CuGenDBv2

Gene ID	HG10014202
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	30S ribosomal protein S7, chloroplastic
Genome location	Chr02:8416192..8416575
RNA-Seq Expression	HG10014202
Synteny	HG10014202
Gene Ontology terms	GO:0006412 - translation (biological process) GO:0005739 - mitochondrion (cellular component) GO:0009507 - chloroplast (cellular component) GO:0015935 - small ribosomal subunit (cellular component) GO:0003735 - structural constituent of ribosome (molecular function) GO:0019843 - rRNA binding (molecular function)
InterPro domains	IPR000235 - Ribosomal protein S5/S7 IPR005717 - Ribosomal protein S7, bacterial/organellar-type IPR023798 - Ribosomal protein S7 domain IPR036823 - Ribosomal protein S7 domain superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_038876080.1 30S ribosomal protein S7, chloroplastic-like [Benincasa hispida]

4.2e-54

90.55

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Query:  MLVNRILKHGKKNHWLITMKKMKQKTETNPRDVLRQAIRGVTPDIAVKARRVGGSTHQVPIKIGSTQGKALAIRWLLGASRKRPGRNMAFKFCSELVDAV
        MLVN ILKHG KNHWLIT+KK++QKTETNPRDVL QAIRGVTPDIAVKAR VGGSTHQVPI IGSTQGKA AIRWLLGASRKRPGRNMAFKF SELVDA 
Subjt:  MLVNRILKHGKKNHWLITMKKMKQKTETNPRDVLRQAIRGVTPDIAVKARRVGGSTHQVPIKIGSTQGKALAIRWLLGASRKRPGRNMAFKFCSELVDAV

Query:  KGSGDAIRKKEETHRMAEANRAFAHFR
        KGSGDAIRKKEETHRMAEANRAFA+FR
Subjt:  KGSGDAIRKKEETHRMAEANRAFAHFR

YP_009004087.1 ribosomal protein S7 [Cucumis hystrix]

2.3e-52

87.79

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Query:  MLVNRILKHGKKN--HWLI--TMKKMKQKTETNPRDVLRQAIRGVTPDIAVKARRVGGSTHQVPIKIGSTQGKALAIRWLLGASRKRPGRNMAFKFCSEL
        MLVNRILKHGKK+  + +I   MKK++QKTETNP  VLRQAIRGVTPDIAVKARRVGGSTHQVPI+IGSTQGKALAIRWLLGASRKRPGRNMAFKF SEL
Subjt:  MLVNRILKHGKKN--HWLI--TMKKMKQKTETNPRDVLRQAIRGVTPDIAVKARRVGGSTHQVPIKIGSTQGKALAIRWLLGASRKRPGRNMAFKFCSEL

Query:  VDAVKGSGDAIRKKEETHRMAEANRAFAHFR
        VDA KGSGDAIRKKEETHRMAEANRAFAHFR
Subjt:  VDAVKGSGDAIRKKEETHRMAEANRAFAHFR

YP_009318927.1 ribosomal protein S7 [Eriocnema fulva]

2.3e-52

87.79

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Query:  MLVNRILKHGKKN--HWLI--TMKKMKQKTETNPRDVLRQAIRGVTPDIAVKARRVGGSTHQVPIKIGSTQGKALAIRWLLGASRKRPGRNMAFKFCSEL
        MLVNRILKHGKK+  + +I   MKK++QKTETNP  VLRQAIRGVTPDIAVKARRVGGSTHQVPI+IGSTQGKALAIRWLLGASRKRPGRNMAFKF SEL
Subjt:  MLVNRILKHGKKN--HWLI--TMKKMKQKTETNPRDVLRQAIRGVTPDIAVKARRVGGSTHQVPIKIGSTQGKALAIRWLLGASRKRPGRNMAFKFCSEL

Query:  VDAVKGSGDAIRKKEETHRMAEANRAFAHFR
        VDA KGSGDAIRKKEETHRMAEANRAFAHFR
Subjt:  VDAVKGSGDAIRKKEETHRMAEANRAFAHFR

YP_009556545.1 ribosomal protein S7 [Rhabdodendron amazonicum]

5.2e-52

87.02

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Query:  MLVNRILKHGKKN--HWLI--TMKKMKQKTETNPRDVLRQAIRGVTPDIAVKARRVGGSTHQVPIKIGSTQGKALAIRWLLGASRKRPGRNMAFKFCSEL
        MLVNRILKHGKK+  + +I   +KK++QKTETNP  VLRQAIRGVTPDIAVKARRVGGSTHQVPI+IGSTQGKALAIRWLLGASRKRPGRNMAFKF SEL
Subjt:  MLVNRILKHGKKN--HWLI--TMKKMKQKTETNPRDVLRQAIRGVTPDIAVKARRVGGSTHQVPIKIGSTQGKALAIRWLLGASRKRPGRNMAFKFCSEL

Query:  VDAVKGSGDAIRKKEETHRMAEANRAFAHFR
        VDA KGSGDAIRKKEETHRMAEANRAFAHFR
Subjt:  VDAVKGSGDAIRKKEETHRMAEANRAFAHFR

YP_009767874.1 ribosomal protein S7 [Dermatophyllum secundiflorum]

3.9e-52

87.02

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Query:  MLVNRILKHGKKN--HWLI--TMKKMKQKTETNPRDVLRQAIRGVTPDIAVKARRVGGSTHQVPIKIGSTQGKALAIRWLLGASRKRPGRNMAFKFCSEL
        MLVNRILKHGKK+  + ++   MKK++QKTETNP  VLRQAIRGVTPDIAVKARRVGGSTHQVPI+IGSTQGKALAIRWLLGASRKRPGRNMAFKF SEL
Subjt:  MLVNRILKHGKKN--HWLI--TMKKMKQKTETNPRDVLRQAIRGVTPDIAVKARRVGGSTHQVPIKIGSTQGKALAIRWLLGASRKRPGRNMAFKFCSEL

Query:  VDAVKGSGDAIRKKEETHRMAEANRAFAHFR
        VDA KGSGDAIRKKEETHRMAEANRAFAHFR
Subjt:  VDAVKGSGDAIRKKEETHRMAEANRAFAHFR

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L6M3 30S ribosomal protein S7, chloroplastic

1.1e-52

87.79

Show/hide

Query:  MLVNRILKHGKKN--HWLI--TMKKMKQKTETNPRDVLRQAIRGVTPDIAVKARRVGGSTHQVPIKIGSTQGKALAIRWLLGASRKRPGRNMAFKFCSEL
        MLVNRILKHGKK+  + +I   MKK++QKTETNP  VLRQAIRGVTPDIAVKARRVGGSTHQVPI+IGSTQGKALAIRWLLGASRKRPGRNMAFKF SEL
Subjt:  MLVNRILKHGKKN--HWLI--TMKKMKQKTETNPRDVLRQAIRGVTPDIAVKARRVGGSTHQVPIKIGSTQGKALAIRWLLGASRKRPGRNMAFKFCSEL

Query:  VDAVKGSGDAIRKKEETHRMAEANRAFAHFR
        VDA KGSGDAIRKKEETHRMAEANRAFAHFR
Subjt:  VDAVKGSGDAIRKKEETHRMAEANRAFAHFR

A0A1I9VUZ4 30S ribosomal protein S7, chloroplastic

1.1e-52

87.79

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Query:  MLVNRILKHGKKN--HWLI--TMKKMKQKTETNPRDVLRQAIRGVTPDIAVKARRVGGSTHQVPIKIGSTQGKALAIRWLLGASRKRPGRNMAFKFCSEL
        MLVNRILKHGKK+  + +I   MKK++QKTETNP  VLRQAIRGVTPDIAVKARRVGGSTHQVPI+IGSTQGKALAIRWLLGASRKRPGRNMAFKF SEL
Subjt:  MLVNRILKHGKKN--HWLI--TMKKMKQKTETNPRDVLRQAIRGVTPDIAVKARRVGGSTHQVPIKIGSTQGKALAIRWLLGASRKRPGRNMAFKFCSEL

Query:  VDAVKGSGDAIRKKEETHRMAEANRAFAHFR
        VDA KGSGDAIRKKEETHRMAEANRAFAHFR
Subjt:  VDAVKGSGDAIRKKEETHRMAEANRAFAHFR

A0A218KG96 30S ribosomal protein S7, chloroplastic

1.1e-52

87.79

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Query:  MLVNRILKHGKKN--HWLI--TMKKMKQKTETNPRDVLRQAIRGVTPDIAVKARRVGGSTHQVPIKIGSTQGKALAIRWLLGASRKRPGRNMAFKFCSEL
        MLVNRILKHGKK+  + +I   MKK++QKTETNP  VLRQAIRGVTPDIAVKARRVGGSTHQVPI+IGSTQGKALAIRWLLGASRKRPGRNMAFKF SEL
Subjt:  MLVNRILKHGKKN--HWLI--TMKKMKQKTETNPRDVLRQAIRGVTPDIAVKARRVGGSTHQVPIKIGSTQGKALAIRWLLGASRKRPGRNMAFKFCSEL

Query:  VDAVKGSGDAIRKKEETHRMAEANRAFAHFR
        VDA KGSGDAIRKKEETHRMAEANRAFAHFR
Subjt:  VDAVKGSGDAIRKKEETHRMAEANRAFAHFR

A0A343UM92 30S ribosomal protein S7, chloroplastic

1.1e-52

87.79

Show/hide

Query:  MLVNRILKHGKKN--HWLI--TMKKMKQKTETNPRDVLRQAIRGVTPDIAVKARRVGGSTHQVPIKIGSTQGKALAIRWLLGASRKRPGRNMAFKFCSEL
        MLVNRILKHGKK+  + +I   MKK++QKTETNP  VLRQAIRGVTPDIAVKARRVGGSTHQVPI+IGSTQGKALAIRWLLGASRKRPGRNMAFKF SEL
Subjt:  MLVNRILKHGKKN--HWLI--TMKKMKQKTETNPRDVLRQAIRGVTPDIAVKARRVGGSTHQVPIKIGSTQGKALAIRWLLGASRKRPGRNMAFKFCSEL

Query:  VDAVKGSGDAIRKKEETHRMAEANRAFAHFR
        VDA KGSGDAIRKKEETHRMAEANRAFAHFR
Subjt:  VDAVKGSGDAIRKKEETHRMAEANRAFAHFR

A0A6H0E3D0 Ribosomal protein S7

1.1e-52

87.79

Show/hide

Query:  MLVNRILKHGKKN--HWLI--TMKKMKQKTETNPRDVLRQAIRGVTPDIAVKARRVGGSTHQVPIKIGSTQGKALAIRWLLGASRKRPGRNMAFKFCSEL
        MLVNRILKHGKK+  + +I   MKK++QKTETNP  VLRQAIRGVTPDIAVKARRVGGSTHQVPI+IGSTQGKALAIRWLLGASRKRPGRNMAFKF SEL
Subjt:  MLVNRILKHGKKN--HWLI--TMKKMKQKTETNPRDVLRQAIRGVTPDIAVKARRVGGSTHQVPIKIGSTQGKALAIRWLLGASRKRPGRNMAFKFCSEL

Query:  VDAVKGSGDAIRKKEETHRMAEANRAFAHFR
        VDA KGSGDAIRKKEETHRMAEANRAFAHFR
Subjt:  VDAVKGSGDAIRKKEETHRMAEANRAFAHFR

SwissProt top hits

e value

%identity

Alignment

A6MMQ4 30S ribosomal protein S7, chloroplastic

1.2e-54

87.02

Show/hide

Query:  MLVNRILKHGKKN--HWLI--TMKKMKQKTETNPRDVLRQAIRGVTPDIAVKARRVGGSTHQVPIKIGSTQGKALAIRWLLGASRKRPGRNMAFKFCSEL
        MLVNRILKHGKK+  + +I  T+KK++QKTETNP  VLRQAIRGVTPDIAVKARRVGGSTHQVPI+IGSTQGKALAIRWLLGASRKRPGRNMAFK  SEL
Subjt:  MLVNRILKHGKKN--HWLI--TMKKMKQKTETNPRDVLRQAIRGVTPDIAVKARRVGGSTHQVPIKIGSTQGKALAIRWLLGASRKRPGRNMAFKFCSEL

Query:  VDAVKGSGDAIRKKEETHRMAEANRAFAHFR
        VDA KGSGDAIRKKEETHRMAEANRAFAHFR
Subjt:  VDAVKGSGDAIRKKEETHRMAEANRAFAHFR

Q49KT8 30S ribosomal protein S7, chloroplastic

1.5e-54

87.02

Show/hide

Query:  MLVNRILKHGKKN--HWLI--TMKKMKQKTETNPRDVLRQAIRGVTPDIAVKARRVGGSTHQVPIKIGSTQGKALAIRWLLGASRKRPGRNMAFKFCSEL
        MLVNRILKHGKK+  + +I   MKK++QKTETNP  VLRQAIRGVTPDIAVKARRVGGSTHQVPI+IGSTQGKALAIRWLLGASRKRPGRNMAFK  SEL
Subjt:  MLVNRILKHGKKN--HWLI--TMKKMKQKTETNPRDVLRQAIRGVTPDIAVKARRVGGSTHQVPIKIGSTQGKALAIRWLLGASRKRPGRNMAFKFCSEL

Query:  VDAVKGSGDAIRKKEETHRMAEANRAFAHFR
        VDA KGSGDAIRKKEETHRMAEANRAFAHFR
Subjt:  VDAVKGSGDAIRKKEETHRMAEANRAFAHFR

Q4VZK9 30S ribosomal protein S7, chloroplastic

3.0e-55

87.79

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Query:  MLVNRILKHGKKN--HWLI--TMKKMKQKTETNPRDVLRQAIRGVTPDIAVKARRVGGSTHQVPIKIGSTQGKALAIRWLLGASRKRPGRNMAFKFCSEL
        MLVNRILKHGKK+  + +I   MKK++QKTETNP  VLRQAIRGVTPDIAVKARRVGGSTHQVPI+IGSTQGKALAIRWLLGASRKRPGRNMAFKF SEL
Subjt:  MLVNRILKHGKKN--HWLI--TMKKMKQKTETNPRDVLRQAIRGVTPDIAVKARRVGGSTHQVPIKIGSTQGKALAIRWLLGASRKRPGRNMAFKFCSEL

Query:  VDAVKGSGDAIRKKEETHRMAEANRAFAHFR
        VDA KGSGDAIRKKEETHRMAEANRAFAHFR
Subjt:  VDAVKGSGDAIRKKEETHRMAEANRAFAHFR

Q67ID1 30S ribosomal protein S7, chloroplastic

1.5e-54

87.02

Show/hide

Query:  MLVNRILKHGKKN--HWLI--TMKKMKQKTETNPRDVLRQAIRGVTPDIAVKARRVGGSTHQVPIKIGSTQGKALAIRWLLGASRKRPGRNMAFKFCSEL
        MLVNRILKHGKK+  + +I   +KKM+QKTETNP  VLRQAIRGVTPDIAVKARRVGGSTHQVPI+IGSTQGKALAIRWLLGASRKRPGRNMAFK  SEL
Subjt:  MLVNRILKHGKKN--HWLI--TMKKMKQKTETNPRDVLRQAIRGVTPDIAVKARRVGGSTHQVPIKIGSTQGKALAIRWLLGASRKRPGRNMAFKFCSEL

Query:  VDAVKGSGDAIRKKEETHRMAEANRAFAHFR
        VDA KGSGDAIRKKEETHRMAEANRAFAHFR
Subjt:  VDAVKGSGDAIRKKEETHRMAEANRAFAHFR

Q9GFL8 30S ribosomal protein S7, chloroplastic

1.2e-54

87.02

Show/hide

Query:  MLVNRILKHGKKN--HWLI--TMKKMKQKTETNPRDVLRQAIRGVTPDIAVKARRVGGSTHQVPIKIGSTQGKALAIRWLLGASRKRPGRNMAFKFCSEL
        MLVNRILKHGKK+  + +I  T+KK++QKTETNP  VLRQAIRGVTPDIAVKARRVGGSTHQVPI+IGSTQGKALAIRWLLGASRKRPGRNMAFK  SEL
Subjt:  MLVNRILKHGKKN--HWLI--TMKKMKQKTETNPRDVLRQAIRGVTPDIAVKARRVGGSTHQVPIKIGSTQGKALAIRWLLGASRKRPGRNMAFKFCSEL

Query:  VDAVKGSGDAIRKKEETHRMAEANRAFAHFR
        VDA KGSGDAIRKKEETHRMAEANRAFAHFR
Subjt:  VDAVKGSGDAIRKKEETHRMAEANRAFAHFR

Arabidopsis top hits

e value

%identity

Alignment

AT2G07696.1 Ribosomal protein S7p/S5e family protein

1.0e-10

32.58

Show/hide

Query:  LVNRILKHGKKNHWLITMKKMKQKTETNPRDVLR---QAIRGVTPDIAVKARRVGGSTHQVPIKIGSTQGKALAIRWLLGAS-RKRPGRNMAFKFCS--E
        LVN  +K GK+      + +   +     RDV++    A+  + P   V    V G+ + VP  +   + + LAIRW+L A+ ++R    ++ + CS  E
Subjt:  LVNRILKHGKKNHWLITMKKMKQKTETNPRDVLR---QAIRGVTPDIAVKARRVGGSTHQVPIKIGSTQGKALAIRWLLGAS-RKRPGRNMAFKFCS--E

Query:  LVDAVKGSGDAIRKKEETHRMAEANRAFAHFR
        ++DA +  G A RK+E  H +A  NR+FAHFR
Subjt:  LVDAVKGSGDAIRKKEETHRMAEANRAFAHFR

ATCG00900.1 Ribosomal protein S7p/S5e family protein

2.4e-55

86.26

Show/hide

Query:  MLVNRILKHGKKN--HWLI--TMKKMKQKTETNPRDVLRQAIRGVTPDIAVKARRVGGSTHQVPIKIGSTQGKALAIRWLLGASRKRPGRNMAFKFCSEL
        MLVNRILKHGKK+  + +I   +KK++QKTETNP  VLRQAIRGVTPDIAVKARRVGGSTHQVPI+IGSTQGKALAIRWLLGASRKRPGRNMAFK  SEL
Subjt:  MLVNRILKHGKKN--HWLI--TMKKMKQKTETNPRDVLRQAIRGVTPDIAVKARRVGGSTHQVPIKIGSTQGKALAIRWLLGASRKRPGRNMAFKFCSEL

Query:  VDAVKGSGDAIRKKEETHRMAEANRAFAHFR
        VDA KGSGDAIRKKEETHRMAEANRAFAHFR
Subjt:  VDAVKGSGDAIRKKEETHRMAEANRAFAHFR

ATCG01240.1 ribosomal protein S7

2.4e-55

86.26

Show/hide

Query:  MLVNRILKHGKKN--HWLI--TMKKMKQKTETNPRDVLRQAIRGVTPDIAVKARRVGGSTHQVPIKIGSTQGKALAIRWLLGASRKRPGRNMAFKFCSEL
        MLVNRILKHGKK+  + +I   +KK++QKTETNP  VLRQAIRGVTPDIAVKARRVGGSTHQVPI+IGSTQGKALAIRWLLGASRKRPGRNMAFK  SEL
Subjt:  MLVNRILKHGKKN--HWLI--TMKKMKQKTETNPRDVLRQAIRGVTPDIAVKARRVGGSTHQVPIKIGSTQGKALAIRWLLGASRKRPGRNMAFKFCSEL

Query:  VDAVKGSGDAIRKKEETHRMAEANRAFAHFR
        VDA KGSGDAIRKKEETHRMAEANRAFAHFR
Subjt:  VDAVKGSGDAIRKKEETHRMAEANRAFAHFR

ATMG01270.1 mitochondrial ribosomal protein S7

1.0e-10

32.58

Show/hide

Query:  LVNRILKHGKKNHWLITMKKMKQKTETNPRDVLR---QAIRGVTPDIAVKARRVGGSTHQVPIKIGSTQGKALAIRWLLGAS-RKRPGRNMAFKFCS--E
        LVN  +K GK+      + +   +     RDV++    A+  + P   V    V G+ + VP  +   + + LAIRW+L A+ ++R    ++ + CS  E
Subjt:  LVNRILKHGKKNHWLITMKKMKQKTETNPRDVLR---QAIRGVTPDIAVKARRVGGSTHQVPIKIGSTQGKALAIRWLLGAS-RKRPGRNMAFKFCS--E

Query:  LVDAVKGSGDAIRKKEETHRMAEANRAFAHFR
        ++DA +  G A RK+E  H +A  NR+FAHFR
Subjt:  LVDAVKGSGDAIRKKEETHRMAEANRAFAHFR

Sequences

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CDS sequence

Show/hide CDS sequence

ATGTTGGTTAACCGTATTCTGAAACACGGAAAAAAAAATCATTGGCTTATCACCATGAAAAAGATGAAACAAAAGACAGAAACAAATCCACGAGATGTTTTACGTCAAGC
AATACGTGGAGTAACTCCCGATATAGCAGTAAAGGCAAGACGTGTAGGCGGATCAACTCATCAAGTTCCCATTAAAATAGGATCCACACAAGGAAAAGCACTTGCCATTC
GTTGGTTATTAGGGGCATCCCGAAAACGTCCGGGTCGAAATATGGCTTTCAAATTCTGTTCCGAATTAGTGGATGCTGTCAAAGGGAGTGGCGATGCCATACGTAAAAAG
GAAGAGACTCATAGAATGGCAGAGGCAAATAGAGCTTTTGCACATTTTCGTTAA

mRNA sequence

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Protein sequence

Show/hide protein sequence

MLVNRILKHGKKNHWLITMKKMKQKTETNPRDVLRQAIRGVTPDIAVKARRVGGSTHQVPIKIGSTQGKALAIRWLLGASRKRPGRNMAFKFCSELVDAVKGSGDAIRKK
EETHRMAEANRAFAHFR

HG10014202 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome