| GenBank top hits | e value | %identity | Alignment |
|---|
| GFP82007.1 small nuclear ribonucleoprotein sm d1 [Phtheirospermum japonicum] | 1.0e-48 | 98.13 | Show/hide |
Query: MKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGRPLGRGRGRGRG
MKLNNETVSIELKNGTVVHGTITGVDISMNTHLK VKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGRP+GRGRGRGRG
Subjt: MKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGRPLGRGRGRGRG
Query: RGRGRGR
RGRGRGR
Subjt: RGRGRGR
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| XP_004150106.1 small nuclear ribonucleoprotein SmD1b [Cucumis sativus] | 2.0e-49 | 100 | Show/hide |
Query: MKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGRPLGRGRGRGRG
MKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGRPLGRGRGRGRG
Subjt: MKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGRPLGRGRGRGRG
Query: RGRGRGR
RGRGRGR
Subjt: RGRGRGR
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| XP_022931093.1 small nuclear ribonucleoprotein SmD1b [Cucurbita moschata] | 4.5e-49 | 99.07 | Show/hide |
Query: MKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGRPLGRGRGRGRG
MKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAG+PLGRGRGRGRG
Subjt: MKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGRPLGRGRGRGRG
Query: RGRGRGR
RGRGRGR
Subjt: RGRGRGR
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| XP_022963993.1 small nuclear ribonucleoprotein SmD1b-like [Cucurbita moschata] | 7.7e-49 | 98.13 | Show/hide |
Query: MKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGRPLGRGRGRGRG
MKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAG+P+GRGRGRGRG
Subjt: MKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGRPLGRGRGRGRG
Query: RGRGRGR
RGRGRGR
Subjt: RGRGRGR
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| XP_038896756.1 small nuclear ribonucleoprotein SmD1b isoform X2 [Benincasa hispida] | 2.0e-49 | 100 | Show/hide |
Query: MKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGRPLGRGRGRGRG
MKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGRPLGRGRGRGRG
Subjt: MKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGRPLGRGRGRGRG
Query: RGRGRGR
RGRGRGR
Subjt: RGRGRGR
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A0A0LD16 Small nuclear ribonucleoprotein Sm D1 | 9.8e-50 | 100 | Show/hide |
Query: MKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGRPLGRGRGRGRG
MKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGRPLGRGRGRGRG
Subjt: MKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGRPLGRGRGRGRG
Query: RGRGRGR
RGRGRGR
Subjt: RGRGRGR
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| A0A1S3C0D0 Small nuclear ribonucleoprotein Sm D1 | 9.8e-50 | 100 | Show/hide |
Query: MKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGRPLGRGRGRGRG
MKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGRPLGRGRGRGRG
Subjt: MKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGRPLGRGRGRGRG
Query: RGRGRGR
RGRGRGR
Subjt: RGRGRGR
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| A0A6J1DVC4 Small nuclear ribonucleoprotein Sm D1 | 9.8e-50 | 100 | Show/hide |
Query: MKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGRPLGRGRGRGRG
MKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGRPLGRGRGRGRG
Subjt: MKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGRPLGRGRGRGRG
Query: RGRGRGR
RGRGRGR
Subjt: RGRGRGR
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| A0A6J1EXE6 Small nuclear ribonucleoprotein Sm D1 | 2.2e-49 | 99.07 | Show/hide |
Query: MKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGRPLGRGRGRGRG
MKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAG+PLGRGRGRGRG
Subjt: MKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGRPLGRGRGRGRG
Query: RGRGRGR
RGRGRGR
Subjt: RGRGRGR
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| A0A6J1K070 Small nuclear ribonucleoprotein Sm D1 | 2.2e-49 | 99.07 | Show/hide |
Query: MKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGRPLGRGRGRGRG
MKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAG+PLGRGRGRGRG
Subjt: MKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGRPLGRGRGRGRG
Query: RGRGRGR
RGRGRGR
Subjt: RGRGRGR
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P62314 Small nuclear ribonucleoprotein Sm D1 | 3.8e-35 | 73.83 | Show/hide |
Query: MKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGRPLGRGRGRGRG
MKL++ETV+IELKNGT VHGTITGVD+SMNTHLKAVK+TLK + PV ++ LS+RGNNIRY+ILPDSL L+TLLV+ P+VK KK A GRGRGRGRG
Subjt: MKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGRPLGRGRGRGRG
Query: RGRGRGR
RGRGRGR
Subjt: RGRGRGR
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| Q3ZC10 Small nuclear ribonucleoprotein Sm D1 | 3.8e-35 | 73.83 | Show/hide |
Query: MKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGRPLGRGRGRGRG
MKL++ETV+IELKNGT VHGTITGVD+SMNTHLKAVK+TLK + PV ++ LS+RGNNIRY+ILPDSL L+TLLV+ P+VK KK A GRGRGRGRG
Subjt: MKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGRPLGRGRGRGRG
Query: RGRGRGR
RGRGRGR
Subjt: RGRGRGR
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| Q4R5F6 Small nuclear ribonucleoprotein Sm D1 | 3.8e-35 | 73.83 | Show/hide |
Query: MKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGRPLGRGRGRGRG
MKL++ETV+IELKNGT VHGTITGVD+SMNTHLKAVK+TLK + PV ++ LS+RGNNIRY+ILPDSL L+TLLV+ P+VK KK A GRGRGRGRG
Subjt: MKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGRPLGRGRGRGRG
Query: RGRGRGR
RGRGRGR
Subjt: RGRGRGR
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| Q9SSF1 Small nuclear ribonucleoprotein SmD1a | 8.8e-48 | 89.72 | Show/hide |
Query: MKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGRPLGRGRGRGRG
MKLNNETVSIELKNGTVVHGTITGVD+SMNTHLK VK++LKGKNPVT+DHLS+RGNNIRYYILPDSLNLETLLVE+TPRVKPKKP AG+ +GRGRGRGRG
Subjt: MKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGRPLGRGRGRGRG
Query: RGRGRGR
RGRGRGR
Subjt: RGRGRGR
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| Q9SY09 Small nuclear ribonucleoprotein SmD1b | 1.4e-48 | 92.52 | Show/hide |
Query: MKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGR-PLGRGRGRGR
MKLNNETVSIELKNGT+VHGTITGVD+SMNTHLKAVKLTLKGKNPVT+DHLSVRGNNIRYYILPDSLNLETLLVE+TPR+KPKKPTAG+ P GRGRGRGR
Subjt: MKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGR-PLGRGRGRGR
Query: GRGRGRG
GRGRGRG
Subjt: GRGRGRG
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| Arabidopsis top hits | e value | %identity | Alignment |
|---|
| AT1G20580.1 Small nuclear ribonucleoprotein family protein | 5.0e-06 | 31.37 | Show/hide |
Query: VSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGRPLGRGRGRGRGR---GRG
V++ELK+G + G++ + + N L+ + T K ++H+ +RG+ +R+ ++PD L + R+K K + G +GRGRG RG+ G G
Subjt: VSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGRPLGRGRGRGRGR---GRG
Query: RG
RG
Subjt: RG
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| AT3G07590.1 Small nuclear ribonucleoprotein family protein | 6.3e-49 | 89.72 | Show/hide |
Query: MKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGRPLGRGRGRGRG
MKLNNETVSIELKNGTVVHGTITGVD+SMNTHLK VK++LKGKNPVT+DHLS+RGNNIRYYILPDSLNLETLLVE+TPRVKPKKP AG+ +GRGRGRGRG
Subjt: MKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGRPLGRGRGRGRG
Query: RGRGRGR
RGRGRGR
Subjt: RGRGRGR
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| AT3G07590.2 Small nuclear ribonucleoprotein family protein | 6.3e-49 | 89.72 | Show/hide |
Query: MKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGRPLGRGRGRGRG
MKLNNETVSIELKNGTVVHGTITGVD+SMNTHLK VK++LKGKNPVT+DHLS+RGNNIRYYILPDSLNLETLLVE+TPRVKPKKP AG+ +GRGRGRGRG
Subjt: MKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGRPLGRGRGRGRG
Query: RGRGRGR
RGRGRGR
Subjt: RGRGRGR
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| AT4G02840.1 Small nuclear ribonucleoprotein family protein | 9.6e-50 | 92.52 | Show/hide |
Query: MKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGR-PLGRGRGRGR
MKLNNETVSIELKNGT+VHGTITGVD+SMNTHLKAVKLTLKGKNPVT+DHLSVRGNNIRYYILPDSLNLETLLVE+TPR+KPKKPTAG+ P GRGRGRGR
Subjt: MKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGR-PLGRGRGRGR
Query: GRGRGRG
GRGRGRG
Subjt: GRGRGRG
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| AT4G02840.2 Small nuclear ribonucleoprotein family protein | 2.6e-47 | 84.62 | Show/hide |
Query: MKLNNETVSIELKNGTVVHGTIT----------GVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGR-
MKLNNETVSIELKNGT+VHGTIT GVD+SMNTHLKAVKLTLKGKNPVT+DHLSVRGNNIRYYILPDSLNLETLLVE+TPR+KPKKPTAG+
Subjt: MKLNNETVSIELKNGTVVHGTIT----------GVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGR-
Query: PLGRGRGRGRGRGRGRG
P GRGRGRGRGRGRGRG
Subjt: PLGRGRGRGRGRGRGRG
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