Cucumis melo]2.2e-3389.77Show/hide
Query:  MKRFNIAWWAFSFPISALALASIEYHHQVKAFPAKILMLILLIISVFVVISLIAATLLNSNLLLPDDDPLFNPSTQRNSTLDESHRQE
        MKRFNIAWWAFSFPISALALASI+YHHQVKA PAKILML+LL ISVFVV+SL+AAT+ NS LLLPDDDPLFNPSTQRNSTLDESHRQE
Subjt:  MKRFNIAWWAFSFPISALALASIEYHHQVKAFPAKILMLILLIISVFVVISLIAATLLNSNLLLPDDDPLFNPSTQRNSTLDESHRQE

XP_022137574.1 S-type anion channel SLAH1-like [Momordica charantia]6.8e-2268.54Show/hide
Query:  MKRFNIAWWAFSFPISALALASIEYHHQVKAFPAKILMLILLIISVFVVISLIAATLLNSNLLLPDDDPLFNPSTQRNSTLDESHRQES
        MKRFNIAWWAFSFP+SALALASIEYHHQV+A PAKILM +LL +SVFV++SL+AATLLNS++LL DDDPL N          E HR+++
Subjt:  MKRFNIAWWAFSFPISALALASIEYHHQVKAFPAKILMLILLIISVFVVISLIAATLLNSNLLLPDDDPLFNPSTQRNSTLDESHRQES

XP_022981732.1 S-type anion channel SLAH4-like [Cucurbita maxima]2.3e-1759.34Show/hide
Query:  MKRFNIAWWAFSFPISALALASIEYHHQVKAFPAKILMLILLIISVFVVISLIAATLLNSNLLLPDDDPLFN-PSTQRNSTLDESHRQESL
        MKRFNIAWWAFSFP+SALALAS+EYH  ++  PAK+LML+LL +SV V + L   TLLNS+LLL DDD L+N PS   +S+L ++   +S+
Subjt:  MKRFNIAWWAFSFPISALALASIEYHHQVKAFPAKILMLILLIISVFVVISLIAATLLNSNLLLPDDDPLFN-PSTQRNSTLDESHRQESL

XP_038896582.1 S-type anion channel SLAH4-like [Benincasa hispida]4.8e-3693.41Show/hide
Query:  MKRFNIAWWAFSFPISALALASIEYHHQVKAFPAKILMLILLIISVFVVISLIAATLLNSNLLLPDDDPLFNPSTQRNSTLDESHRQESLT
        MKRFNIAWWAFSFPISALALASIEYHHQVKA PAK+LML+LL ISVFVVISLIAAT+LNS LLLPDDDPLFNPSTQRNSTLDESHRQESLT
Subjt:  MKRFNIAWWAFSFPISALALASIEYHHQVKAFPAKILMLILLIISVFVVISLIAATLLNSNLLLPDDDPLFNPSTQRNSTLDESHRQESLT

TrEMBL top hitse value%identityAlignment
A0A0A0LE61 Uncharacterized protein4.1e-3385.71Show/hide
Query:  MKRFNIAWWAFSFPISALALASIEYHHQVKAFPAKILMLILLIISVFVVISLIAATLLNSNLLLPDDDPLFNPSTQRNSTLDESHRQESLT
        MKRF IAWWAFSFPISALA+ASI+YHHQV+A PAKILML+LL ISVFVV+SL+AAT+LNS LLLPDDDPLFNPSTQRNSTLD SHRQE LT
Subjt:  MKRFNIAWWAFSFPISALALASIEYHHQVKAFPAKILMLILLIISVFVVISLIAATLLNSNLLLPDDDPLFNPSTQRNSTLDESHRQESLT

A0A1S3CRG8 S-type anion channel SLAH4-like1.1e-3389.77Show/hide
Query:  MKRFNIAWWAFSFPISALALASIEYHHQVKAFPAKILMLILLIISVFVVISLIAATLLNSNLLLPDDDPLFNPSTQRNSTLDESHRQE
        MKRFNIAWWAFSFPISALALASI+YHHQVKA PAKILML+LL ISVFVV+SL+AAT+ NS LLLPDDDPLFNPSTQRNSTLDESHRQE
Subjt:  MKRFNIAWWAFSFPISALALASIEYHHQVKAFPAKILMLILLIISVFVVISLIAATLLNSNLLLPDDDPLFNPSTQRNSTLDESHRQE

A0A6J1C7M1 S-type anion channel SLAH1-like3.3e-2268.54Show/hide
Query:  MKRFNIAWWAFSFPISALALASIEYHHQVKAFPAKILMLILLIISVFVVISLIAATLLNSNLLLPDDDPLFNPSTQRNSTLDESHRQES
        MKRFNIAWWAFSFP+SALALASIEYHHQV+A PAKILM +LL +SVFV++SL+AATLLNS++LL DDDPL N          E HR+++
Subjt:  MKRFNIAWWAFSFPISALALASIEYHHQVKAFPAKILMLILLIISVFVVISLIAATLLNSNLLLPDDDPLFNPSTQRNSTLDESHRQES

A0A6J1FJ77 S-type anion channel SLAH1-like2.1e-1657.14Show/hide
Query:  MKRFNIAWWAFSFPISALALASIEYHHQVKAFPAKILMLILLIISVFVVISLIAATLLNSNLLLPDDDPLFN-PSTQRNSTLDESHRQESL
        MKRFNIAWWAFSFP+SALALAS+EYH  ++  PAK+LML+LL +SV V + L   TLLNS++L  DDD L+N PS   +S+L  +    S+
Subjt:  MKRFNIAWWAFSFPISALALASIEYHHQVKAFPAKILMLILLIISVFVVISLIAATLLNSNLLLPDDDPLFN-PSTQRNSTLDESHRQESL

A0A6J1IUT7 S-type anion channel SLAH4-like1.1e-1759.34Show/hide
Query:  MKRFNIAWWAFSFPISALALASIEYHHQVKAFPAKILMLILLIISVFVVISLIAATLLNSNLLLPDDDPLFN-PSTQRNSTLDESHRQESL
        MKRFNIAWWAFSFP+SALALAS+EYH  ++  PAK+LML+LL +SV V + L   TLLNS+LLL DDD L+N PS   +S+L ++   +S+
Subjt:  MKRFNIAWWAFSFPISALALASIEYHHQVKAFPAKILMLILLIISVFVVISLIAATLLNSNLLLPDDDPLFN-PSTQRNSTLDESHRQESL

SwissProt top hitse value%identityAlignment
A8MRV9 S-type anion channel SLAH48.9e-0947.22Show/hide
Query:  MKRFNIAWWAFSFPISALALASIEYHHQVKAFPAKILMLILLIISVFVVISLIAATLLNSNLLLPDDDPLFN
        +KRFN+AWWA+SFPI+ LAL S++Y  +VK   A +LM I   +SV + IS++  T  NS  LL  D  L++
Subjt:  MKRFNIAWWAFSFPISALALASIEYHHQVKAFPAKILMLILLIISVFVVISLIAATLLNSNLLLPDDDPLFN

Q5E930 S-type anion channel SLAH13.4e-0841.76Show/hide
Query:  MKRFNIAWWAFSFPISALALASIEYHHQVKAFPAKILMLILLIISVFVVISLIAATLLNSNLLLPDDDPLFNPSTQRNSTLDESHRQESLT
        MKRFN+AWWA+SFP++ LAL S++Y  +VK      LMLI   ISV + + ++  T  NSN LL  D  L        S  D   +Q++L+
Subjt:  MKRFNIAWWAFSFPISALALASIEYHHQVKAFPAKILMLILLIISVFVVISLIAATLLNSNLLLPDDDPLFNPSTQRNSTLDESHRQESLT

Q9LD83 Guard cell S-type anion channel SLAC15.1e-0435.29Show/hide
Query:  RFNIAWWAFSFPISALALASIEYHHQVKAFPAKILMLILLIISVFVVISLIAATLLNS---NLLLPDD
        +F++AWW+++FP++  ++A+I+Y   V  +P++ L L L  IS  +V  L  +TLL++     L P+D
Subjt:  RFNIAWWAFSFPISALALASIEYHHQVKAFPAKILMLILLIISVFVVISLIAATLLNS---NLLLPDD

Arabidopsis top hitse value%identityAlignment
AT1G12480.1 C4-dicarboxylate transporter/malic acid transport protein3.6e-0535.29Show/hide
Query:  RFNIAWWAFSFPISALALASIEYHHQVKAFPAKILMLILLIISVFVVISLIAATLLNS---NLLLPDD
        +F++AWW+++FP++  ++A+I+Y   V  +P++ L L L  IS  +V  L  +TLL++     L P+D
Subjt:  RFNIAWWAFSFPISALALASIEYHHQVKAFPAKILMLILLIISVFVVISLIAATLLNS---NLLLPDD

AT1G62262.1 SLAC1 homologue 46.4e-1047.22Show/hide
Query:  MKRFNIAWWAFSFPISALALASIEYHHQVKAFPAKILMLILLIISVFVVISLIAATLLNSNLLLPDDDPLFN
        +KRFN+AWWA+SFPI+ LAL S++Y  +VK   A +LM I   +SV + IS++  T  NS  LL  D  L++
Subjt:  MKRFNIAWWAFSFPISALALASIEYHHQVKAFPAKILMLILLIISVFVVISLIAATLLNSNLLLPDDDPLFN

AT1G62280.1 SLAC1 homologue 12.4e-0941.76Show/hide
Query:  MKRFNIAWWAFSFPISALALASIEYHHQVKAFPAKILMLILLIISVFVVISLIAATLLNSNLLLPDDDPLFNPSTQRNSTLDESHRQESLT
        MKRFN+AWWA+SFP++ LAL S++Y  +VK      LMLI   ISV + + ++  T  NSN LL  D  L        S  D   +Q++L+
Subjt:  MKRFNIAWWAFSFPISALALASIEYHHQVKAFPAKILMLILLIISVFVVISLIAATLLNSNLLLPDDDPLFNPSTQRNSTLDESHRQESLT

AT4G27970.1 SLAC1 homologue 22.3e-0432.35Show/hide
Query:  RFNIAWWAFSFPISALALASIEYHHQVKAFPAKILMLILLIISVFVVISLIAATLLNSNL---LLPDD
        +F++AWWA++FP++A+A A+I+Y  +V     KIL +++   +   VI+++  T++++ +   L P+D
Subjt:  RFNIAWWAFSFPISALALASIEYHHQVKAFPAKILMLILLIISVFVVISLIAATLLNSNL---LLPDD

AT5G24030.1 SLAC1 homologue 31.0e-0432.79Show/hide
Query:  RFNIAWWAFSFPISALALASIEYHHQVKAFPAKILMLILLIISVFVVISLIAATLLNSNLL
        +F+++WWA++FP++  A+A+I Y   VK+   +I+ ++L  I+  VV +L+  T++++ +L
Subjt:  RFNIAWWAFSFPISALALASIEYHHQVKAFPAKILMLILLIISVFVVISLIAATLLNSNLL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAAGATTCAATATAGCGTGGTGGGCGTTCTCCTTCCCAATCTCTGCGCTTGCTCTTGCCTCCATTGAATATCACCACCAAGTCAAAGCATTCCCAGCCAAAATTTT
AATGCTAATTCTTCTTATCATCTCAGTCTTTGTCGTCATCTCCCTCATCGCCGCTACACTACTCAACTCTAACTTGCTCTTGCCCGACGACGACCCTCTTTTCAATCCTT
CCACTCAACGCAACTCAACTCTCGACGAATCTCACCGTCAAGAATCCTTAACTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAAAGATTCAATATAGCGTGGTGGGCGTTCTCCTTCCCAATCTCTGCGCTTGCTCTTGCCTCCATTGAATATCACCACCAAGTCAAAGCATTCCCAGCCAAAATTTT
AATGCTAATTCTTCTTATCATCTCAGTCTTTGTCGTCATCTCCCTCATCGCCGCTACACTACTCAACTCTAACTTGCTCTTGCCCGACGACGACCCTCTTTTCAATCCTT
CCACTCAACGCAACTCAACTCTCGACGAATCTCACCGTCAAGAATCCTTAACTTAA
Protein sequenceShow/hide protein sequence
MKRFNIAWWAFSFPISALALASIEYHHQVKAFPAKILMLILLIISVFVVISLIAATLLNSNLLLPDDDPLFNPSTQRNSTLDESHRQESLT