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HG10014110 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10014110
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionIntraflagellar transport protein
Genome locationChr02:7643584..7644045
RNA-Seq ExpressionHG10014110
SyntenyHG10014110
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6608487.1 hypothetical protein SDJN03_01829, partial [Cucurbita argyrosperma subsp. sororia]2.3e-6284.31Show/hide
Query:  MPQRDWHKNLKERENMNSGGGIAAWNVFDNVKTTTKTPEALMAEINAAISNFEYARTTAWLESPISLADPEDVGSSASLRTHYDVRMADGAYKAGCAALT
        MPQRDWHKN K +ENM+SGGGIAAWNVFDNVKTTTKTPEAL+AEIN AI+N EYAR+TA+LESPIS   P+D  S AS  T YD R+AD AYKAGCAAL 
Subjt:  MPQRDWHKNLKERENMNSGGGIAAWNVFDNVKTTTKTPEALMAEINAAISNFEYARTTAWLESPISLADPEDVGSSASLRTHYDVRMADGAYKAGCAALT

Query:  VGKLDEALHSLNVSLSKCPPEKSSAVAKLQSLISLTSQQLQIRSSNCHEISED
        VGKLDEALHSLNVSLSKCPPEKSSAVAKLQSLISLTSQQLQIRSSNCHEISED
Subjt:  VGKLDEALHSLNVSLSKCPPEKSSAVAKLQSLISLTSQQLQIRSSNCHEISED

XP_008452533.1 PREDICTED: uncharacterized protein LOC103493531 [Cucumis melo]4.9e-5779.74Show/hide
Query:  MPQRDWHKNLKERENMNSGGGIAAWNVFDNVKTTTKTPEALMAEINAAISNFEYARTTAWLESPISLADPEDVGSSASLRTHYDVRMADGAYKAGCAALT
        M QR+WHK+ + RE++NS GGI  WNVFDNVKTTTKTPEALMAEINAAISN EY RT A+LESPIS   PED   SA+ R+ YDVR+ADGAYKAGC ALT
Subjt:  MPQRDWHKNLKERENMNSGGGIAAWNVFDNVKTTTKTPEALMAEINAAISNFEYARTTAWLESPISLADPEDVGSSASLRTHYDVRMADGAYKAGCAALT

Query:  VGKLDEALHSLNVSLSKCPPEKSSAVAKLQSLISLTSQQLQIRSSNCHEISED
        +GKLDEALHSLNVSLSKCPPEKSSAVAK+QSLISLTSQQ+QIRSSNC EISED
Subjt:  VGKLDEALHSLNVSLSKCPPEKSSAVAKLQSLISLTSQQLQIRSSNCHEISED

XP_011654103.1 uncharacterized protein LOC101212714 [Cucumis sativus]8.1e-6083.01Show/hide
Query:  MPQRDWHKNLKERENMNSGGGIAAWNVFDNVKTTTKTPEALMAEINAAISNFEYARTTAWLESPISLADPEDVGSSASLRTHYDVRMADGAYKAGCAALT
        MPQR+ HK+ +ERE++NS GGIAAWNVFD+VKTTTKTPEALM EI AAISN EYARTTA+LESPIS  +PED   SA+ R+ YDVRMADGAYKAGC ALT
Subjt:  MPQRDWHKNLKERENMNSGGGIAAWNVFDNVKTTTKTPEALMAEINAAISNFEYARTTAWLESPISLADPEDVGSSASLRTHYDVRMADGAYKAGCAALT

Query:  VGKLDEALHSLNVSLSKCPPEKSSAVAKLQSLISLTSQQLQIRSSNCHEISED
        VGKLDEALHSLNVSLSKCPPEKSSAVAK+QSLISLTSQQLQIRSSNC EISED
Subjt:  VGKLDEALHSLNVSLSKCPPEKSSAVAKLQSLISLTSQQLQIRSSNCHEISED

XP_022940904.1 uncharacterized protein LOC111446352 [Cucurbita moschata]1.9e-6183.01Show/hide
Query:  MPQRDWHKNLKERENMNSGGGIAAWNVFDNVKTTTKTPEALMAEINAAISNFEYARTTAWLESPISLADPEDVGSSASLRTHYDVRMADGAYKAGCAALT
        MPQRDWHKN K +ENM+SGGGIAAWNVFDNVKTTTKTPEAL+AEIN AI+N EYAR+TA+LESPIS   P+D  S  S  T YD R+AD AYKAGCAAL 
Subjt:  MPQRDWHKNLKERENMNSGGGIAAWNVFDNVKTTTKTPEALMAEINAAISNFEYARTTAWLESPISLADPEDVGSSASLRTHYDVRMADGAYKAGCAALT

Query:  VGKLDEALHSLNVSLSKCPPEKSSAVAKLQSLISLTSQQLQIRSSNCHEISED
        VGKLDEALHSLNVSLSKCPPEKSSAVAKLQSLISLTS+QLQIRSSNCHEISED
Subjt:  VGKLDEALHSLNVSLSKCPPEKSSAVAKLQSLISLTSQQLQIRSSNCHEISED

XP_038899466.1 uncharacterized protein LOC120086752 [Benincasa hispida]2.9e-6589.54Show/hide
Query:  MPQRDWHKNLKERENMNSGGGIAAWNVFDNVKTTTKTPEALMAEINAAISNFEYARTTAWLESPISLADPEDVGSSASLRTHYDVRMADGAYKAGCAALT
        MPQRDWHKNLKE ENMNSG GIAAWNVFDNVKTTTKTPEALMAEINAAISNFEYARTTA L+SPIS  D ED  SSASLRT Y VRMADG+YKAGCAA T
Subjt:  MPQRDWHKNLKERENMNSGGGIAAWNVFDNVKTTTKTPEALMAEINAAISNFEYARTTAWLESPISLADPEDVGSSASLRTHYDVRMADGAYKAGCAALT

Query:  VGKLDEALHSLNVSLSKCPPEKSSAVAKLQSLISLTSQQLQIRSSNCHEISED
        VGKLDEALHSLNVSLSKCPPEKSSAVAKLQSLISLTS QLQIRSSN  EISED
Subjt:  VGKLDEALHSLNVSLSKCPPEKSSAVAKLQSLISLTSQQLQIRSSNCHEISED

TrEMBL top hitse value%identityAlignment
A0A0A0L090 Uncharacterized protein3.9e-6083.01Show/hide
Query:  MPQRDWHKNLKERENMNSGGGIAAWNVFDNVKTTTKTPEALMAEINAAISNFEYARTTAWLESPISLADPEDVGSSASLRTHYDVRMADGAYKAGCAALT
        MPQR+ HK+ +ERE++NS GGIAAWNVFD+VKTTTKTPEALM EI AAISN EYARTTA+LESPIS  +PED   SA+ R+ YDVRMADGAYKAGC ALT
Subjt:  MPQRDWHKNLKERENMNSGGGIAAWNVFDNVKTTTKTPEALMAEINAAISNFEYARTTAWLESPISLADPEDVGSSASLRTHYDVRMADGAYKAGCAALT

Query:  VGKLDEALHSLNVSLSKCPPEKSSAVAKLQSLISLTSQQLQIRSSNCHEISED
        VGKLDEALHSLNVSLSKCPPEKSSAVAK+QSLISLTSQQLQIRSSNC EISED
Subjt:  VGKLDEALHSLNVSLSKCPPEKSSAVAKLQSLISLTSQQLQIRSSNCHEISED

A0A1S3BU07 uncharacterized protein LOC1034935312.4e-5779.74Show/hide
Query:  MPQRDWHKNLKERENMNSGGGIAAWNVFDNVKTTTKTPEALMAEINAAISNFEYARTTAWLESPISLADPEDVGSSASLRTHYDVRMADGAYKAGCAALT
        M QR+WHK+ + RE++NS GGI  WNVFDNVKTTTKTPEALMAEINAAISN EY RT A+LESPIS   PED   SA+ R+ YDVR+ADGAYKAGC ALT
Subjt:  MPQRDWHKNLKERENMNSGGGIAAWNVFDNVKTTTKTPEALMAEINAAISNFEYARTTAWLESPISLADPEDVGSSASLRTHYDVRMADGAYKAGCAALT

Query:  VGKLDEALHSLNVSLSKCPPEKSSAVAKLQSLISLTSQQLQIRSSNCHEISED
        +GKLDEALHSLNVSLSKCPPEKSSAVAK+QSLISLTSQQ+QIRSSNC EISED
Subjt:  VGKLDEALHSLNVSLSKCPPEKSSAVAKLQSLISLTSQQLQIRSSNCHEISED

A0A5A7VF87 Uncharacterized protein2.4e-5779.74Show/hide
Query:  MPQRDWHKNLKERENMNSGGGIAAWNVFDNVKTTTKTPEALMAEINAAISNFEYARTTAWLESPISLADPEDVGSSASLRTHYDVRMADGAYKAGCAALT
        M QR+WHK+ + RE++NS GGI  WNVFDNVKTTTKTPEALMAEINAAISN EY RT A+LESPIS   PED   SA+ R+ YDVR+ADGAYKAGC ALT
Subjt:  MPQRDWHKNLKERENMNSGGGIAAWNVFDNVKTTTKTPEALMAEINAAISNFEYARTTAWLESPISLADPEDVGSSASLRTHYDVRMADGAYKAGCAALT

Query:  VGKLDEALHSLNVSLSKCPPEKSSAVAKLQSLISLTSQQLQIRSSNCHEISED
        +GKLDEALHSLNVSLSKCPPEKSSAVAK+QSLISLTSQQ+QIRSSNC EISED
Subjt:  VGKLDEALHSLNVSLSKCPPEKSSAVAKLQSLISLTSQQLQIRSSNCHEISED

A0A6J1BP49 uncharacterized protein LOC1110261682.8e-5076.47Show/hide
Query:  MPQRDWHKNLKERENMNSGGGIAAWNVFDNVKTTTKTPEALMAEINAAISNFEYARTTAWLESPISLADPEDVGSSASLRTHYDVRMADGAYKAGCAALT
        MP RD  KN KEREN+ S GGI AWN FDNV  TTKTPEALMAEINAAIS  EYARTTA LES    A  +D GS ASL   YD RMAD AYKAGCAAL 
Subjt:  MPQRDWHKNLKERENMNSGGGIAAWNVFDNVKTTTKTPEALMAEINAAISNFEYARTTAWLESPISLADPEDVGSSASLRTHYDVRMADGAYKAGCAALT

Query:  VGKLDEALHSLNVSLSKCPPEKSSAVAKLQSLISLTSQQLQIRSSNCHEISED
        VGKLD+ALHSLNVSLSKCPPEK+SAVAKL SLI+LTSQQL  RSSNC EISED
Subjt:  VGKLDEALHSLNVSLSKCPPEKSSAVAKLQSLISLTSQQLQIRSSNCHEISED

A0A6J1FLM9 uncharacterized protein LOC1114463529.3e-6283.01Show/hide
Query:  MPQRDWHKNLKERENMNSGGGIAAWNVFDNVKTTTKTPEALMAEINAAISNFEYARTTAWLESPISLADPEDVGSSASLRTHYDVRMADGAYKAGCAALT
        MPQRDWHKN K +ENM+SGGGIAAWNVFDNVKTTTKTPEAL+AEIN AI+N EYAR+TA+LESPIS   P+D  S  S  T YD R+AD AYKAGCAAL 
Subjt:  MPQRDWHKNLKERENMNSGGGIAAWNVFDNVKTTTKTPEALMAEINAAISNFEYARTTAWLESPISLADPEDVGSSASLRTHYDVRMADGAYKAGCAALT

Query:  VGKLDEALHSLNVSLSKCPPEKSSAVAKLQSLISLTSQQLQIRSSNCHEISED
        VGKLDEALHSLNVSLSKCPPEKSSAVAKLQSLISLTS+QLQIRSSNCHEISED
Subjt:  VGKLDEALHSLNVSLSKCPPEKSSAVAKLQSLISLTSQQLQIRSSNCHEISED

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTCAACGAGATTGGCACAAGAATTTGAAAGAAAGGGAGAATATGAATTCTGGAGGAGGAATCGCCGCTTGGAATGTGTTTGACAATGTGAAGACTACAACGAAGAC
TCCTGAAGCTCTAATGGCGGAGATCAATGCAGCAATTTCAAATTTCGAATATGCTCGAACCACGGCTTGGTTAGAATCTCCAATTTCTCTCGCTGATCCAGAGGATGTGG
GATCTAGTGCGAGTTTAAGAACTCATTATGATGTTCGAATGGCGGATGGAGCATACAAGGCAGGTTGTGCAGCATTGACTGTTGGTAAGCTTGATGAGGCTCTTCATTCG
TTGAATGTTTCACTTTCGAAATGCCCGCCTGAGAAGTCCTCTGCTGTTGCTAAGCTTCAGTCTCTCATCTCGCTCACGTCTCAGCAACTCCAAATCAGATCTTCTAATTG
CCATGAAATTTCAGAAGATTGA
mRNA sequenceShow/hide mRNA sequence
ATGCCTCAACGAGATTGGCACAAGAATTTGAAAGAAAGGGAGAATATGAATTCTGGAGGAGGAATCGCCGCTTGGAATGTGTTTGACAATGTGAAGACTACAACGAAGAC
TCCTGAAGCTCTAATGGCGGAGATCAATGCAGCAATTTCAAATTTCGAATATGCTCGAACCACGGCTTGGTTAGAATCTCCAATTTCTCTCGCTGATCCAGAGGATGTGG
GATCTAGTGCGAGTTTAAGAACTCATTATGATGTTCGAATGGCGGATGGAGCATACAAGGCAGGTTGTGCAGCATTGACTGTTGGTAAGCTTGATGAGGCTCTTCATTCG
TTGAATGTTTCACTTTCGAAATGCCCGCCTGAGAAGTCCTCTGCTGTTGCTAAGCTTCAGTCTCTCATCTCGCTCACGTCTCAGCAACTCCAAATCAGATCTTCTAATTG
CCATGAAATTTCAGAAGATTGA
Protein sequenceShow/hide protein sequence
MPQRDWHKNLKERENMNSGGGIAAWNVFDNVKTTTKTPEALMAEINAAISNFEYARTTAWLESPISLADPEDVGSSASLRTHYDVRMADGAYKAGCAALTVGKLDEALHS
LNVSLSKCPPEKSSAVAKLQSLISLTSQQLQIRSSNCHEISED