CuGenDBv2

Gene ID	HG10014241
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	BRISC and BRCA1-A complex member 1
Genome location	Chr02:8824680..8825362
RNA-Seq Expression	HG10014241
Synteny	HG10014241
Gene Ontology terms	GO:0045739 - positive regulation of DNA repair (biological process) GO:0016021 - integral component of membrane (cellular component) GO:0070531 - BRCA1-A complex (cellular component) GO:0070552 - BRISC complex (cellular component)
InterPro domains	IPR026126 - BRISC and BRCA1-A complex member 1

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0064487.1 BRISC and BRCA1-A complex member 1 [Cucumis melo var. makuwa]

4.6e-88

96.53

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Query:  MKLKKEFSSDIASAEAAVRGL-ATSPCNHADLTSLFRLAAHEARKSTAQNRILRVILIYCRSSTRPQHQWPANQKLFTLDVIYLHEKPGPDNCPQEVYDA
        MKLKKEFSSDIASAEAAVRGL ATSPCNHADLTSLFRLAAHE+RKSTAQNRILR+ILIYCRSSTRPQHQWPANQKLFT DVIYLHEKPGPDNCPQEVYDA
Subjt:  MKLKKEFSSDIASAEAAVRGL-ATSPCNHADLTSLFRLAAHEARKSTAQNRILRVILIYCRSSTRPQHQWPANQKLFTLDVIYLHEKPGPDNCPQEVYDA

Query:  LVDALDLVSQYEGYIFESGQGVARVLYRCMCLLLSHPQQRISLDDLDIPKPLTKKLPPADSTPANEVVPVTSQ
        LVDALD VSQYEGYIFESGQGVARVLYRCMCLLLSHPQQRISLDDLDIPKPLTKKLPPADSTP NEVVPVTSQ
Subjt:  LVDALDLVSQYEGYIFESGQGVARVLYRCMCLLLSHPQQRISLDDLDIPKPLTKKLPPADSTPANEVVPVTSQ

XP_004141308.1 BRISC and BRCA1-A complex member 1 [Cucumis sativus]

1.6e-85

94.74

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Query:  LKKEFSSDIASAEAAVRGL-ATSPCNHADLTSLFRLAAHEARKSTAQNRILRVILIYCRSSTRPQHQWPANQKLFTLDVIYLHEKPGPDNCPQEVYDALV
        LKKEFSSDIASAEAAVRGL ATSPCNHADLTSLFRLAAHE+RKSTAQNRILR+ILIYCRSST+PQHQWPANQKLFT DVIYLHEKPGPDNCPQEVYDALV
Subjt:  LKKEFSSDIASAEAAVRGL-ATSPCNHADLTSLFRLAAHEARKSTAQNRILRVILIYCRSSTRPQHQWPANQKLFTLDVIYLHEKPGPDNCPQEVYDALV

Query:  DALDLVSQYEGYIFESGQGVARVLYRCMCLLLSHPQQRISLDDLDIPKPLTKKLPPADSTPANEVVPVTSQ
        DALD VSQYEGYIFESGQGVARVLYRCMCLLLSHPQQRISLDDLDIPKPLTKKLPPAD+ P NEVVPVTSQ
Subjt:  DALDLVSQYEGYIFESGQGVARVLYRCMCLLLSHPQQRISLDDLDIPKPLTKKLPPADSTPANEVVPVTSQ

XP_008452703.1 PREDICTED: BRISC and BRCA1-A complex member 1 [Cucumis melo]

6.7e-87

96.49

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Query:  LKKEFSSDIASAEAAVRGL-ATSPCNHADLTSLFRLAAHEARKSTAQNRILRVILIYCRSSTRPQHQWPANQKLFTLDVIYLHEKPGPDNCPQEVYDALV
        LKKEFSSDIASAEAAVRGL ATSPCNHADLTSLFRLAAHE+RKSTAQNRILR+ILIYCRSSTRPQHQWPANQKLFT DVIYLHEKPGPDNCPQEVYDALV
Subjt:  LKKEFSSDIASAEAAVRGL-ATSPCNHADLTSLFRLAAHEARKSTAQNRILRVILIYCRSSTRPQHQWPANQKLFTLDVIYLHEKPGPDNCPQEVYDALV

Query:  DALDLVSQYEGYIFESGQGVARVLYRCMCLLLSHPQQRISLDDLDIPKPLTKKLPPADSTPANEVVPVTSQ
        DALD VSQYEGYIFESGQGVARVLYRCMCLLLSHPQQRISLDDLDIPKPLTKKLPPADSTP NEVVPVTSQ
Subjt:  DALDLVSQYEGYIFESGQGVARVLYRCMCLLLSHPQQRISLDDLDIPKPLTKKLPPADSTPANEVVPVTSQ

XP_022142347.1 uncharacterized protein LOC111012487 [Momordica charantia]

5.9e-83

92.4

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Query:  LKKEFSSDIASAEAAVRGL-ATSPCNHADLTSLFRLAAHEARKSTAQNRILRVILIYCRSSTRPQHQWPANQKLFTLDVIYLHEKPGPDNCPQEVYDALV
        LKKEFSSDI S EAAVRGL ATS C+HADLTSLFRLAAHEA+KSTAQNRILR+ILIYCRSSTRPQHQWP NQKLFTLDVIYLHEKPGPDNCPQEVYDALV
Subjt:  LKKEFSSDIASAEAAVRGL-ATSPCNHADLTSLFRLAAHEARKSTAQNRILRVILIYCRSSTRPQHQWPANQKLFTLDVIYLHEKPGPDNCPQEVYDALV

Query:  DALDLVSQYEGYIFESGQGVARVLYRCMCLLLSHPQQRISLDDLDIPKPLTKKLPPADSTPANEVVPVTSQ
        DALD VSQYEGYIFESGQGVARVLYRCMCLLLSHP+QRISLDDLDIPKPLTKKLPP DS P NEVVPVTSQ
Subjt:  DALDLVSQYEGYIFESGQGVARVLYRCMCLLLSHPQQRISLDDLDIPKPLTKKLPPADSTPANEVVPVTSQ

XP_038897935.1 BRISC and BRCA1-A complex member 1 [Benincasa hispida]

5.3e-84

92.4

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Query:  LKKEFSSDIASAEAAVRGL-ATSPCNHADLTSLFRLAAHEARKSTAQNRILRVILIYCRSSTRPQHQWPANQKLFTLDVIYLHEKPGPDNCPQEVYDALV
        LKKEFSSDIA+AEAAVRGL AT+PC+HADLTSLFR+AAHEARKSTAQNRILRVILIYCRSSTRPQHQWP NQK+FT DVIYLHEKPGPDNCPQEVYDALV
Subjt:  LKKEFSSDIASAEAAVRGL-ATSPCNHADLTSLFRLAAHEARKSTAQNRILRVILIYCRSSTRPQHQWPANQKLFTLDVIYLHEKPGPDNCPQEVYDALV

Query:  DALDLVSQYEGYIFESGQGVARVLYRCMCLLLSHPQQRISLDDLDIPKPLTKKLPPADSTPANEVVPVTSQ
        DALD VSQYEGYIFESGQG+AR+LYRCMCLLLSHPQQRISLDDLDIPKPLTKKLPPADS PA EVVPVTSQ
Subjt:  DALDLVSQYEGYIFESGQGVARVLYRCMCLLLSHPQQRISLDDLDIPKPLTKKLPPADSTPANEVVPVTSQ

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L024 BRISC and BRCA1-A complex member 1

8.0e-86

94.74

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Query:  LKKEFSSDIASAEAAVRGL-ATSPCNHADLTSLFRLAAHEARKSTAQNRILRVILIYCRSSTRPQHQWPANQKLFTLDVIYLHEKPGPDNCPQEVYDALV
        LKKEFSSDIASAEAAVRGL ATSPCNHADLTSLFRLAAHE+RKSTAQNRILR+ILIYCRSST+PQHQWPANQKLFT DVIYLHEKPGPDNCPQEVYDALV
Subjt:  LKKEFSSDIASAEAAVRGL-ATSPCNHADLTSLFRLAAHEARKSTAQNRILRVILIYCRSSTRPQHQWPANQKLFTLDVIYLHEKPGPDNCPQEVYDALV

Query:  DALDLVSQYEGYIFESGQGVARVLYRCMCLLLSHPQQRISLDDLDIPKPLTKKLPPADSTPANEVVPVTSQ
        DALD VSQYEGYIFESGQGVARVLYRCMCLLLSHPQQRISLDDLDIPKPLTKKLPPAD+ P NEVVPVTSQ
Subjt:  DALDLVSQYEGYIFESGQGVARVLYRCMCLLLSHPQQRISLDDLDIPKPLTKKLPPADSTPANEVVPVTSQ

A0A1S3BUH3 BRISC and BRCA1-A complex member 1

3.2e-87

96.49

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Query:  LKKEFSSDIASAEAAVRGL-ATSPCNHADLTSLFRLAAHEARKSTAQNRILRVILIYCRSSTRPQHQWPANQKLFTLDVIYLHEKPGPDNCPQEVYDALV
        LKKEFSSDIASAEAAVRGL ATSPCNHADLTSLFRLAAHE+RKSTAQNRILR+ILIYCRSSTRPQHQWPANQKLFT DVIYLHEKPGPDNCPQEVYDALV
Subjt:  LKKEFSSDIASAEAAVRGL-ATSPCNHADLTSLFRLAAHEARKSTAQNRILRVILIYCRSSTRPQHQWPANQKLFTLDVIYLHEKPGPDNCPQEVYDALV

Query:  DALDLVSQYEGYIFESGQGVARVLYRCMCLLLSHPQQRISLDDLDIPKPLTKKLPPADSTPANEVVPVTSQ
        DALD VSQYEGYIFESGQGVARVLYRCMCLLLSHPQQRISLDDLDIPKPLTKKLPPADSTP NEVVPVTSQ
Subjt:  DALDLVSQYEGYIFESGQGVARVLYRCMCLLLSHPQQRISLDDLDIPKPLTKKLPPADSTPANEVVPVTSQ

A0A5A7VBZ3 BRISC and BRCA1-A complex member 1

2.2e-88

96.53

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Query:  MKLKKEFSSDIASAEAAVRGL-ATSPCNHADLTSLFRLAAHEARKSTAQNRILRVILIYCRSSTRPQHQWPANQKLFTLDVIYLHEKPGPDNCPQEVYDA
        MKLKKEFSSDIASAEAAVRGL ATSPCNHADLTSLFRLAAHE+RKSTAQNRILR+ILIYCRSSTRPQHQWPANQKLFT DVIYLHEKPGPDNCPQEVYDA
Subjt:  MKLKKEFSSDIASAEAAVRGL-ATSPCNHADLTSLFRLAAHEARKSTAQNRILRVILIYCRSSTRPQHQWPANQKLFTLDVIYLHEKPGPDNCPQEVYDA

Query:  LVDALDLVSQYEGYIFESGQGVARVLYRCMCLLLSHPQQRISLDDLDIPKPLTKKLPPADSTPANEVVPVTSQ
        LVDALD VSQYEGYIFESGQGVARVLYRCMCLLLSHPQQRISLDDLDIPKPLTKKLPPADSTP NEVVPVTSQ
Subjt:  LVDALDLVSQYEGYIFESGQGVARVLYRCMCLLLSHPQQRISLDDLDIPKPLTKKLPPADSTPANEVVPVTSQ

A0A6J1CMH8 BRISC and BRCA1-A complex member 1

2.8e-83

92.4

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Query:  LKKEFSSDIASAEAAVRGL-ATSPCNHADLTSLFRLAAHEARKSTAQNRILRVILIYCRSSTRPQHQWPANQKLFTLDVIYLHEKPGPDNCPQEVYDALV
        LKKEFSSDI S EAAVRGL ATS C+HADLTSLFRLAAHEA+KSTAQNRILR+ILIYCRSSTRPQHQWP NQKLFTLDVIYLHEKPGPDNCPQEVYDALV
Subjt:  LKKEFSSDIASAEAAVRGL-ATSPCNHADLTSLFRLAAHEARKSTAQNRILRVILIYCRSSTRPQHQWPANQKLFTLDVIYLHEKPGPDNCPQEVYDALV

Query:  DALDLVSQYEGYIFESGQGVARVLYRCMCLLLSHPQQRISLDDLDIPKPLTKKLPPADSTPANEVVPVTSQ
        DALD VSQYEGYIFESGQGVARVLYRCMCLLLSHP+QRISLDDLDIPKPLTKKLPP DS P NEVVPVTSQ
Subjt:  DALDLVSQYEGYIFESGQGVARVLYRCMCLLLSHPQQRISLDDLDIPKPLTKKLPPADSTPANEVVPVTSQ

A0A6J1FN80 BRISC and BRCA1-A complex member 1

4.8e-83

92.4

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Query:  LKKEFSSDIASAEAAVRGLA-TSPCNHADLTSLFRLAAHEARKSTAQNRILRVILIYCRSSTRPQHQWPANQKLFTLDVIYLHEKPGPDNCPQEVYDALV
        LKK+FSSDIAS EAA+RGL  TS C+HADLTSLFRLAAHEARKSTAQN ILRVILIYCRSSTRPQHQWP NQKLFTLDVIYLHEKPGPDNCPQEVYDALV
Subjt:  LKKEFSSDIASAEAAVRGLA-TSPCNHADLTSLFRLAAHEARKSTAQNRILRVILIYCRSSTRPQHQWPANQKLFTLDVIYLHEKPGPDNCPQEVYDALV

Query:  DALDLVSQYEGYIFESGQGVARVLYRCMCLLLSHPQQRISLDDLDIPKPLTKKLPPADSTPANEVVPVTSQ
        DALDLVSQYEGYIFESGQGVARVLYRCMCLLLSHPQQRISLDDL+IPK LTKK+PPADS PANEVVPVTSQ
Subjt:  DALDLVSQYEGYIFESGQGVARVLYRCMCLLLSHPQQRISLDDLDIPKPLTKKLPPADSTPANEVVPVTSQ

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT4G32960.1 unknown protein

2.2e-56

65.43

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Query:  LKKEFSSDIASAEAAVRGLA-TSPCNHADLTSLFRLAAHEARKSTAQNRILRVILIYCRSSTRPQHQWPANQKLFTLDVIYLHEKPGPDNCPQEVYDALV
        LKKEF+SD  SA A++RGL+     + ADLT LFR AA EA+ S AQNRI RVILIYCRSS RP H+WP NQKLFTLDV+YLH+KP PDNCPQ+VYD+LV
Subjt:  LKKEFSSDIASAEAAVRGLA-TSPCNHADLTSLFRLAAHEARKSTAQNRILRVILIYCRSSTRPQHQWPANQKLFTLDVIYLHEKPGPDNCPQEVYDALV

Query:  DALDLVSQYEGYIFESGQGVARVLYRCMCLLLSHPQQRISLDDLDIPKPLTKKLPPADSTPA
        DA++ VS+YEGYIFESGQG+AR +++ M +LL+HPQQR + DDLDIP  L KK+P  ++  A
Subjt:  DALDLVSQYEGYIFESGQGVARVLYRCMCLLLSHPQQRISLDDLDIPKPLTKKLPPADSTPA

AT4G32970.1 unknown protein

2.5e-47

61.44

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Query:  LKKEFSSDIASAEAAVRGL-ATSPCNHADLTSLFRLAAHEARKSTAQNRILRVILIYCRSSTRPQHQWPANQKLFTLDVIYLHEKPGPDNCPQEVYDALV
        LKKEFS+D  SA A++R + AT     ADLT LF+ AA EA+ S AQNRILRVIL+YCRSS RP H WP NQKLFTLDV+YLH+K GPDNC  +VYD+LV
Subjt:  LKKEFSSDIASAEAAVRGL-ATSPCNHADLTSLFRLAAHEARKSTAQNRILRVILIYCRSSTRPQHQWPANQKLFTLDVIYLHEKPGPDNCPQEVYDALV

Query:  DALDLVSQYEGYIFESGQGVARVLYRCMCLLLSHPQQRISLDDLDIPKPLTKK
        DA++ VS+YEGYIFE   G+++ ++R M  LLSHP QR +   +D+PKP  KK
Subjt:  DALDLVSQYEGYIFESGQGVARVLYRCMCLLLSHPQQRISLDDLDIPKPLTKK

Sequences

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CDS sequence

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ATGAAGCTAAAAAAAGAGTTTAGCAGTGATATTGCATCTGCGGAGGCTGCAGTCAGGGGACTTGCTACTTCCCCTTGCAATCATGCTGATCTTACCAGTCTTTTCCGATT
AGCTGCTCATGAAGCAAGAAAGTCAACTGCCCAGAATCGTATTCTAAGAGTGATTCTTATTTATTGCAGATCGTCGACACGACCCCAACATCAATGGCCTGCGAACCAAA
AACTCTTCACTTTAGATGTTATATACCTCCATGAGAAGCCCGGACCTGACAACTGCCCACAGGAGGTGTATGATGCCTTAGTTGATGCCCTTGATCTTGTCAGCCAGTAC
GAAGGCTACATTTTCGAGAGTGGCCAGGGAGTGGCACGTGTTCTTTACCGTTGCATGTGTCTGTTGTTATCACACCCGCAGCAGCGAATATCACTAGATGATCTTGACAT
ACCCAAGCCTCTTACAAAGAAATTGCCTCCTGCTGATTCCACCCCTGCAAACGAGGTTGTCCCTGTTACCAGCCAGTGA

mRNA sequence

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Protein sequence

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MKLKKEFSSDIASAEAAVRGLATSPCNHADLTSLFRLAAHEARKSTAQNRILRVILIYCRSSTRPQHQWPANQKLFTLDVIYLHEKPGPDNCPQEVYDALVDALDLVSQY
EGYIFESGQGVARVLYRCMCLLLSHPQQRISLDDLDIPKPLTKKLPPADSTPANEVVPVTSQ

HG10014241 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome