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HG10014451 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10014451
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationChr02:11623144..11627481
RNA-Seq ExpressionHG10014451
SyntenyHG10014451
Gene Ontology termsGO:0003824 - catalytic activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
PRQ21155.1 putative RNA-directed DNA polymerase [Rosa chinensis]2.2e-1340.37Show/hide
Query:  SMSLFLPHMPDDIKLSLANYLGVKVVHNHGKYLGVSFSLSKNKHVSFTLAKKRSTKRCRDGKGRLFSKAGKEMLLNVVTQAIPAYTLSCFKLSLKSYKNL
        S  +F   +P+  KLSLA++LGV +   H KYLG+   L +N+  +F   K+R +K+    +G+L S AGK++L+ VV QA+P+Y +SCF L      +L
Subjt:  SMSLFLPHMPDDIKLSLANYLGVKVVHNHGKYLGVSFSLSKNKHVSFTLAKKRSTKRCRDGKGRLFSKAGKEMLLNVVTQAIPAYTLSCFKLSLKSYKNL

Query:  HQIMANFYW
        HQ+ + F+W
Subjt:  HQIMANFYW

XP_024172251.1 uncharacterized protein LOC112178325 [Rosa chinensis]3.7e-1341.28Show/hide
Query:  SMSLFLPHMPDDIKLSLANYLGVKVVHNHGKYLGVSFSLSKNKHVSFTLAKKRSTKRCRDGKGRLFSKAGKEMLLNVVTQAIPAYTLSCFKLSLKSYKNL
        S  +F   +P+  KLSLA++LGV +   H KYLG+   L +N   +F   K+R +K+    +G+L S AGK++L+ VV QA+P+Y +SCF L      +L
Subjt:  SMSLFLPHMPDDIKLSLANYLGVKVVHNHGKYLGVSFSLSKNKHVSFTLAKKRSTKRCRDGKGRLFSKAGKEMLLNVVTQAIPAYTLSCFKLSLKSYKNL

Query:  HQIMANFYW
        HQ+ A F+W
Subjt:  HQIMANFYW

XP_024172256.1 uncharacterized protein LOC112178331 [Rosa chinensis]2.2e-1340.37Show/hide
Query:  SMSLFLPHMPDDIKLSLANYLGVKVVHNHGKYLGVSFSLSKNKHVSFTLAKKRSTKRCRDGKGRLFSKAGKEMLLNVVTQAIPAYTLSCFKLSLKSYKNL
        S  +F   +P+  KLSLA++LGV +   H KYLG+   L +N+  +F   K+R +K+    +G+L S AGK++L+ VV QA+P+Y +SCF L      +L
Subjt:  SMSLFLPHMPDDIKLSLANYLGVKVVHNHGKYLGVSFSLSKNKHVSFTLAKKRSTKRCRDGKGRLFSKAGKEMLLNVVTQAIPAYTLSCFKLSLKSYKNL

Query:  HQIMANFYW
        HQ+ + F+W
Subjt:  HQIMANFYW

XP_024200533.1 uncharacterized mitochondrial protein AtMg00310-like [Rosa chinensis]1.2e-1440Show/hide
Query:  LMSSMSLFLPHMPDDIKLSLANYLGVKVVHNHGKYLGVSFSLSKNKHVSFTLAKKRSTKRCRDGKGRLFSKAGKEMLLNVVTQAIPAYTLSCFKLSLKSY
        L  S  +F  ++  D K +LA+ LGV+ V +HG+YLG+   + K+K V F+  K+R TK+    + ++ S AGKE+L+  V Q IPAY +SC+ L    +
Subjt:  LMSSMSLFLPHMPDDIKLSLANYLGVKVVHNHGKYLGVSFSLSKNKHVSFTLAKKRSTKRCRDGKGRLFSKAGKEMLLNVVTQAIPAYTLSCFKLSLKSY

Query:  KNLHQIMANFYWSRS
        ++LHQ+ A F+W  S
Subjt:  KNLHQIMANFYWSRS

XP_030487384.1 uncharacterized protein LOC115704310 [Cannabis sativa]4.4e-1436.64Show/hide
Query:  KEFMKRRRVKSSTLMS---SMSLFLPHMPDDIKLSLANYLGVKVVHNHGKYLGVSFSLSKNKHVSFTLAKKRSTKRCRDGKGRLFSKAGKEMLLNVVTQA
        KE +++  + S  L++   S   F  ++   +K  LA  +GVKVV N+GKYLG+   + + K   F   K R   + +  KG  FS A KE+L+  + QA
Subjt:  KEFMKRRRVKSSTLMS---SMSLFLPHMPDDIKLSLANYLGVKVVHNHGKYLGVSFSLSKNKHVSFTLAKKRSTKRCRDGKGRLFSKAGKEMLLNVVTQA

Query:  IPAYTLSCFKLSLKSYKNLHQIMANFYWSRS
        IP YT+SCF+L  K+  ++H + A F+W  S
Subjt:  IPAYTLSCFKLSLKSYKNLHQIMANFYWSRS

TrEMBL top hitse value%identityAlignment
A0A803NHG3 Uncharacterized protein6.6e-1646.88Show/hide
Query:  KLSLANYLGVKVVHNHGKYLGVSFSLSKNKHVSFTLAKKRSTKRCRDGKGRLFSKAGKEMLLNVVTQAIPAYTLSCFKLSLKSYKNLHQIMANFYW
        KL LA +LGVKVV NHGKYLG+   + +NK   F + K R   R R  KG +FS   KE+L+  + QAIPAYT+SC++L+  +  ++H++ A F+W
Subjt:  KLSLANYLGVKVVHNHGKYLGVSFSLSKNKHVSFTLAKKRSTKRCRDGKGRLFSKAGKEMLLNVVTQAIPAYTLSCFKLSLKSYKNLHQIMANFYW

A0A803PM68 Uncharacterized protein9.6e-1534.9Show/hide
Query:  LSKTEQKGKYFPLRTLLTKEFMKRRRVKSSTLMS---SMSLFLPHMPDDIKLSLANYLGVKVVHNHGKYLGVSFSLSKNKHVSFTLAKKRSTKRCRDGKG
        L  TE + K+F       +E +++  + S  +++   S   F   + D +K  LA  +GVKVV N+GKYLG+   + + K   F   K +   + +  KG
Subjt:  LSKTEQKGKYFPLRTLLTKEFMKRRRVKSSTLMS---SMSLFLPHMPDDIKLSLANYLGVKVVHNHGKYLGVSFSLSKNKHVSFTLAKKRSTKRCRDGKG

Query:  RLFSKAGKEMLLNVVTQAIPAYTLSCFKLSLKSYKNLHQIMANFYWSRS
          FS AGKE+L+  + QAIP YT+SCF+L  K+  ++H + A F+W  S
Subjt:  RLFSKAGKEMLLNVVTQAIPAYTLSCFKLSLKSYKNLHQIMANFYWSRS

A0A803PWX1 Uncharacterized protein1.3e-1443Show/hide
Query:  IKLSLANYLGVKVVHNHGKYLGVSFSLSKNKHVSFTLAKKRSTKRCRDGKGRLFSKAGKEMLLNVVTQAIPAYTLSCFKLSLKSYKNLHQIMANFYWSRS
        ++  LAN +GVKVV N+GKYLG+   + + K   F   K +   + +  KG  FS AGKE+L+  V QAIP YT+SCF+L  K+  ++H + A F+W  S
Subjt:  IKLSLANYLGVKVVHNHGKYLGVSFSLSKNKHVSFTLAKKRSTKRCRDGKGRLFSKAGKEMLLNVVTQAIPAYTLSCFKLSLKSYKNLHQIMANFYWSRS

A0A803QE56 Uncharacterized protein1.1e-1544.79Show/hide
Query:  DIKLSLANYLGVKVVHNHGKYLGVSFSLSKNKHVSFTLAKKRSTKRCRDGKGRLFSKAGKEMLLNVVTQAIPAYTLSCFKLSLKSYKNLHQIMANF
        D+K+ +A  LG+K+V NHGKYLG+   + +NK   F + K R   + R  KG +FS AGKE+L+  + QAIP YT+SCF+L+  +  N+H++ A F
Subjt:  DIKLSLANYLGVKVVHNHGKYLGVSFSLSKNKHVSFTLAKKRSTKRCRDGKGRLFSKAGKEMLLNVVTQAIPAYTLSCFKLSLKSYKNLHQIMANF

A0A803QJV0 Uncharacterized protein2.1e-1444.79Show/hide
Query:  KLSLANYLGVKVVHNHGKYLGVSFSLSKNKHVSFTLAKKRSTKRCRDGKGRLFSKAGKEMLLNVVTQAIPAYTLSCFKLSLKSYKNLHQIMANFYW
        KL LA +LGVKVV NHGKYLG+   + +NK   F + K R     R  KG +FS  G E+L+  + QAIPAYT+S ++L+  +  ++H++ A F+W
Subjt:  KLSLANYLGVKVVHNHGKYLGVSFSLSKNKHVSFTLAKKRSTKRCRDGKGRLFSKAGKEMLLNVVTQAIPAYTLSCFKLSLKSYKNLHQIMANFYW

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCAAATCCATTGATCCTCATGATTCATCAGACTGATGAGTATTTTGATGATCTCATCAACATCTTCCTAAAGAAAGCAATCTCTCAGTTTTCCCAAATTCCAATGCC
CATTGGGAGAAATAAACTCTGCAACTCTGATCTCGTTGTTCCTCCCCCATGGGAGACCACTCTAAACCTAGAAGGCCTAGGAACCCAAGGGTCTTTGAAAGCAACAGTAG
AAACCCCATTACCGATGTTTTTCCGGATACCCCCAGAAGAAGATCTCTTCCCCAACACAATCCTCTCCAAAACAGAACAGAAAGGAAAATACTTCCCTTTAAGAACCCTG
CTAACCAAGGAGTTTATGAAAAGGCGTCGGGTCAAATCATCAACTTTGATGAGTTCGATGTCGCTTTTCCTCCCCCATATGCCCGATGATATCAAGCTTTCCTTAGCAAA
TTATCTTGGTGTGAAAGTTGTCCACAATCATGGAAAGTACCTTGGAGTTTCTTTCTCACTATCCAAAAACAAGCATGTTTCTTTTACTCTTGCAAAGAAAAGGTCTACAA
AGCGTTGCAGGGATGGAAAGGGGCGTCTTTTCTCCAAGGCGGGCAAAGAGATGTTACTAAATGTAGTGACTCAGGCTATTCCAGCTTACACTCTCAGTTGTTTCAAGCTA
TCACTAAAATCCTATAAAAACCTCCATCAAATTATGGCTAATTTCTATTGGTCAAGATCCTTGCCTGTGGATCTGGATGCGATAAATCCTTCTACTGTCGTCGAGGTTAA
ATGTAGGATTCCTCCTCCGGGAATTTTTAAGATGAATTATGATACAACTATTGGAAGCGAAAAGATGGGCCTTAGTCCTGTGTTGTTCGTGATTCCAACGGCAAGCCCCT
GA
mRNA sequenceShow/hide mRNA sequence
ATGCCAAATCCATTGATCCTCATGATTCATCAGACTGATGAGTATTTTGATGATCTCATCAACATCTTCCTAAAGAAAGCAATCTCTCAGTTTTCCCAAATTCCAATGCC
CATTGGGAGAAATAAACTCTGCAACTCTGATCTCGTTGTTCCTCCCCCATGGGAGACCACTCTAAACCTAGAAGGCCTAGGAACCCAAGGGTCTTTGAAAGCAACAGTAG
AAACCCCATTACCGATGTTTTTCCGGATACCCCCAGAAGAAGATCTCTTCCCCAACACAATCCTCTCCAAAACAGAACAGAAAGGAAAATACTTCCCTTTAAGAACCCTG
CTAACCAAGGAGTTTATGAAAAGGCGTCGGGTCAAATCATCAACTTTGATGAGTTCGATGTCGCTTTTCCTCCCCCATATGCCCGATGATATCAAGCTTTCCTTAGCAAA
TTATCTTGGTGTGAAAGTTGTCCACAATCATGGAAAGTACCTTGGAGTTTCTTTCTCACTATCCAAAAACAAGCATGTTTCTTTTACTCTTGCAAAGAAAAGGTCTACAA
AGCGTTGCAGGGATGGAAAGGGGCGTCTTTTCTCCAAGGCGGGCAAAGAGATGTTACTAAATGTAGTGACTCAGGCTATTCCAGCTTACACTCTCAGTTGTTTCAAGCTA
TCACTAAAATCCTATAAAAACCTCCATCAAATTATGGCTAATTTCTATTGGTCAAGATCCTTGCCTGTGGATCTGGATGCGATAAATCCTTCTACTGTCGTCGAGGTTAA
ATGTAGGATTCCTCCTCCGGGAATTTTTAAGATGAATTATGATACAACTATTGGAAGCGAAAAGATGGGCCTTAGTCCTGTGTTGTTCGTGATTCCAACGGCAAGCCCCT
GA
Protein sequenceShow/hide protein sequence
MPNPLILMIHQTDEYFDDLINIFLKKAISQFSQIPMPIGRNKLCNSDLVVPPPWETTLNLEGLGTQGSLKATVETPLPMFFRIPPEEDLFPNTILSKTEQKGKYFPLRTL
LTKEFMKRRRVKSSTLMSSMSLFLPHMPDDIKLSLANYLGVKVVHNHGKYLGVSFSLSKNKHVSFTLAKKRSTKRCRDGKGRLFSKAGKEMLLNVVTQAIPAYTLSCFKL
SLKSYKNLHQIMANFYWSRSLPVDLDAINPSTVVEVKCRIPPPGIFKMNYDTTIGSEKMGLSPVLFVIPTASP