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HG10014504 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10014504
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionAuxin-responsive protein
Genome locationChr02:12967557..12971265
RNA-Seq ExpressionHG10014504
SyntenyHG10014504
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0016020 - membrane (cellular component)
InterPro domainsIPR003311 - AUX/IAA protein
IPR033389 - AUX/IAA domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GAV62208.1 AUX_IAA domain-containing protein [Cephalotus follicularis]1.0e-0658Show/hide
Query:  MSKLLDGSSHFMLTYEDREGVWMLVGDVPWVYVANRVTLLSATSSKRVDG
        +SKLLDGSS F+LTYED+EG WMLVGDVPW    N V  L    +   +G
Subjt:  MSKLLDGSSHFMLTYEDREGVWMLVGDVPWVYVANRVTLLSATSSKRVDG

KAG4131680.1 hypothetical protein ERO13_D09G228200v2 [Gossypium hirsutum]1.0e-0659.18Show/hide
Query:  SKLLDGSSHFMLTYEDREGVWMLVGDVPWVYVANRVTLLSATSSKRVDG
        SKLLDGSS F+LTYED+EG WMLVGDVPW+     V  L    +  V+G
Subjt:  SKLLDGSSHFMLTYEDREGVWMLVGDVPWVYVANRVTLLSATSSKRVDG

XP_011649125.1 auxin-responsive protein IAA13 isoform X1 [Cucumis sativus]7.9e-0761.22Show/hide
Query:  SKLLDGSSHFMLTYEDREGVWMLVGDVPWVYVANRVTLLSATSSKRVDG
        SKLLDGSS F+LTYEDREG WMLVGDVPW    N V  L    +   +G
Subjt:  SKLLDGSSHFMLTYEDREGVWMLVGDVPWVYVANRVTLLSATSSKRVDG

XP_011649126.1 auxin-responsive protein IAA13 isoform X2 [Cucumis sativus]7.9e-0761.22Show/hide
Query:  SKLLDGSSHFMLTYEDREGVWMLVGDVPWVYVANRVTLLSATSSKRVDG
        SKLLDGSS F+LTYEDREG WMLVGDVPW    N V  L    +   +G
Subjt:  SKLLDGSSHFMLTYEDREGVWMLVGDVPWVYVANRVTLLSATSSKRVDG

XP_016715837.2 auxin-responsive protein IAA12 isoform X1 [Gossypium hirsutum]1.0e-0659.18Show/hide
Query:  SKLLDGSSHFMLTYEDREGVWMLVGDVPWVYVANRVTLLSATSSKRVDG
        SKLLDGSS F+LTYED+EG WMLVGDVPW+     V  L    +  V+G
Subjt:  SKLLDGSSHFMLTYEDREGVWMLVGDVPWVYVANRVTLLSATSSKRVDG

TrEMBL top hitse value%identityAlignment
A0A0A0LKJ5 Auxin-responsive protein3.8e-0761.22Show/hide
Query:  SKLLDGSSHFMLTYEDREGVWMLVGDVPWVYVANRVTLLSATSSKRVDG
        SKLLDGSS F+LTYEDREG WMLVGDVPW    N V  L    +   +G
Subjt:  SKLLDGSSHFMLTYEDREGVWMLVGDVPWVYVANRVTLLSATSSKRVDG

A0A1U8LMP9 Auxin-responsive protein5.0e-0759.18Show/hide
Query:  SKLLDGSSHFMLTYEDREGVWMLVGDVPWVYVANRVTLLSATSSKRVDG
        SKLLDGSS F+LTYED+EG WMLVGDVPW+     V  L    +  V+G
Subjt:  SKLLDGSSHFMLTYEDREGVWMLVGDVPWVYVANRVTLLSATSSKRVDG

A0A484NP14 Multifunctional fusion protein5.0e-0743.02Show/hide
Query:  LLDGSSHFMLTYEDREGVWMLVGDVPW-VYVANRVTLLSATSSKRVD-GPPLVSTMTLKKPKLDESFEEAAHETGKLVDTTIQHHQ
        LLDGSS F+LTYED+EG WMLVGDVPW ++V +   L  A  S+    GP L +T+ L  P      +     +G ++   I  HQ
Subjt:  LLDGSSHFMLTYEDREGVWMLVGDVPW-VYVANRVTLLSATSSKRVD-GPPLVSTMTLKKPKLDESFEEAAHETGKLVDTTIQHHQ

A0A5D2JP73 Auxin-responsive protein5.0e-0759.18Show/hide
Query:  SKLLDGSSHFMLTYEDREGVWMLVGDVPWVYVANRVTLLSATSSKRVDG
        SKLLDGSS F+LTYED+EG WMLVGDVPW+     V  L    +  V+G
Subjt:  SKLLDGSSHFMLTYEDREGVWMLVGDVPWVYVANRVTLLSATSSKRVDG

A0A5J5Q6M5 Auxin-responsive protein5.0e-0759.18Show/hide
Query:  SKLLDGSSHFMLTYEDREGVWMLVGDVPWVYVANRVTLLSATSSKRVDG
        SKLLDGSS F+LTYED+EG WMLVGDVPW+     V  L    +  V+G
Subjt:  SKLLDGSSHFMLTYEDREGVWMLVGDVPWVYVANRVTLLSATSSKRVDG

SwissProt top hitse value%identityAlignment
A2XB18 Auxin-responsive protein IAA101.1e-0650Show/hide
Query:  KLLDGSSHFMLTYEDREGVWMLVGDVPWVYVANRVTLLSATSSKRVDG
        KLLD S+ + LTYEDR+G WMLVGDVPW    + V  L    +   +G
Subjt:  KLLDGSSHFMLTYEDREGVWMLVGDVPWVYVANRVTLLSATSSKRVDG

Q0DWF2 Auxin-responsive protein IAA101.1e-0650Show/hide
Query:  KLLDGSSHFMLTYEDREGVWMLVGDVPWVYVANRVTLLSATSSKRVDG
        KLLD S+ + LTYEDR+G WMLVGDVPW    + V  L    +   +G
Subjt:  KLLDGSSHFMLTYEDREGVWMLVGDVPWVYVANRVTLLSATSSKRVDG

Q38828 Auxin-responsive protein IAA101.6e-0761.54Show/hide
Query:  SKLLDGSSHFMLTYEDREGVWMLVGDVPWVYVANRVTLL
        SKLLDGSS +++TY+D++G WMLVGDVPW      VT L
Subjt:  SKLLDGSSHFMLTYEDREGVWMLVGDVPWVYVANRVTLL

Q38830 Auxin-responsive protein IAA122.5e-0856.25Show/hide
Query:  KLLDGSSHFMLTYEDREGVWMLVGDVPWVYVANRVTLLSATSSKRVDG
        +LLDGSS F+LTYED+EG WMLVGDVPW    N V  L    +    G
Subjt:  KLLDGSSHFMLTYEDREGVWMLVGDVPWVYVANRVTLLSATSSKRVDG

Q38831 Auxin-responsive protein IAA131.1e-0856.25Show/hide
Query:  KLLDGSSHFMLTYEDREGVWMLVGDVPWVYVANRVTLLSATSSKRVDG
        +LLDGSS F+LTYED+EG WMLVGDVPW    N V  L    +   +G
Subjt:  KLLDGSSHFMLTYEDREGVWMLVGDVPWVYVANRVTLLSATSSKRVDG

Arabidopsis top hitse value%identityAlignment
AT1G04100.1 indoleacetic acid-induced protein 101.2e-0861.54Show/hide
Query:  SKLLDGSSHFMLTYEDREGVWMLVGDVPWVYVANRVTLL
        SKLLDGSS +++TY+D++G WMLVGDVPW      VT L
Subjt:  SKLLDGSSHFMLTYEDREGVWMLVGDVPWVYVANRVTLL

AT1G04550.2 AUX/IAA transcriptional regulator family protein1.8e-0956.25Show/hide
Query:  KLLDGSSHFMLTYEDREGVWMLVGDVPWVYVANRVTLLSATSSKRVDG
        +LLDGSS F+LTYED+EG WMLVGDVPW    N V  L    +    G
Subjt:  KLLDGSSHFMLTYEDREGVWMLVGDVPWVYVANRVTLLSATSSKRVDG

AT2G33310.1 auxin-induced protein 138.1e-1056.25Show/hide
Query:  KLLDGSSHFMLTYEDREGVWMLVGDVPWVYVANRVTLLSATSSKRVDG
        +LLDGSS F+LTYED+EG WMLVGDVPW    N V  L    +   +G
Subjt:  KLLDGSSHFMLTYEDREGVWMLVGDVPWVYVANRVTLLSATSSKRVDG

AT2G33310.2 auxin-induced protein 138.1e-1056.25Show/hide
Query:  KLLDGSSHFMLTYEDREGVWMLVGDVPWVYVANRVTLLSATSSKRVDG
        +LLDGSS F+LTYED+EG WMLVGDVPW    N V  L    +   +G
Subjt:  KLLDGSSHFMLTYEDREGVWMLVGDVPWVYVANRVTLLSATSSKRVDG

AT2G33310.3 auxin-induced protein 138.1e-1056.25Show/hide
Query:  KLLDGSSHFMLTYEDREGVWMLVGDVPWVYVANRVTLLSATSSKRVDG
        +LLDGSS F+LTYED+EG WMLVGDVPW    N V  L    +   +G
Subjt:  KLLDGSSHFMLTYEDREGVWMLVGDVPWVYVANRVTLLSATSSKRVDG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTAAGCTTTTGGATGGATCCTCTCATTTTATGCTCACATATGAAGATAGAGAAGGAGTTTGGATGTTGGTTGGAGATGTCCCTTGGGTGTATGTTGCAAATAGGGT
TACTCTTTTGAGTGCAACGTCTTCCAAGAGGGTTGATGGTCCTCCATTGGTTTCCACTATGACCTTGAAGAAGCCTAAACTGGATGAAAGTTTTGAGGAAGCCGCTCATG
AGACTGGAAAATTGGTGGACACTACAATCCAGCACCACCAGGAATTATGA
mRNA sequenceShow/hide mRNA sequence
ATGTCTAAGCTTTTGGATGGATCCTCTCATTTTATGCTCACATATGAAGATAGAGAAGGAGTTTGGATGTTGGTTGGAGATGTCCCTTGGGTGTATGTTGCAAATAGGGT
TACTCTTTTGAGTGCAACGTCTTCCAAGAGGGTTGATGGTCCTCCATTGGTTTCCACTATGACCTTGAAGAAGCCTAAACTGGATGAAAGTTTTGAGGAAGCCGCTCATG
AGACTGGAAAATTGGTGGACACTACAATCCAGCACCACCAGGAATTATGA
Protein sequenceShow/hide protein sequence
MSKLLDGSSHFMLTYEDREGVWMLVGDVPWVYVANRVTLLSATSSKRVDGPPLVSTMTLKKPKLDESFEEAAHETGKLVDTTIQHHQEL