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HG10014503 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10014503
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationChr02:12908760..12909221
RNA-Seq ExpressionHG10014503
SyntenyHG10014503
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_017217082.1 PREDICTED: uncharacterized protein LOC108194640 [Daucus carota subsp. sativus]3.2e-0453.49Show/hide
Query:  SKADWLKWGDKNTAWFHHKVSQRRKRNEVKGILDTDESGRIKR
        S+A WLK GDKNT +FHHK S R+K+NE+KG+ D D   ++++
Subjt:  SKADWLKWGDKNTAWFHHKVSQRRKRNEVKGILDTDESGRIKR
XP_030487384.1 uncharacterized protein LOC115704310 [Cannabis sativa]5.0e-0562.86Show/hide
Query:  SKADWLKWGDKNTAWFHHKVSQRRKRNEVKGILDT
        S+A WL+WGD+NT +FHHK S RRK+NE+KG+ D+
Subjt:  SKADWLKWGDKNTAWFHHKVSQRRKRNEVKGILDT
XP_030942013.1 uncharacterized protein LOC115967068 [Quercus lobata]1.3e-0540.28Show/hide
Query:  EILPLNVFRSSLEELKVLFKNVLQAILRGSL--NGGSKADWLKWGDKNTAWFHHKVSQRRKRNEVKGILDTD
        E+  LN+    +EE+KVL K + +  LR  +  N  S+A W+K GD+NT +FH   S RR++N +KG+ D +
Subjt:  EILPLNVFRSSLEELKVLFKNVLQAILRGSL--NGGSKADWLKWGDKNTAWFHHKVSQRRKRNEVKGILDTD
TrEMBL top hitse value%identityAlignment
A0A7N2R0C3 Reverse transcriptase domain-containing protein1.4e-0539.71Show/hide
Query:  LNVFRSSLEELKVLFKNVLQAILRGSL--NGGSKADWLKWGDKNTAWFHHKVSQRRKRNEVKGILDTD
        LN+   S EE++ L K + + +LR  +  N  S+A W+K+GD+NT +FH   + RR++N+++GILD++
Subjt:  LNVFRSSLEELKVLFKNVLQAILRGSL--NGGSKADWLKWGDKNTAWFHHKVSQRRKRNEVKGILDTD
A0A803P3X4 Uncharacterized protein1.4e-0567.65Show/hide
Query:  SKADWLKWGDKNTAWFHHKVSQRRKRNEVKGILD
        S+A WLKWGD+NT +FHHK S RRK+NE+KG+ D
Subjt:  SKADWLKWGDKNTAWFHHKVSQRRKRNEVKGILD
A0A803PV25 Uncharacterized protein5.4e-0564.71Show/hide
Query:  SKADWLKWGDKNTAWFHHKVSQRRKRNEVKGILD
        S+A WL+WGD+NT +FHHK S RRK+NE+KG+ D
Subjt:  SKADWLKWGDKNTAWFHHKVSQRRKRNEVKGILD
A0A803PWX1 Uncharacterized protein4.1e-0564.71Show/hide
Query:  SKADWLKWGDKNTAWFHHKVSQRRKRNEVKGILD
        S+A WL+WGD+NT +FHHK S RRK+NE+KG+ D
Subjt:  SKADWLKWGDKNTAWFHHKVSQRRKRNEVKGILD
A0A803Q3G0 Uncharacterized protein7.0e-0564.71Show/hide
Query:  SKADWLKWGDKNTAWFHHKVSQRRKRNEVKGILD
        S+A WL+WGD+NT +FHHK S RRK+NE+KG+ D
Subjt:  SKADWLKWGDKNTAWFHHKVSQRRKRNEVKGILD
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCTATGGAATGCTTATAGGAGACATTCTCACCCTTTTCGTTTTAATGAGCAGTGGATTCTTCATAATGAATGTCGAGATATTGCCTCTCAATGTGTTTCGGTCAAG
CCTGGAGGAGCTGAAAGTTCTCTTTAAAAATGTCTTACAAGCTATACTCAGAGGCTCTCTAAATGGGGGATCTAAAGCTGATTGGTTAAAATGGGGAGACAAGAACACCG
CTTGGTTTCACCACAAGGTTTCTCAAAGAAGGAAGAGGAACGAAGTCAAAGGTATTCTAGATACAGATGAGTCTGGTAGGATCAAGCGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGCTATGGAATGCTTATAGGAGACATTCTCACCCTTTTCGTTTTAATGAGCAGTGGATTCTTCATAATGAATGTCGAGATATTGCCTCTCAATGTGTTTCGGTCAAG
CCTGGAGGAGCTGAAAGTTCTCTTTAAAAATGTCTTACAAGCTATACTCAGAGGCTCTCTAAATGGGGGATCTAAAGCTGATTGGTTAAAATGGGGAGACAAGAACACCG
CTTGGTTTCACCACAAGGTTTCTCAAAGAAGGAAGAGGAACGAAGTCAAAGGTATTCTAGATACAGATGAGTCTGGTAGGATCAAGCGTTAG
Protein sequenceShow/hide protein sequence
MGYGMLIGDILTLFVLMSSGFFIMNVEILPLNVFRSSLEELKVLFKNVLQAILRGSLNGGSKADWLKWGDKNTAWFHHKVSQRRKRNEVKGILDTDESGRIKR