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HG10014382 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10014382
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionRNase H domain-containing protein
Genome locationChr02:10372417..10372962
RNA-Seq ExpressionHG10014382
SyntenyHG10014382
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EEC72931.1 hypothetical protein OsI_06781 [Oryza sativa Indica Group]3.3e-0432Show/hide
Query:  MNTNASWNSGLGCGGLGWQVRDSLGYSIYADFKHVSREWSICVLEAQAIVERLRSLMFLNRDLPPILVESDAKRVVDQINQSMVDLTKVRNSIDEIEELV
        +N + S+++ L  GG+G  +RDS G +I+A  K ++R       E +A VE L   + L+  L PILVE+D   VV  +N    D +++ N + E + L+
Subjt:  MNTNASWNSGLGCGGLGWQVRDSLGYSIYADFKHVSREWSICVLEAQAIVERLRSLMFLNRDLPPILVESDAKRVVDQINQSMVDLTKVRNSIDEIEELV

Query:  IFLSPSLLSFPFCHKDENCKAHCIA
              L+S    H+ +N  +H +A
Subjt:  IFLSPSLLSFPFCHKDENCKAHCIA

KAG6599977.1 hypothetical protein SDJN03_05210, partial [Cucurbita argyrosperma subsp. sororia]2.3e-0531.73Show/hide
Query:  MNTNASWNSGLGCGGLGWQVRDSLGYSIYADFKHVSREWSICVLEAQAIVERLRSLMFLNRDL-----PPILVESDAKRVVDQINQSMVDLTKVRNSIDE
        +N+ ASW+   G GG+ W + DSLG SI  + K + R+W + +LE +A++E L++ + +   +     P I +E     +   +N + +DL ++ N +DE
Subjt:  MNTNASWNSGLGCGGLGWQVRDSLGYSIYADFKHVSREWSICVLEAQAIVERLRSLMFLNRDL-----PPILVESDAKRVVDQINQSMVDLTKVRNSIDE

Query:  IEEL
        I +L
Subjt:  IEEL

XP_022155262.1 uncharacterized protein LOC111022403 [Momordica charantia]5.2e-0533.33Show/hide
Query:  MNTNASWNSGLGCGGLGWQVRDSLGYSIYADFKHVSREWSICVLEAQAIVERLRSLMFLNRDLPPILVESDAKRVVDQINQSMVDLTKVRNSIDEIEELV
        +N +ASW+     GG+GW +R   G  + A  + V    ++ +LEA AI+E LR+L  L   L P+ +E+D+  V   +N+   DLTK    ++EI  L 
Subjt:  MNTNASWNSGLGCGGLGWQVRDSLGYSIYADFKHVSREWSICVLEAQAIVERLRSLMFLNRDLPPILVESDAKRVVDQINQSMVDLTKVRNSIDEIEELV

Query:  IFLSPSLLSFPFCHKDENCKAHCIAR
        +  S  +L+F    ++ N  AH +A+
Subjt:  IFLSPSLLSFPFCHKDENCKAHCIAR

TrEMBL top hitse value%identityAlignment
A0A2Z6PIX2 Reverse transcriptase domain-containing protein8.0e-0430.23Show/hide
Query:  NTNASWNSGLGCGGLGWQVRDSLGYSIYADFKHVSREWSICVLEAQAIVERLRSLMFLNRDLPPILVESDAKRVVDQINQSMVDLTKVRNSIDEIEELVI
        N +AS+ +  G  G GW VRD  G  I A    +    +I   EA AI E +  +  + +    +++ESD+K VVD I+ S V +++    I  I+ L++
Subjt:  NTNASWNSGLGCGGLGWQVRDSLGYSIYADFKHVSREWSICVLEAQAIVERLRSLMFLNRDLPPILVESDAKRVVDQINQSMVDLTKVRNSIDEIEELVI

Query:  FLSPSLLSFPFCHKDENCKAHCIARVVAS
          S       F  +  N   H +AR   S
Subjt:  FLSPSLLSFPFCHKDENCKAHCIARVVAS

A0A6J1DNV9 uncharacterized protein LOC1110224032.5e-0533.33Show/hide
Query:  MNTNASWNSGLGCGGLGWQVRDSLGYSIYADFKHVSREWSICVLEAQAIVERLRSLMFLNRDLPPILVESDAKRVVDQINQSMVDLTKVRNSIDEIEELV
        +N +ASW+     GG+GW +R   G  + A  + V    ++ +LEA AI+E LR+L  L   L P+ +E+D+  V   +N+   DLTK    ++EI  L 
Subjt:  MNTNASWNSGLGCGGLGWQVRDSLGYSIYADFKHVSREWSICVLEAQAIVERLRSLMFLNRDLPPILVESDAKRVVDQINQSMVDLTKVRNSIDEIEELV

Query:  IFLSPSLLSFPFCHKDENCKAHCIAR
        +  S  +L+F    ++ N  AH +A+
Subjt:  IFLSPSLLSFPFCHKDENCKAHCIAR

B8AFN2 RNase H domain-containing protein1.6e-0432Show/hide
Query:  MNTNASWNSGLGCGGLGWQVRDSLGYSIYADFKHVSREWSICVLEAQAIVERLRSLMFLNRDLPPILVESDAKRVVDQINQSMVDLTKVRNSIDEIEELV
        +N + S+++ L  GG+G  +RDS G +I+A  K ++R       E +A VE L   + L+  L PILVE+D   VV  +N    D +++ N + E + L+
Subjt:  MNTNASWNSGLGCGGLGWQVRDSLGYSIYADFKHVSREWSICVLEAQAIVERLRSLMFLNRDLPPILVESDAKRVVDQINQSMVDLTKVRNSIDEIEELV

Query:  IFLSPSLLSFPFCHKDENCKAHCIA
              L+S    H+ +N  +H +A
Subjt:  IFLSPSLLSFPFCHKDENCKAHCIA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATACCAATGCTTCTTGGAACTCTGGTCTAGGTTGTGGAGGGCTGGGATGGCAGGTTCGTGACTCACTTGGATATTCGATCTATGCTGATTTCAAGCATGTCTCACG
AGAGTGGTCAATTTGTGTGTTGGAAGCTCAAGCAATCGTTGAACGCCTTAGAAGTCTTATGTTCCTCAATCGTGATCTTCCTCCCATCTTGGTTGAATCTGATGCAAAAA
GAGTTGTGGATCAAATCAACCAATCTATGGTTGATCTCACTAAAGTGAGAAACTCCATCGATGAAATCGAAGAGCTAGTGATCTTTTTGAGTCCCTCTTTGCTGTCTTTT
CCGTTTTGCCACAAGGATGAGAATTGCAAAGCTCACTGTATTGCTCGTGTTGTAGCTAGTTTTGAAAACTTTTGTGAGGAGAGTTTTTCTTCCAAATCGAAAGATTGTGG
AATCTCTTTTGAGATTCTAATTTTGGTTGTTGAATGCTGTAAATGGGGAGTTATTGTTACTGGTTTCTACCAACATTTAATTTTTAATGAAGTTCTCTTTCAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGAATACCAATGCTTCTTGGAACTCTGGTCTAGGTTGTGGAGGGCTGGGATGGCAGGTTCGTGACTCACTTGGATATTCGATCTATGCTGATTTCAAGCATGTCTCACG
AGAGTGGTCAATTTGTGTGTTGGAAGCTCAAGCAATCGTTGAACGCCTTAGAAGTCTTATGTTCCTCAATCGTGATCTTCCTCCCATCTTGGTTGAATCTGATGCAAAAA
GAGTTGTGGATCAAATCAACCAATCTATGGTTGATCTCACTAAAGTGAGAAACTCCATCGATGAAATCGAAGAGCTAGTGATCTTTTTGAGTCCCTCTTTGCTGTCTTTT
CCGTTTTGCCACAAGGATGAGAATTGCAAAGCTCACTGTATTGCTCGTGTTGTAGCTAGTTTTGAAAACTTTTGTGAGGAGAGTTTTTCTTCCAAATCGAAAGATTGTGG
AATCTCTTTTGAGATTCTAATTTTGGTTGTTGAATGCTGTAAATGGGGAGTTATTGTTACTGGTTTCTACCAACATTTAATTTTTAATGAAGTTCTCTTTCAGTAA
Protein sequenceShow/hide protein sequence
MNTNASWNSGLGCGGLGWQVRDSLGYSIYADFKHVSREWSICVLEAQAIVERLRSLMFLNRDLPPILVESDAKRVVDQINQSMVDLTKVRNSIDEIEELVIFLSPSLLSF
PFCHKDENCKAHCIARVVASFENFCEESFSSKSKDCGISFEILILVVECCKWGVIVTGFYQHLIFNEVLFQ