; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10014126 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10014126
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionCold regulated protein 27
Genome locationChr02:7802028..7803682
RNA-Seq ExpressionHG10014126
SyntenyHG10014126
Gene Ontology termsGO:0009409 - response to cold (biological process)
GO:0042752 - regulation of circadian rhythm (biological process)
InterPro domainsIPR044678 - Cold-regulated protein 27/28


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022935854.1 uncharacterized protein LOC111442637 isoform X1 [Cucurbita moschata]5.0e-10483.47Show/hide
Query:  MELLPRNLENLKAVETRSDSLVSEFAKDESNEFALPVESSSQGTHMTNSVPSDWTDEKHHLFLESMEASFVSQMFDTAHSVGSCLSKENSSRTKLLGQNQ
        MELLP NLEN  AVETR+DSL+SE AKDES EFALPVESSS GTHMT+SVPSDWTDEKHHLFLESME SFVSQMFD+ HSVGSC  KENSS TKL GQ+Q
Subjt:  MELLPRNLENLKAVETRSDSLVSEFAKDESNEFALPVESSSQGTHMTNSVPSDWTDEKHHLFLESMEASFVSQMFDTAHSVGSCLSKENSSRTKLLGQNQ

Query:  SASHVHSHFGQFKVLRRGSWKNINFEPTESRLNLLNDYQALSHNPWIHHFRAARKNKNVAGKTQAIGSIGRNLLPFGAANNSGPMRACDSDLSQQYISSN
        SASHVHSHFGQFKVLRRGSWKNINFE TESR NLLND+QALS NPWIHHFRA RKNKNVA K+QAIGS GRNL P GAAN+S P+RACDSDLS QYISSN
Subjt:  SASHVHSHFGQFKVLRRGSWKNINFEPTESRLNLLNDYQALSHNPWIHHFRAARKNKNVAGKTQAIGSIGRNLLPFGAANNSGPMRACDSDLSQQYISSN

Query:  KEVSDQNFVDEDREAEKGSSDC-NDKRVKTPETNALINDQVI
        +EVSDQNFVDEDRE   GSSDC N KRV TPETNALIN+Q I
Subjt:  KEVSDQNFVDEDREAEKGSSDC-NDKRVKTPETNALINDQVI

XP_022935855.1 uncharacterized protein LOC111442637 isoform X2 [Cucurbita moschata]8.6e-10483.75Show/hide
Query:  MELLPRNLENLKAVETRSDSLVSEFAKDESNEFALPVESSSQGTHMTNSVPSDWTDEKHHLFLESMEASFVSQMFDTAHSVGSCLSKENSSRTKLLGQNQ
        MELLP NLEN  AVETR+DSL+SE AKDES EFALPVESSS GTHMT+SVPSDWTDEKHHLFLESME SFVSQMFD+ HSVGSC  KENSS TKL GQ+Q
Subjt:  MELLPRNLENLKAVETRSDSLVSEFAKDESNEFALPVESSSQGTHMTNSVPSDWTDEKHHLFLESMEASFVSQMFDTAHSVGSCLSKENSSRTKLLGQNQ

Query:  SASHVHSHFGQFKVLRRGSWKNINFEPTESRLNLLNDYQALSHNPWIHHFRAARKNKNVAGKTQAIGSIGRNLLPFGAANNSGPMRACDSDLSQQYISSN
        SASHVHSHFGQFKVLRRGSWKNINFE TESR NLLND+QALS NPWIHHFRA RKNKNVA K+QAIGS GRNL P GAAN+S P+RACDSDLS QYISSN
Subjt:  SASHVHSHFGQFKVLRRGSWKNINFEPTESRLNLLNDYQALSHNPWIHHFRAARKNKNVAGKTQAIGSIGRNLLPFGAANNSGPMRACDSDLSQQYISSN

Query:  KEVSDQNFVDEDREAEKGSSDC-NDKRVKTPETNALINDQ
        +EVSDQNFVDEDRE   GSSDC N KRV TPETNALIN+Q
Subjt:  KEVSDQNFVDEDREAEKGSSDC-NDKRVKTPETNALINDQ

XP_038896198.1 cold-regulated protein 27 isoform X1 [Benincasa hispida]2.4e-11490.83Show/hide
Query:  MELLPRNLENLKAVETRSDSLVSEFAKDESNEFALPVESSSQGTHMTNSVPSDWTDEKHHLFLESMEASFVSQMFDTAHSVGSCLSKENSSRTKLLGQNQ
        MELLPRNLENLKAVETRSDS+VSEFAKDES EFALPV SSSQGTHMT+SVPSDWTDEKHHLFLESMEASFVSQMFD+ HSVGSC SKENSSR KLLGQ+Q
Subjt:  MELLPRNLENLKAVETRSDSLVSEFAKDESNEFALPVESSSQGTHMTNSVPSDWTDEKHHLFLESMEASFVSQMFDTAHSVGSCLSKENSSRTKLLGQNQ

Query:  SASHVHSHFGQFKVLRRGSWKNINFEPTESRLNLLNDYQALSHNPWIHHFRAARKNKNVAGKTQAIGSIGRNLLPFGAANNSGPMRACDSDLSQQYISSN
        SASHVHSHFGQFKVLRRGSWKNINFEPTESR NLLNDYQALSHNPWIHHFRAARKNKNVA K+Q+IGS GRN LPFGAANNSG MRA DSDLSQQ+ISSN
Subjt:  SASHVHSHFGQFKVLRRGSWKNINFEPTESRLNLLNDYQALSHNPWIHHFRAARKNKNVAGKTQAIGSIGRNLLPFGAANNSGPMRACDSDLSQQYISSN

Query:  KEVSDQNFVDEDREAEKGSSDCNDKRVKTPETNALINDQV
        KEVSDQNFVDE  EAEKGSSDCN KRVKTP+TNALINDQV
Subjt:  KEVSDQNFVDEDREAEKGSSDCNDKRVKTPETNALINDQV

XP_038896199.1 cold-regulated protein 27 isoform X2 [Benincasa hispida]5.4e-11490.08Show/hide
Query:  MELLPRNLENLKAVETRSDSLVSEFAKDESNEFALPVESSSQGTHMTNSVPSDWTDEKHHLFLESMEASFVSQMFDTAHSVGSCLSKENSSRTKLLGQNQ
        MELLPRNLENLKAVETRSDS+VSEFAKDES EFALPV SSSQGTHMT+SVPSDWTDEKHHLFLESMEASFVSQMFD+ HSVGSC SKENSSR KLLGQ+Q
Subjt:  MELLPRNLENLKAVETRSDSLVSEFAKDESNEFALPVESSSQGTHMTNSVPSDWTDEKHHLFLESMEASFVSQMFDTAHSVGSCLSKENSSRTKLLGQNQ

Query:  SASHVHSHFGQFKVLRRGSWKNINFEPTESRLNLLNDYQALSHNPWIHHFRAARKNKNVAGKTQAIGSIGRNLLPFGAANNSGPMRACDSDLSQQYISSN
        SASHVHSHFGQFKVLRRGSWKNINFEPTESR NLLNDYQALSHNPWIHHFRAARKNKNVA K+Q+IGS GRN LPFGAANNSG MRA DSDLSQQ+ISSN
Subjt:  SASHVHSHFGQFKVLRRGSWKNINFEPTESRLNLLNDYQALSHNPWIHHFRAARKNKNVAGKTQAIGSIGRNLLPFGAANNSGPMRACDSDLSQQYISSN

Query:  KEVSDQNFVDEDREAEKGSSDCNDKRVKTPETNALINDQVIE
        KEVSDQNFVDE  EAEKGSSDCN KRVKTP+TNALINDQ  E
Subjt:  KEVSDQNFVDEDREAEKGSSDCNDKRVKTPETNALINDQVIE

XP_038896200.1 cold-regulated protein 27 isoform X3 [Benincasa hispida]7.0e-11490.79Show/hide
Query:  MELLPRNLENLKAVETRSDSLVSEFAKDESNEFALPVESSSQGTHMTNSVPSDWTDEKHHLFLESMEASFVSQMFDTAHSVGSCLSKENSSRTKLLGQNQ
        MELLPRNLENLKAVETRSDS+VSEFAKDES EFALPV SSSQGTHMT+SVPSDWTDEKHHLFLESMEASFVSQMFD+ HSVGSC SKENSSR KLLGQ+Q
Subjt:  MELLPRNLENLKAVETRSDSLVSEFAKDESNEFALPVESSSQGTHMTNSVPSDWTDEKHHLFLESMEASFVSQMFDTAHSVGSCLSKENSSRTKLLGQNQ

Query:  SASHVHSHFGQFKVLRRGSWKNINFEPTESRLNLLNDYQALSHNPWIHHFRAARKNKNVAGKTQAIGSIGRNLLPFGAANNSGPMRACDSDLSQQYISSN
        SASHVHSHFGQFKVLRRGSWKNINFEPTESR NLLNDYQALSHNPWIHHFRAARKNKNVA K+Q+IGS GRN LPFGAANNSG MRA DSDLSQQ+ISSN
Subjt:  SASHVHSHFGQFKVLRRGSWKNINFEPTESRLNLLNDYQALSHNPWIHHFRAARKNKNVAGKTQAIGSIGRNLLPFGAANNSGPMRACDSDLSQQYISSN

Query:  KEVSDQNFVDEDREAEKGSSDCNDKRVKTPETNALINDQ
        KEVSDQNFVDE  EAEKGSSDCN KRVKTP+TNALINDQ
Subjt:  KEVSDQNFVDEDREAEKGSSDCNDKRVKTPETNALINDQ

TrEMBL top hitse value%identityAlignment
A0A0A0L0A2 Polyketide_cyc domain-containing protein4.3e-10180Show/hide
Query:  MELLPRNLENLKAVETRSDSLVSEFAKDESNEFALPVESSSQGTHMTNSVPSDWTDEKHHLFLESMEASFVSQMFDTAHSVGSCLSKENSSRTKLLGQNQ
        MELLP NL++L   ETR+DSLVSEF KD+S EF+ P+ESSS+GTHMT+SVPSDWTDEKHHLFLESMEASFVSQMFD+ HSVGSC +K+NSSRTKLL ++Q
Subjt:  MELLPRNLENLKAVETRSDSLVSEFAKDESNEFALPVESSSQGTHMTNSVPSDWTDEKHHLFLESMEASFVSQMFDTAHSVGSCLSKENSSRTKLLGQNQ

Query:  SASHVHSHFGQFKVLRRGSWKNINFEPTESRLNLLNDYQALSHNPWIHHFRAARKNKNVAGKTQAIGSIGRNLLPFGAANNSGPMRACDSDLSQQYISSN
        SASH HS FGQFKVLRRGSWKNINFEPTESR N LN+YQALSHNPWIHHFRAARKNKNV  K+QAIGS GRN L  GAANNSGP+RA DSDLSQQYIS+N
Subjt:  SASHVHSHFGQFKVLRRGSWKNINFEPTESRLNLLNDYQALSHNPWIHHFRAARKNKNVAGKTQAIGSIGRNLLPFGAANNSGPMRACDSDLSQQYISSN

Query:  KEVSDQNFVDEDREAEKGSSDCNDKRVKTPETNALINDQV
        KEVSDQNFVDE  E EKGS DCN KR    ETNALINDQ+
Subjt:  KEVSDQNFVDEDREAEKGSSDCNDKRVKTPETNALINDQV

A0A6J1F6L8 uncharacterized protein LOC111442637 isoform X12.4e-10483.47Show/hide
Query:  MELLPRNLENLKAVETRSDSLVSEFAKDESNEFALPVESSSQGTHMTNSVPSDWTDEKHHLFLESMEASFVSQMFDTAHSVGSCLSKENSSRTKLLGQNQ
        MELLP NLEN  AVETR+DSL+SE AKDES EFALPVESSS GTHMT+SVPSDWTDEKHHLFLESME SFVSQMFD+ HSVGSC  KENSS TKL GQ+Q
Subjt:  MELLPRNLENLKAVETRSDSLVSEFAKDESNEFALPVESSSQGTHMTNSVPSDWTDEKHHLFLESMEASFVSQMFDTAHSVGSCLSKENSSRTKLLGQNQ

Query:  SASHVHSHFGQFKVLRRGSWKNINFEPTESRLNLLNDYQALSHNPWIHHFRAARKNKNVAGKTQAIGSIGRNLLPFGAANNSGPMRACDSDLSQQYISSN
        SASHVHSHFGQFKVLRRGSWKNINFE TESR NLLND+QALS NPWIHHFRA RKNKNVA K+QAIGS GRNL P GAAN+S P+RACDSDLS QYISSN
Subjt:  SASHVHSHFGQFKVLRRGSWKNINFEPTESRLNLLNDYQALSHNPWIHHFRAARKNKNVAGKTQAIGSIGRNLLPFGAANNSGPMRACDSDLSQQYISSN

Query:  KEVSDQNFVDEDREAEKGSSDC-NDKRVKTPETNALINDQVI
        +EVSDQNFVDEDRE   GSSDC N KRV TPETNALIN+Q I
Subjt:  KEVSDQNFVDEDREAEKGSSDC-NDKRVKTPETNALINDQVI

A0A6J1FBV0 uncharacterized protein LOC111442637 isoform X24.2e-10483.75Show/hide
Query:  MELLPRNLENLKAVETRSDSLVSEFAKDESNEFALPVESSSQGTHMTNSVPSDWTDEKHHLFLESMEASFVSQMFDTAHSVGSCLSKENSSRTKLLGQNQ
        MELLP NLEN  AVETR+DSL+SE AKDES EFALPVESSS GTHMT+SVPSDWTDEKHHLFLESME SFVSQMFD+ HSVGSC  KENSS TKL GQ+Q
Subjt:  MELLPRNLENLKAVETRSDSLVSEFAKDESNEFALPVESSSQGTHMTNSVPSDWTDEKHHLFLESMEASFVSQMFDTAHSVGSCLSKENSSRTKLLGQNQ

Query:  SASHVHSHFGQFKVLRRGSWKNINFEPTESRLNLLNDYQALSHNPWIHHFRAARKNKNVAGKTQAIGSIGRNLLPFGAANNSGPMRACDSDLSQQYISSN
        SASHVHSHFGQFKVLRRGSWKNINFE TESR NLLND+QALS NPWIHHFRA RKNKNVA K+QAIGS GRNL P GAAN+S P+RACDSDLS QYISSN
Subjt:  SASHVHSHFGQFKVLRRGSWKNINFEPTESRLNLLNDYQALSHNPWIHHFRAARKNKNVAGKTQAIGSIGRNLLPFGAANNSGPMRACDSDLSQQYISSN

Query:  KEVSDQNFVDEDREAEKGSSDC-NDKRVKTPETNALINDQ
        +EVSDQNFVDEDRE   GSSDC N KRV TPETNALIN+Q
Subjt:  KEVSDQNFVDEDREAEKGSSDC-NDKRVKTPETNALINDQ

A0A6J1IFL9 uncharacterized protein LOC111476815 isoform X13.5e-10382.16Show/hide
Query:  MELLPRNLENLKAVETRSDSLVSEFAKDESNEFALPVESSSQGTHMTNSVPSDWTDEKHHLFLESMEASFVSQMFDTAHSVGSCLSKENSSRTKLLGQNQ
        MELLP NLEN  AVETR+D L+SE  KD+S EFALPVESSS GTHMT+SVPSDWTDEKHHLFLESME SFVSQMFD+ HSVGSC  KENSS TKL GQ+Q
Subjt:  MELLPRNLENLKAVETRSDSLVSEFAKDESNEFALPVESSSQGTHMTNSVPSDWTDEKHHLFLESMEASFVSQMFDTAHSVGSCLSKENSSRTKLLGQNQ

Query:  SASHVHSHFGQFKVLRRGSWKNINFEPTESRLNLLNDYQALSHNPWIHHFRAARKNKNVAGKTQAIGSIGRNLLPFGAANNSGPMRACDSDLSQQYISSN
        SASHVH+HFGQFKVLRRGSWKNINFE TESR NLLND+QALS NPWIHHFRA RKNKNVA K+QAIGS GRNL P GAANNS P+RAC SDLS QYISSN
Subjt:  SASHVHSHFGQFKVLRRGSWKNINFEPTESRLNLLNDYQALSHNPWIHHFRAARKNKNVAGKTQAIGSIGRNLLPFGAANNSGPMRACDSDLSQQYISSN

Query:  KEVSDQNFVDEDREAEKGSSDCNDKRVKTPETNALINDQVI
        +EVSDQNFVDEDRE   GSSDCN KRV TPETNALIN+Q I
Subjt:  KEVSDQNFVDEDREAEKGSSDCNDKRVKTPETNALINDQVI

A0A6J1IM11 uncharacterized protein LOC111476815 isoform X26.0e-10382.43Show/hide
Query:  MELLPRNLENLKAVETRSDSLVSEFAKDESNEFALPVESSSQGTHMTNSVPSDWTDEKHHLFLESMEASFVSQMFDTAHSVGSCLSKENSSRTKLLGQNQ
        MELLP NLEN  AVETR+D L+SE  KD+S EFALPVESSS GTHMT+SVPSDWTDEKHHLFLESME SFVSQMFD+ HSVGSC  KENSS TKL GQ+Q
Subjt:  MELLPRNLENLKAVETRSDSLVSEFAKDESNEFALPVESSSQGTHMTNSVPSDWTDEKHHLFLESMEASFVSQMFDTAHSVGSCLSKENSSRTKLLGQNQ

Query:  SASHVHSHFGQFKVLRRGSWKNINFEPTESRLNLLNDYQALSHNPWIHHFRAARKNKNVAGKTQAIGSIGRNLLPFGAANNSGPMRACDSDLSQQYISSN
        SASHVH+HFGQFKVLRRGSWKNINFE TESR NLLND+QALS NPWIHHFRA RKNKNVA K+QAIGS GRNL P GAANNS P+RAC SDLS QYISSN
Subjt:  SASHVHSHFGQFKVLRRGSWKNINFEPTESRLNLLNDYQALSHNPWIHHFRAARKNKNVAGKTQAIGSIGRNLLPFGAANNSGPMRACDSDLSQQYISSN

Query:  KEVSDQNFVDEDREAEKGSSDCNDKRVKTPETNALINDQ
        +EVSDQNFVDEDRE   GSSDCN KRV TPETNALIN+Q
Subjt:  KEVSDQNFVDEDREAEKGSSDCNDKRVKTPETNALINDQ

SwissProt top hitse value%identityAlignment
Q8L8T7 Cold-regulated protein 276.6e-1432.86Show/hide
Query:  DESNEFALPVE---SSSQGTHMTNSVPSDWTDEKHHLFLESMEASFVSQMFDTAHSVGSCLSKENSSRTKLLGQNQSASHVHSHFGQFKVLRRGSWKNIN
        D+S++ A  VE   +SS  +     + ++WT+EKH L+L+SMEASFV Q++   +S+G+    EN S +   G  +  S       QFKVL  G W+ IN
Subjt:  DESNEFALPVE---SSSQGTHMTNSVPSDWTDEKHHLFLESMEASFVSQMFDTAHSVGSCLSKENSSRTKLLGQNQSASHVHSHFGQFKVLRRGSWKNIN

Query:  FEPTESRLNLL---NDYQALSHNPWIHHFRAARKNK---NVAGKTQAIGSIG--RNLLPFGAANNSGPMRACDSDLSQQYISSNKEVSDQNFVDEDREAE
         +  E R+N     N ++ L  +PWI H++   K +       + Q + S    + +   G+A++   + +   D  Q  +    EVSDQNFV+E  + E
Subjt:  FEPTESRLNLL---NDYQALSHNPWIHHFRAARKNK---NVAGKTQAIGSIG--RNLLPFGAANNSGPMRACDSDLSQQYISSNKEVSDQNFVDEDREAE

Query:  KGSSDCNDKRVKT
         GSS    K++KT
Subjt:  KGSSDCNDKRVKT

Q8L983 Cold-regulated protein 283.0e-0624.79Show/hide
Query:  VETRSDSLVSEFAKDESNEFALPVESSSQGTHMTNSVPSD--------WTDEKHHLFLESMEASFVSQMFDTAHSVGSCLSKENSSRTKLLGQNQSASHV
        V    D  VSE + +  +E  L     S  T  T+   +D        WT+EKH+ +L+ +E+SFV Q++            +  SRT+ +  N      
Subjt:  VETRSDSLVSEFAKDESNEFALPVESSSQGTHMTNSVPSD--------WTDEKHHLFLESMEASFVSQMFDTAHSVGSCLSKENSSRTKLLGQNQSASHV

Query:  HSHFGQFKVLRRGSWKNINFEPTESRLNLLNDYQALSHNPWIHHFRAARKNKNVAGKTQAIGSIGRNLLPFGAANNSGPMRACDSDLSQQYISSNKEVSD
        H    QF VL+ G W+ +NF   +S L   ++++        H      K +N  G      ++  ++L             C  +      + + E S 
Subjt:  HSHFGQFKVLRRGSWKNINFEPTESRLNLLNDYQALSHNPWIHHFRAARKNKNVAGKTQAIGSIGRNLLPFGAANNSGPMRACDSDLSQQYISSNKEVSD

Query:  QNFVDEDREAEKGSSDCNDKRVKTPETNALINDQVIEV
        QNF +E+ E EKG      +R    + ++L  DQV+ V
Subjt:  QNFVDEDREAEKGSSDCNDKRVKTPETNALINDQVIEV

Arabidopsis top hitse value%identityAlignment
AT4G33980.1 BEST Arabidopsis thaliana protein match is: cold regulated gene 27 (TAIR:AT5G42900.2)2.1e-0724.79Show/hide
Query:  VETRSDSLVSEFAKDESNEFALPVESSSQGTHMTNSVPSD--------WTDEKHHLFLESMEASFVSQMFDTAHSVGSCLSKENSSRTKLLGQNQSASHV
        V    D  VSE + +  +E  L     S  T  T+   +D        WT+EKH+ +L+ +E+SFV Q++            +  SRT+ +  N      
Subjt:  VETRSDSLVSEFAKDESNEFALPVESSSQGTHMTNSVPSD--------WTDEKHHLFLESMEASFVSQMFDTAHSVGSCLSKENSSRTKLLGQNQSASHV

Query:  HSHFGQFKVLRRGSWKNINFEPTESRLNLLNDYQALSHNPWIHHFRAARKNKNVAGKTQAIGSIGRNLLPFGAANNSGPMRACDSDLSQQYISSNKEVSD
        H    QF VL+ G W+ +NF   +S L   ++++        H      K +N  G      ++  ++L             C  +      + + E S 
Subjt:  HSHFGQFKVLRRGSWKNINFEPTESRLNLLNDYQALSHNPWIHHFRAARKNKNVAGKTQAIGSIGRNLLPFGAANNSGPMRACDSDLSQQYISSNKEVSD

Query:  QNFVDEDREAEKGSSDCNDKRVKTPETNALINDQVIEV
        QNF +E+ E EKG      +R    + ++L  DQV+ V
Subjt:  QNFVDEDREAEKGSSDCNDKRVKTPETNALINDQVIEV

AT4G33980.2 FUNCTIONS IN: molecular_function unknown2.1e-0724.79Show/hide
Query:  VETRSDSLVSEFAKDESNEFALPVESSSQGTHMTNSVPSD--------WTDEKHHLFLESMEASFVSQMFDTAHSVGSCLSKENSSRTKLLGQNQSASHV
        V    D  VSE + +  +E  L     S  T  T+   +D        WT+EKH+ +L+ +E+SFV Q++            +  SRT+ +  N      
Subjt:  VETRSDSLVSEFAKDESNEFALPVESSSQGTHMTNSVPSD--------WTDEKHHLFLESMEASFVSQMFDTAHSVGSCLSKENSSRTKLLGQNQSASHV

Query:  HSHFGQFKVLRRGSWKNINFEPTESRLNLLNDYQALSHNPWIHHFRAARKNKNVAGKTQAIGSIGRNLLPFGAANNSGPMRACDSDLSQQYISSNKEVSD
        H    QF VL+ G W+ +NF   +S L   ++++        H      K +N  G      ++  ++L             C  +      + + E S 
Subjt:  HSHFGQFKVLRRGSWKNINFEPTESRLNLLNDYQALSHNPWIHHFRAARKNKNVAGKTQAIGSIGRNLLPFGAANNSGPMRACDSDLSQQYISSNKEVSD

Query:  QNFVDEDREAEKGSSDCNDKRVKTPETNALINDQVIEV
        QNF +E+ E EKG      +R    + ++L  DQV+ V
Subjt:  QNFVDEDREAEKGSSDCNDKRVKTPETNALINDQVIEV

AT5G42900.1 cold regulated gene 274.7e-1532.86Show/hide
Query:  DESNEFALPVE---SSSQGTHMTNSVPSDWTDEKHHLFLESMEASFVSQMFDTAHSVGSCLSKENSSRTKLLGQNQSASHVHSHFGQFKVLRRGSWKNIN
        D+S++ A  VE   +SS  +     + ++WT+EKH L+L+SMEASFV Q++   +S+G+    EN S +   G  +  S       QFKVL  G W+ IN
Subjt:  DESNEFALPVE---SSSQGTHMTNSVPSDWTDEKHHLFLESMEASFVSQMFDTAHSVGSCLSKENSSRTKLLGQNQSASHVHSHFGQFKVLRRGSWKNIN

Query:  FEPTESRLNLL---NDYQALSHNPWIHHFRAARKNK---NVAGKTQAIGSIG--RNLLPFGAANNSGPMRACDSDLSQQYISSNKEVSDQNFVDEDREAE
         +  E R+N     N ++ L  +PWI H++   K +       + Q + S    + +   G+A++   + +   D  Q  +    EVSDQNFV+E  + E
Subjt:  FEPTESRLNLL---NDYQALSHNPWIHHFRAARKNK---NVAGKTQAIGSIG--RNLLPFGAANNSGPMRACDSDLSQQYISSNKEVSDQNFVDEDREAE

Query:  KGSSDCNDKRVKT
         GSS    K++KT
Subjt:  KGSSDCNDKRVKT

AT5G42900.2 cold regulated gene 274.7e-1532.86Show/hide
Query:  DESNEFALPVE---SSSQGTHMTNSVPSDWTDEKHHLFLESMEASFVSQMFDTAHSVGSCLSKENSSRTKLLGQNQSASHVHSHFGQFKVLRRGSWKNIN
        D+S++ A  VE   +SS  +     + ++WT+EKH L+L+SMEASFV Q++   +S+G+    EN S +   G  +  S       QFKVL  G W+ IN
Subjt:  DESNEFALPVE---SSSQGTHMTNSVPSDWTDEKHHLFLESMEASFVSQMFDTAHSVGSCLSKENSSRTKLLGQNQSASHVHSHFGQFKVLRRGSWKNIN

Query:  FEPTESRLNLL---NDYQALSHNPWIHHFRAARKNK---NVAGKTQAIGSIG--RNLLPFGAANNSGPMRACDSDLSQQYISSNKEVSDQNFVDEDREAE
         +  E R+N     N ++ L  +PWI H++   K +       + Q + S    + +   G+A++   + +   D  Q  +    EVSDQNFV+E  + E
Subjt:  FEPTESRLNLL---NDYQALSHNPWIHHFRAARKNK---NVAGKTQAIGSIG--RNLLPFGAANNSGPMRACDSDLSQQYISSNKEVSDQNFVDEDREAE

Query:  KGSSDCNDKRVKT
         GSS    K++KT
Subjt:  KGSSDCNDKRVKT

AT5G42900.3 cold regulated gene 275.5e-1633.8Show/hide
Query:  DESNEFALPVE---SSSQGTHMTNSVPSDWTDEKHHLFLESMEASFVSQMFDTAHSVGSCLSKENSSRTKLLGQNQSASHVHSHFGQFKVLRRGSWKNIN
        D+S++ A  VE   +SS  +     + ++WT+EKH L+L+SMEASFV Q++   +S+G+    EN S +   G  +  S       QFKVL  G W+ IN
Subjt:  DESNEFALPVE---SSSQGTHMTNSVPSDWTDEKHHLFLESMEASFVSQMFDTAHSVGSCLSKENSSRTKLLGQNQSASHVHSHFGQFKVLRRGSWKNIN

Query:  FEPTESRLNLL---NDYQALSHNPWIHHFRAARKNK---NVAGKTQAIGSIG--RNLLPFGAANNSGPMRACDSDLSQQYISSNKEVSDQNFVDEDREAE
         +  E R+N     N ++ L  +PWI H++   K +       + Q + S    + +   G+A++   + +   D  Q  IS  +EVSDQNFV+E  + E
Subjt:  FEPTESRLNLL---NDYQALSHNPWIHHFRAARKNK---NVAGKTQAIGSIG--RNLLPFGAANNSGPMRACDSDLSQQYISSNKEVSDQNFVDEDREAE

Query:  KGSSDCNDKRVKT
         GSS    K++KT
Subjt:  KGSSDCNDKRVKT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGTTGTTACCTCGAAATTTGGAGAATCTCAAGGCCGTAGAAACTCGGTCTGACTCACTCGTCTCTGAATTCGCCAAGGACGAGTCTAACGAGTTTGCCCTCCCGGT
GGAATCTTCTAGCCAGGGCACTCATATGACGAATTCTGTACCTTCTGATTGGACCGATGAGAAGCACCATTTGTTTCTTGAATCCATGGAGGCATCGTTTGTTAGCCAAA
TGTTTGATACTGCGCATTCAGTTGGTTCTTGCCTCAGCAAGGAAAATTCTTCACGCACAAAATTGCTCGGCCAAAACCAATCCGCCTCTCATGTCCATTCACATTTTGGC
CAGTTTAAAGTTCTTCGACGAGGCAGCTGGAAGAACATTAATTTTGAACCAACTGAATCTCGGTTGAATTTGTTGAATGATTATCAAGCTCTCTCGCATAATCCTTGGAT
ACATCACTTTAGAGCTGCTCGTAAAAACAAAAATGTTGCGGGCAAAACTCAAGCTATCGGTTCAATAGGAAGGAATTTGTTGCCATTCGGAGCAGCTAATAATTCAGGAC
CTATGCGTGCTTGTGATTCTGATTTGTCCCAACAATATATCAGCAGCAATAAAGAAGTGTCAGATCAAAACTTTGTTGACGAAGATAGAGAAGCTGAAAAAGGAAGCAGC
GATTGCAATGACAAAAGGGTTAAAACTCCAGAAACCAATGCTTTGATCAATGACCAGGTAATTGAAGTGATATCAACTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGTTGTTACCTCGAAATTTGGAGAATCTCAAGGCCGTAGAAACTCGGTCTGACTCACTCGTCTCTGAATTCGCCAAGGACGAGTCTAACGAGTTTGCCCTCCCGGT
GGAATCTTCTAGCCAGGGCACTCATATGACGAATTCTGTACCTTCTGATTGGACCGATGAGAAGCACCATTTGTTTCTTGAATCCATGGAGGCATCGTTTGTTAGCCAAA
TGTTTGATACTGCGCATTCAGTTGGTTCTTGCCTCAGCAAGGAAAATTCTTCACGCACAAAATTGCTCGGCCAAAACCAATCCGCCTCTCATGTCCATTCACATTTTGGC
CAGTTTAAAGTTCTTCGACGAGGCAGCTGGAAGAACATTAATTTTGAACCAACTGAATCTCGGTTGAATTTGTTGAATGATTATCAAGCTCTCTCGCATAATCCTTGGAT
ACATCACTTTAGAGCTGCTCGTAAAAACAAAAATGTTGCGGGCAAAACTCAAGCTATCGGTTCAATAGGAAGGAATTTGTTGCCATTCGGAGCAGCTAATAATTCAGGAC
CTATGCGTGCTTGTGATTCTGATTTGTCCCAACAATATATCAGCAGCAATAAAGAAGTGTCAGATCAAAACTTTGTTGACGAAGATAGAGAAGCTGAAAAAGGAAGCAGC
GATTGCAATGACAAAAGGGTTAAAACTCCAGAAACCAATGCTTTGATCAATGACCAGGTAATTGAAGTGATATCAACTTAA
Protein sequenceShow/hide protein sequence
MELLPRNLENLKAVETRSDSLVSEFAKDESNEFALPVESSSQGTHMTNSVPSDWTDEKHHLFLESMEASFVSQMFDTAHSVGSCLSKENSSRTKLLGQNQSASHVHSHFG
QFKVLRRGSWKNINFEPTESRLNLLNDYQALSHNPWIHHFRAARKNKNVAGKTQAIGSIGRNLLPFGAANNSGPMRACDSDLSQQYISSNKEVSDQNFVDEDREAEKGSS
DCNDKRVKTPETNALINDQVIEVIST