CuGenDBv2

Gene ID	HG10014114
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Calcium-binding EF-hand
Genome location	Chr02:7677993..7678265
RNA-Seq Expression	HG10014114
Synteny	HG10014114
Gene Ontology terms	GO:0005509 - calcium ion binding (molecular function)
InterPro domains	IPR002048 - EF-hand domain IPR011992 - EF-hand domain pair IPR018247 - EF-Hand 1, calcium-binding site

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0064376.1 putative calcium-binding protein CML27 [Cucumis melo var. makuwa]

1.2e-39

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Query:  MARKSKTYHPRAKLSREQLLIIFKNHDSDKDGRLSTTELTEAFRCIGAFLPPYRARHALFHADSDRDGFIGEKDFELLVNYAEQRKYTII
        M+R+SKTYHPRA+LSREQLL+IF+NHDSDKDGRLSTTELTEAFR IGAFLPPYRARHALFHADSDRDGFI EKDFELLVNYAEQR+YT+I
Subjt:  MARKSKTYHPRAKLSREQLLIIFKNHDSDKDGRLSTTELTEAFRCIGAFLPPYRARHALFHADSDRDGFIGEKDFELLVNYAEQRKYTII

KAG6591370.1 Polcalcin Bet v 4, partial [Cucurbita argyrosperma subsp. sororia]

6.5e-33

82.95

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Query:  MARKSKTYHPRAKLSREQLLIIFKNHDSDKDGRLSTTELTEAFRCIGAFLPPYRARHALFHADSDRDGFIGEKDFELLVNYAEQRKYT
        MARKSKTY PR KLSREQL +IF+NHD D DGRLSTTELT AFR IGAFLP YRA HAL H DSD DGFIGEKDFELLVNYAE+RKYT
Subjt:  MARKSKTYHPRAKLSREQLLIIFKNHDSDKDGRLSTTELTEAFRCIGAFLPPYRARHALFHADSDRDGFIGEKDFELLVNYAEQRKYT

KAG6608481.1 Polcalcin Bet v 4, partial [Cucurbita argyrosperma subsp. sororia]

8.7e-30

75.56

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Query:  MARKSKTYHPRAKLSREQLLIIFKNHDSDKDGRLSTTELTEAFRCIGAFLPPYRARHALFHADSDRDGFIGEKDFELLVNYAEQRKYTII
        MARK+K   PR KLSREQL +IF+NHD D DGRLS TELTEAFR IGAFLP YRA HAL + DSDRDGFIGEKDFE LVNY E+R YTI+
Subjt:  MARKSKTYHPRAKLSREQLLIIFKNHDSDKDGRLSTTELTEAFRCIGAFLPPYRARHALFHADSDRDGFIGEKDFELLVNYAEQRKYTII

KAG7024248.1 Polcalcin Bet v 4, partial [Cucurbita argyrosperma subsp. argyrosperma]

1.3e-33

82.22

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Query:  MARKSKTYHPRAKLSREQLLIIFKNHDSDKDGRLSTTELTEAFRCIGAFLPPYRARHALFHADSDRDGFIGEKDFELLVNYAEQRKYTII
        MARKSKTY PR KLSREQL +IF+NHD D DGRLSTTELT AFR IGAFLP YRA HAL H DSD DGFIGEKDFELLVNYAE+RKYT+I
Subjt:  MARKSKTYHPRAKLSREQLLIIFKNHDSDKDGRLSTTELTEAFRCIGAFLPPYRARHALFHADSDRDGFIGEKDFELLVNYAEQRKYTII

KGN55185.1 hypothetical protein Csa_012915 [Cucumis sativus]

1.5e-37

88.89

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Query:  MARKSKTYHPRAKLSREQLLIIFKNHDSDKDGRLSTTELTEAFRCIGAFLPPYRARHALFHADSDRDGFIGEKDFELLVNYAEQRKYTII
        M+RKSK Y+PRAKLSREQLL+IF+NHDSDKDGRLSTTELTEAFR IGAFLP YRARHAL HADSDRDGFIGEKDFE LVNYAEQR+YTII
Subjt:  MARKSKTYHPRAKLSREQLLIIFKNHDSDKDGRLSTTELTEAFRCIGAFLPPYRARHALFHADSDRDGFIGEKDFELLVNYAEQRKYTII

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KZR6 Uncharacterized protein

7.2e-38

88.89

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Query:  MARKSKTYHPRAKLSREQLLIIFKNHDSDKDGRLSTTELTEAFRCIGAFLPPYRARHALFHADSDRDGFIGEKDFELLVNYAEQRKYTII
        M+RKSK Y+PRAKLSREQLL+IF+NHDSDKDGRLSTTELTEAFR IGAFLP YRARHAL HADSDRDGFIGEKDFE LVNYAEQR+YTII
Subjt:  MARKSKTYHPRAKLSREQLLIIFKNHDSDKDGRLSTTELTEAFRCIGAFLPPYRARHALFHADSDRDGFIGEKDFELLVNYAEQRKYTII

A0A5A7UY46 Putative calcium-binding protein CML10

2.3e-12

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Query:  KLSREQLLIIFKNHDSDKDGRLSTTELTEAFRCIGAFLPPYRARHALFHADSDRDGFIGEKDFELLVNYAEQRKYTII
        KL +E++  IF+ HD + DGRLS  EL+ AF   GAF P YRA   LF AD D DGFI E++ E +V+YA + KY ++
Subjt:  KLSREQLLIIFKNHDSDKDGRLSTTELTEAFRCIGAFLPPYRARHALFHADSDRDGFIGEKDFELLVNYAEQRKYTII

A0A5A7VDB9 Putative calcium-binding protein CML27

5.9e-40

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Query:  MARKSKTYHPRAKLSREQLLIIFKNHDSDKDGRLSTTELTEAFRCIGAFLPPYRARHALFHADSDRDGFIGEKDFELLVNYAEQRKYTII
        M+R+SKTYHPRA+LSREQLL+IF+NHDSDKDGRLSTTELTEAFR IGAFLPPYRARHALFHADSDRDGFI EKDFELLVNYAEQR+YT+I
Subjt:  MARKSKTYHPRAKLSREQLLIIFKNHDSDKDGRLSTTELTEAFRCIGAFLPPYRARHALFHADSDRDGFIGEKDFELLVNYAEQRKYTII

A0A5C7H618 Uncharacterized protein

1.8e-12

45.68

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Query:  HPRAKLSREQLLIIFKNHDSDKDGRLSTTELTEAFRCIGAFLPPYRARHALFHADSDRDGFIGEKDFELLVNYAEQRKYTI
        HP    + +QL  IF+  D+D DGRLS  ELT+AF  +G+  P YRA  AL HAD+++DGF+ E +F+ LV YA +  + +
Subjt:  HPRAKLSREQLLIIFKNHDSDKDGRLSTTELTEAFRCIGAFLPPYRARHALFHADSDRDGFIGEKDFELLVNYAEQRKYTI

W9RZZ8 Putative calcium-binding protein CML27

1.8e-12

49.35

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Query:  RAKLSREQLLIIFKNHDSDKDGRLSTTELTEAFRCIGAFLPPYRARHALFHADSDRDGFIGEKDFELLVNYAEQRKY
        +A  + EQL  +FK HD++KDG LS  ELT+AF  +G+F P +RA  AL H D +RDGF+ E +F  LV Y  Q  Y
Subjt:  RAKLSREQLLIIFKNHDSDKDGRLSTTELTEAFRCIGAFLPPYRARHALFHADSDRDGFIGEKDFELLVNYAEQRKY

SwissProt top hits

e value

%identity

Alignment

O81701 Polcalcin Aln g 4

2.3e-04

34.33

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Query:  HPRAKLSREQLLIIFKNHDSDKDGRLSTTELTEAFRCIGAFLPPYRARHALFHADSDRDGFIGEKDF
        HP+ +   E+   IFK  D++ DG++S +EL +A + +G+ + P   +H +   D+D DGFI  ++F
Subjt:  HPRAKLSREQLLIIFKNHDSDKDGRLSTTELTEAFRCIGAFLPPYRARHALFHADSDRDGFIGEKDF

Q39419 Polcalcin Bet v 4

4.1e-06

38.81

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Query:  HPRAKLSREQLLIIFKNHDSDKDGRLSTTELTEAFRCIGAFLPPYRARHALFHADSDRDGFIGEKDF
        HP+ K  RE+   IFK  D++ DG++S  EL EA + +G+ + P   +H +   D+D DGFI  ++F
Subjt:  HPRAKLSREQLLIIFKNHDSDKDGRLSTTELTEAFRCIGAFLPPYRARHALFHADSDRDGFIGEKDF

Q6L4D4 Probable calcium-binding protein CML15

8.6e-04

31.82

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Query:  PRAKLSREQLLIIFKNHDSDKDGRLSTTELTEAFRCIGAFLPPYRARHALFHADSDRDGFIGEKDF
        PR   + ++   +F+  D++ DGR+S  EL   FR +G  +        +  ADSD DG+I   +F
Subjt:  PRAKLSREQLLIIFKNHDSDKDGRLSTTELTEAFRCIGAFLPPYRARHALFHADSDRDGFIGEKDF

Q8L3R2 Probable calcium-binding protein CML41

7.0e-06

37.7

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Query:  SREQLLIIFKNHDSDKDGRLSTTELTEAFRCIGAFLPPYRARHALFHADSDRDGFIGEKDF
        S+E+L  +F + DSD DG++S  EL   F  +G ++    A+ A+   D+D DG +G +DF
Subjt:  SREQLLIIFKNHDSDKDGRLSTTELTEAFRCIGAFLPPYRARHALFHADSDRDGFIGEKDF

Arabidopsis top hits

e value

%identity

Alignment

AT1G76640.1 Calcium-binding EF-hand family protein

2.3e-04

32.76

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Query:  IFKNHDSDKDGRLSTTELTEAFRCIGAFLPPYRARHALFHADSDRDGFIGEKDFELLV
        +F   D+++DGR+S  EL ++F+ +G  +    A  A+  +D D DG +   +F LL+
Subjt:  IFKNHDSDKDGRLSTTELTEAFRCIGAFLPPYRARHALFHADSDRDGFIGEKDFELLV

AT1G76650.1 calmodulin-like 38

2.3e-04

28.99

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Query:  QLLIIFKNHDSDKDGRLSTTELTEAFRCIGAFLPPYRARHALFHADSDRDGFIGEKDFELLVNYAEQRK
        +L  +F   D+++DGR+S  EL ++F  +G  L    A  A+  +D+D DG +  ++F  L+   ++ +
Subjt:  QLLIIFKNHDSDKDGRLSTTELTEAFRCIGAFLPPYRARHALFHADSDRDGFIGEKDFELLVNYAEQRK

AT1G76650.3 calmodulin-like 38

2.3e-04

28.99

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Query:  QLLIIFKNHDSDKDGRLSTTELTEAFRCIGAFLPPYRARHALFHADSDRDGFIGEKDFELLVNYAEQRK
        +L  +F   D+++DGR+S  EL ++F  +G  L    A  A+  +D+D DG +  ++F  L+   ++ +
Subjt:  QLLIIFKNHDSDKDGRLSTTELTEAFRCIGAFLPPYRARHALFHADSDRDGFIGEKDFELLVNYAEQRK

AT3G50770.1 calmodulin-like 41

5.0e-07

37.7

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Query:  SREQLLIIFKNHDSDKDGRLSTTELTEAFRCIGAFLPPYRARHALFHADSDRDGFIGEKDF
        S+E+L  +F + DSD DG++S  EL   F  +G ++    A+ A+   D+D DG +G +DF
Subjt:  SREQLLIIFKNHDSDKDGRLSTTELTEAFRCIGAFLPPYRARHALFHADSDRDGFIGEKDF

AT3G51920.1 calmodulin 9

1.4e-04

31.75

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Query:  EQLLIIFKNHDSDKDGRLSTTELTEAFRCIGAFLPPYRARHALFHADSDRDGFIGEKDFELLV
        ++L+ +F+  D D DG +S  EL E  + +G  +    A H +  AD D DGF+   +F  ++
Subjt:  EQLLIIFKNHDSDKDGRLSTTELTEAFRCIGAFLPPYRARHALFHADSDRDGFIGEKDFELLV

Sequences

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CDS sequence

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ATGGCGAGGAAAAGCAAAACGTACCATCCAAGGGCGAAGCTATCAAGAGAGCAGTTACTTATAATCTTCAAAAACCACGACAGCGACAAGGACGGCCGCCTCAGCACCAC
CGAACTCACCGAAGCCTTCCGGTGTATCGGCGCCTTTCTGCCGCCGTACAGAGCTCGCCACGCTCTTTTTCATGCCGATTCTGACAGAGACGGATTTATCGGAGAGAAGG
ATTTCGAGTTGCTCGTCAATTATGCCGAGCAACGCAAATACACCATCATTTGA

mRNA sequence

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Protein sequence

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MARKSKTYHPRAKLSREQLLIIFKNHDSDKDGRLSTTELTEAFRCIGAFLPPYRARHALFHADSDRDGFIGEKDFELLVNYAEQRKYTII

HG10014114 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome