; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10014348 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10014348
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionRING-type domain-containing protein
Genome locationChr02:9781681..9782154
RNA-Seq ExpressionHG10014348
SyntenyHG10014348
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064334.1 RING-H2 finger protein ATL39-like [Cucumis melo var. makuwa]4.5e-7489.94Show/hide
Query:  MADPLLTLLFPMETMVPESPSPPVVHYTVTLDLRTSIIFSFSIILFFLFLFHVLSGFLQWFLDVRRSGGGAGDMEAGMAEERRLRRPEK--LPPTVRFGS
        M DPLLTLLFPMETMVPES SPPV+HYTVTLDLRTSIIFSFSIILFFLFLFHVLSGFLQWFLDVRRSGGG  D+EA MAEERR++R EK  LPPTV+FGS
Subjt:  MADPLLTLLFPMETMVPESPSPPVVHYTVTLDLRTSIIFSFSIILFFLFLFHVLSGFLQWFLDVRRSGGGAGDMEAGMAEERRLRRPEK--LPPTVRFGS

Query:  EKMVRRRSEEECAICLEEFLAGENCQALPECNHFFHSDCIDVWFSKKFTCPICRNCVAA
        EKMVRRRSEEECAICLEEFLAGENCQALPEC+HFFHS+CI+VWFSKKFTCPICRNCVAA
Subjt:  EKMVRRRSEEECAICLEEFLAGENCQALPECNHFFHSDCIDVWFSKKFTCPICRNCVAA

XP_008453063.1 PREDICTED: RING-H2 finger protein ATL39-like [Cucumis melo]4.5e-7489.94Show/hide
Query:  MADPLLTLLFPMETMVPESPSPPVVHYTVTLDLRTSIIFSFSIILFFLFLFHVLSGFLQWFLDVRRSGGGAGDMEAGMAEERRLRRPEK--LPPTVRFGS
        M DPLLTLLFPMETMVPES SPPV+HYTVTLDLRTSIIFSFSIILFFLFLFHVLSGFLQWFLDVRRSGGG  D+EA MAEERR++R EK  LPPTV+FGS
Subjt:  MADPLLTLLFPMETMVPESPSPPVVHYTVTLDLRTSIIFSFSIILFFLFLFHVLSGFLQWFLDVRRSGGGAGDMEAGMAEERRLRRPEK--LPPTVRFGS

Query:  EKMVRRRSEEECAICLEEFLAGENCQALPECNHFFHSDCIDVWFSKKFTCPICRNCVAA
        EKMVRRRSEEECAICLEEFLAGENCQALPEC+HFFHS+CI+VWFSKKFTCPICRNCVAA
Subjt:  EKMVRRRSEEECAICLEEFLAGENCQALPECNHFFHSDCIDVWFSKKFTCPICRNCVAA

XP_022936829.1 RING-H2 finger protein ATL39-like [Cucurbita moschata]5.4e-6784.18Show/hide
Query:  MADPLLTLLFPMETMVPESPSPP-VVHYTVTLDLRTSIIFSFSIILFFLFLFHVLSGFLQWFLDVRRSGGGAGDMEAGMAEERRLRRPEKLPPTVRFGSE
        MADPLLTLLFPMETMV ES SPP VVHYTVTLDLRTS+IFS +IILFFLFL+HVLSGFLQWFL  RR     GD+EAGM EERR+RR EK+P  VRFGSE
Subjt:  MADPLLTLLFPMETMVPESPSPP-VVHYTVTLDLRTSIIFSFSIILFFLFLFHVLSGFLQWFLDVRRSGGGAGDMEAGMAEERRLRRPEKLPPTVRFGSE

Query:  KMVRRRSEEECAICLEEFLAGENCQALPECNHFFHSDCIDVWFSKKFTCPICRNCVAA
        +MVRRRSEEECAICLEEF+AGENCQALPECNHFFHSDCIDVWFSKKFTCPICR+C+AA
Subjt:  KMVRRRSEEECAICLEEFLAGENCQALPECNHFFHSDCIDVWFSKKFTCPICRNCVAA

XP_022976597.1 RING-H2 finger protein ATL39-like [Cucurbita maxima]2.4e-6784.81Show/hide
Query:  MADPLLTLLFPMETMVPESPSPPV-VHYTVTLDLRTSIIFSFSIILFFLFLFHVLSGFLQWFLDVRRSGGGAGDMEAGMAEERRLRRPEKLPPTVRFGSE
        MADPLLTLLFPMETMV ES SPPV VHYTVTLDLRTSIIFS +IILFFLFL+HVLSGFLQWFL  RR     GD+EAGM EERR+RR EK+P  VRFGSE
Subjt:  MADPLLTLLFPMETMVPESPSPPV-VHYTVTLDLRTSIIFSFSIILFFLFLFHVLSGFLQWFLDVRRSGGGAGDMEAGMAEERRLRRPEKLPPTVRFGSE

Query:  KMVRRRSEEECAICLEEFLAGENCQALPECNHFFHSDCIDVWFSKKFTCPICRNCVAA
        +MVRRRSEEECAICLEEF+AGENCQALPECNHFFHSDCIDVWFSKKFTCPICR+C+AA
Subjt:  KMVRRRSEEECAICLEEFLAGENCQALPECNHFFHSDCIDVWFSKKFTCPICRNCVAA

XP_031740449.1 RING-H2 finger protein ATL39-like [Cucumis sativus]1.1e-7591.19Show/hide
Query:  MADPLLTLLFPMETMVPESPSPPVVHYTVTLDLRTSIIFSFSIILFFLFLFHVLSGFLQWFLDVRRSGGGAGDMEAGMAEERRLRRPEK--LPPTVRFGS
        M DPLLTLLFPMETMVPESPSPPV+HYTVTLD+RTSIIFSFSIILFFLFLFHVLSGFLQWFLDVRR+GGG  D+EA MAEERRL+R EK  LPPTVRFGS
Subjt:  MADPLLTLLFPMETMVPESPSPPVVHYTVTLDLRTSIIFSFSIILFFLFLFHVLSGFLQWFLDVRRSGGGAGDMEAGMAEERRLRRPEK--LPPTVRFGS

Query:  EKMVRRRSEEECAICLEEFLAGENCQALPECNHFFHSDCIDVWFSKKFTCPICRNCVAA
        EKMVRRRSEEECAICLEEFL GENCQALPECNHFFHS+CIDVWFSKKFTCPICRNCVAA
Subjt:  EKMVRRRSEEECAICLEEFLAGENCQALPECNHFFHSDCIDVWFSKKFTCPICRNCVAA

TrEMBL top hitse value%identityAlignment
A0A0A0L062 RING-type domain-containing protein5.2e-7691.19Show/hide
Query:  MADPLLTLLFPMETMVPESPSPPVVHYTVTLDLRTSIIFSFSIILFFLFLFHVLSGFLQWFLDVRRSGGGAGDMEAGMAEERRLRRPEK--LPPTVRFGS
        M DPLLTLLFPMETMVPESPSPPV+HYTVTLD+RTSIIFSFSIILFFLFLFHVLSGFLQWFLDVRR+GGG  D+EA MAEERRL+R EK  LPPTVRFGS
Subjt:  MADPLLTLLFPMETMVPESPSPPVVHYTVTLDLRTSIIFSFSIILFFLFLFHVLSGFLQWFLDVRRSGGGAGDMEAGMAEERRLRRPEK--LPPTVRFGS

Query:  EKMVRRRSEEECAICLEEFLAGENCQALPECNHFFHSDCIDVWFSKKFTCPICRNCVAA
        EKMVRRRSEEECAICLEEFL GENCQALPECNHFFHS+CIDVWFSKKFTCPICRNCVAA
Subjt:  EKMVRRRSEEECAICLEEFLAGENCQALPECNHFFHSDCIDVWFSKKFTCPICRNCVAA

A0A1S3BVC7 RING-H2 finger protein ATL39-like2.2e-7489.94Show/hide
Query:  MADPLLTLLFPMETMVPESPSPPVVHYTVTLDLRTSIIFSFSIILFFLFLFHVLSGFLQWFLDVRRSGGGAGDMEAGMAEERRLRRPEK--LPPTVRFGS
        M DPLLTLLFPMETMVPES SPPV+HYTVTLDLRTSIIFSFSIILFFLFLFHVLSGFLQWFLDVRRSGGG  D+EA MAEERR++R EK  LPPTV+FGS
Subjt:  MADPLLTLLFPMETMVPESPSPPVVHYTVTLDLRTSIIFSFSIILFFLFLFHVLSGFLQWFLDVRRSGGGAGDMEAGMAEERRLRRPEK--LPPTVRFGS

Query:  EKMVRRRSEEECAICLEEFLAGENCQALPECNHFFHSDCIDVWFSKKFTCPICRNCVAA
        EKMVRRRSEEECAICLEEFLAGENCQALPEC+HFFHS+CI+VWFSKKFTCPICRNCVAA
Subjt:  EKMVRRRSEEECAICLEEFLAGENCQALPECNHFFHSDCIDVWFSKKFTCPICRNCVAA

A0A5A7VAT0 RING-H2 finger protein ATL39-like2.2e-7489.94Show/hide
Query:  MADPLLTLLFPMETMVPESPSPPVVHYTVTLDLRTSIIFSFSIILFFLFLFHVLSGFLQWFLDVRRSGGGAGDMEAGMAEERRLRRPEK--LPPTVRFGS
        M DPLLTLLFPMETMVPES SPPV+HYTVTLDLRTSIIFSFSIILFFLFLFHVLSGFLQWFLDVRRSGGG  D+EA MAEERR++R EK  LPPTV+FGS
Subjt:  MADPLLTLLFPMETMVPESPSPPVVHYTVTLDLRTSIIFSFSIILFFLFLFHVLSGFLQWFLDVRRSGGGAGDMEAGMAEERRLRRPEK--LPPTVRFGS

Query:  EKMVRRRSEEECAICLEEFLAGENCQALPECNHFFHSDCIDVWFSKKFTCPICRNCVAA
        EKMVRRRSEEECAICLEEFLAGENCQALPEC+HFFHS+CI+VWFSKKFTCPICRNCVAA
Subjt:  EKMVRRRSEEECAICLEEFLAGENCQALPECNHFFHSDCIDVWFSKKFTCPICRNCVAA

A0A5D3D9M0 RING-H2 finger protein ATL39-like2.2e-7489.94Show/hide
Query:  MADPLLTLLFPMETMVPESPSPPVVHYTVTLDLRTSIIFSFSIILFFLFLFHVLSGFLQWFLDVRRSGGGAGDMEAGMAEERRLRRPEK--LPPTVRFGS
        M DPLLTLLFPMETMVPES SPPV+HYTVTLDLRTSIIFSFSIILFFLFLFHVLSGFLQWFLDVRRSGGG  D+EA MAEERR++R EK  LPPTV+FGS
Subjt:  MADPLLTLLFPMETMVPESPSPPVVHYTVTLDLRTSIIFSFSIILFFLFLFHVLSGFLQWFLDVRRSGGGAGDMEAGMAEERRLRRPEK--LPPTVRFGS

Query:  EKMVRRRSEEECAICLEEFLAGENCQALPECNHFFHSDCIDVWFSKKFTCPICRNCVAA
        EKMVRRRSEEECAICLEEFLAGENCQALPEC+HFFHS+CI+VWFSKKFTCPICRNCVAA
Subjt:  EKMVRRRSEEECAICLEEFLAGENCQALPECNHFFHSDCIDVWFSKKFTCPICRNCVAA

A0A6J1IG67 RING-H2 finger protein ATL39-like1.2e-6784.81Show/hide
Query:  MADPLLTLLFPMETMVPESPSPPV-VHYTVTLDLRTSIIFSFSIILFFLFLFHVLSGFLQWFLDVRRSGGGAGDMEAGMAEERRLRRPEKLPPTVRFGSE
        MADPLLTLLFPMETMV ES SPPV VHYTVTLDLRTSIIFS +IILFFLFL+HVLSGFLQWFL  RR     GD+EAGM EERR+RR EK+P  VRFGSE
Subjt:  MADPLLTLLFPMETMVPESPSPPV-VHYTVTLDLRTSIIFSFSIILFFLFLFHVLSGFLQWFLDVRRSGGGAGDMEAGMAEERRLRRPEKLPPTVRFGSE

Query:  KMVRRRSEEECAICLEEFLAGENCQALPECNHFFHSDCIDVWFSKKFTCPICRNCVAA
        +MVRRRSEEECAICLEEF+AGENCQALPECNHFFHSDCIDVWFSKKFTCPICR+C+AA
Subjt:  KMVRRRSEEECAICLEEFLAGENCQALPECNHFFHSDCIDVWFSKKFTCPICRNCVAA

SwissProt top hitse value%identityAlignment
P0C034 RING-H2 finger protein ATL103.9e-1255.1Show/hide
Query:  EEECAICLEEFLAGENCQALPECNHFFHSDCIDVWFSKKFTCPICRNCV
        +EEC ICL +F++GE  + LP+CNH FH  CID W  +  TCP CRNC+
Subjt:  EEECAICLEEFLAGENCQALPECNHFFHSDCIDVWFSKKFTCPICRNCV

P0C035 RING-H2 finger protein ATL605.1e-1253.06Show/hide
Query:  ECAICLEEFLAGENCQALPECNHFFHSDCIDVWFSKKFTCPICRNCVAA
        ECA+CL + + G+  + LP CNH FH DCID+WF    TCP+CRN V +
Subjt:  ECAICLEEFLAGENCQALPECNHFFHSDCIDVWFSKKFTCPICRNCVAA

Q9LRB7 E3 ubiquitin-protein ligase EL52.5e-1138.95Show/hide
Query:  RRSGGGAGDMEAGMAEERRLRRPEKLPPTVRFGSEKMVRRRSEE-------ECAICLEEFLAGENCQALPECNHFFHSDCIDVWFSKKFTCPICR
        RRSG G      G  +   LR    LP TV   S      + EE       ECA+CL E   GE  + LP C H FH++C+D+W     TCP+CR
Subjt:  RRSGGGAGDMEAGMAEERRLRRPEKLPPTVRFGSEKMVRRRSEE-------ECAICLEEFLAGENCQALPECNHFFHSDCIDVWFSKKFTCPICR

Q9LS99 RING-H2 finger protein ATL776.7e-1256.25Show/hide
Query:  EECAICLEEFLAGENCQALPECNHFFHSDCIDVWFSKKFTCPICRNCV
        EEC ICL +F+AGE  + LP+CNH FH  CID W ++  TCP CR+C+
Subjt:  EECAICLEEFLAGENCQALPECNHFFHSDCIDVWFSKKFTCPICRNCV

Q9XF63 RING-H2 finger protein ATL36.7e-1257.45Show/hide
Query:  ECAICLEEFLAGENCQALPECNHFFHSDCIDVWFSKKFTCPICRNCV
        EC+ICL E + G+  + LP+CNH FH +CID+WF    TCPICRN V
Subjt:  ECAICLEEFLAGENCQALPECNHFFHSDCIDVWFSKKFTCPICRNCV

Arabidopsis top hitse value%identityAlignment
AT1G49210.1 RING/U-box superfamily protein3.1e-1254.17Show/hide
Query:  EECAICLEEFLAGENCQALPECNHFFHSDCIDVWFSKKFTCPICRNCV
        EEC ICL +F++GE  + LP+CNH FH  CID W     TCP CR+C+
Subjt:  EECAICLEEFLAGENCQALPECNHFFHSDCIDVWFSKKFTCPICRNCV

AT1G49220.1 RING/U-box superfamily protein2.8e-1355.1Show/hide
Query:  EEECAICLEEFLAGENCQALPECNHFFHSDCIDVWFSKKFTCPICRNCV
        +EEC ICL +F++GE  + LP+CNH FH  CID W  +  TCP CRNC+
Subjt:  EEECAICLEEFLAGENCQALPECNHFFHSDCIDVWFSKKFTCPICRNCV

AT1G53820.1 RING/U-box superfamily protein3.6e-1353.06Show/hide
Query:  ECAICLEEFLAGENCQALPECNHFFHSDCIDVWFSKKFTCPICRNCVAA
        ECA+CL + + G+  + LP CNH FH DCID+WF    TCP+CRN V +
Subjt:  ECAICLEEFLAGENCQALPECNHFFHSDCIDVWFSKKFTCPICRNCVAA

AT1G72310.1 RING/U-box superfamily protein4.8e-1357.45Show/hide
Query:  ECAICLEEFLAGENCQALPECNHFFHSDCIDVWFSKKFTCPICRNCV
        EC+ICL E + G+  + LP+CNH FH +CID+WF    TCPICRN V
Subjt:  ECAICLEEFLAGENCQALPECNHFFHSDCIDVWFSKKFTCPICRNCV

AT3G18773.1 RING/U-box superfamily protein4.8e-1356.25Show/hide
Query:  EECAICLEEFLAGENCQALPECNHFFHSDCIDVWFSKKFTCPICRNCV
        EEC ICL +F+AGE  + LP+CNH FH  CID W ++  TCP CR+C+
Subjt:  EECAICLEEFLAGENCQALPECNHFFHSDCIDVWFSKKFTCPICRNCV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGATCCATTACTGACACTCCTCTTCCCCATGGAAACCATGGTCCCTGAATCTCCATCTCCTCCAGTTGTCCACTACACCGTAACCCTAGACCTCCGAACCTCCAT
AATCTTCTCCTTCTCCATAATCCTCTTCTTCCTCTTCCTCTTCCACGTCCTCAGCGGCTTCCTCCAGTGGTTCCTCGACGTCCGGCGCAGCGGAGGAGGCGCTGGAGACA
TGGAGGCGGGAATGGCGGAGGAGCGGCGGTTGAGGCGGCCGGAGAAGCTGCCACCGACGGTGAGGTTTGGGAGCGAGAAAATGGTGAGGAGGAGGAGCGAGGAGGAATGT
GCGATATGTTTGGAGGAGTTTTTGGCCGGAGAAAATTGCCAGGCGTTGCCGGAATGTAACCATTTTTTTCATTCGGATTGTATTGATGTTTGGTTTAGCAAGAAATTTAC
GTGCCCTATCTGTCGTAATTGTGTTGCAGCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCGGATCCATTACTGACACTCCTCTTCCCCATGGAAACCATGGTCCCTGAATCTCCATCTCCTCCAGTTGTCCACTACACCGTAACCCTAGACCTCCGAACCTCCAT
AATCTTCTCCTTCTCCATAATCCTCTTCTTCCTCTTCCTCTTCCACGTCCTCAGCGGCTTCCTCCAGTGGTTCCTCGACGTCCGGCGCAGCGGAGGAGGCGCTGGAGACA
TGGAGGCGGGAATGGCGGAGGAGCGGCGGTTGAGGCGGCCGGAGAAGCTGCCACCGACGGTGAGGTTTGGGAGCGAGAAAATGGTGAGGAGGAGGAGCGAGGAGGAATGT
GCGATATGTTTGGAGGAGTTTTTGGCCGGAGAAAATTGCCAGGCGTTGCCGGAATGTAACCATTTTTTTCATTCGGATTGTATTGATGTTTGGTTTAGCAAGAAATTTAC
GTGCCCTATCTGTCGTAATTGTGTTGCAGCTTAG
Protein sequenceShow/hide protein sequence
MADPLLTLLFPMETMVPESPSPPVVHYTVTLDLRTSIIFSFSIILFFLFLFHVLSGFLQWFLDVRRSGGGAGDMEAGMAEERRLRRPEKLPPTVRFGSEKMVRRRSEEEC
AICLEEFLAGENCQALPECNHFFHSDCIDVWFSKKFTCPICRNCVAA