; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10014520 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10014520
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionRibosomal RNA small subunit methyltransferase NEP1-like
Genome locationChr02:13471660..13477219
RNA-Seq ExpressionHG10014520
SyntenyHG10014520
Gene Ontology termsGO:0070475 - rRNA base methylation (biological process)
GO:0019843 - rRNA binding (molecular function)
GO:0070037 - rRNA (pseudouridine) methyltransferase activity (molecular function)
InterPro domainsIPR005304 - Ribosomal biogenesis, methyltransferase, EMG1/NEP1
IPR029026 - tRNA (guanine-N1-)-methyltransferase, N-terminal
IPR029028 - Alpha/beta knot methyltransferases


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAB4267774.1 unnamed protein product [Prunus armeniaca]4.7e-5752.4Show/hide
Query:  KSQSSSSKLARLKQESVENLDELKNVEDVNTNASLLDVMNEKPQEPRVIFVLDNAPLHKGLVGKKWKILDSWRDQHFLLKHKKNLKDFRPENVRQPLLDI
        +SQ+ SS+   +K +  E  ++   +E    +A+L    N    + R IFV++NA L KG V K+WKILDS  D  FLLK KK+L DFRP  V + L  I
Subjt:  KSQSSSSKLARLKQESVENLDELKNVEDVNTNASLLDVMNEKPQEPRVIFVLDNAPLHKGLVGKKWKILDSWRDQHFLLKHKKNLKDFRPENVRQPLLDI

Query:  FDSRVNKAGKVGAVYVKIDDGVLFEIKPHARIPRTYNRFCGLILDLLKKRCIRAEDTNEVLFRVLNEPLSQHLPSNSRV---SNGLEKLVDIQDYVSATS
         DS++NKAG VGAVYVK D GVLFEIKPH RIPRT  RFCG+IL+LL  +CIR +DTNE+L RV+ EP+++HLP NSRV   S   EKLVDI +YV++ S
Subjt:  FDSRVNKAGKVGAVYVKIDDGVLFEIKPHARIPRTYNRFCGLILDLLKKRCIRAEDTNEVLFRVLNEPLSQHLPSNSRV---SNGLEKLVDIQDYVSATS

Query:  DDKNLIFVVSATDHKKIN-ICTDDMIS------------GMICEALEHKW
        D+ NL+FVV A  H KI+   TDD IS            G+ICE+LEHKW
Subjt:  DDKNLIFVVSATDHKKIN-ICTDDMIS------------GMICEALEHKW

KAA0032138.1 ribosomal RNA small subunit methyltransferase NEP1-like [Cucumis melo var. makuwa]7.3e-11985.98Show/hide
Query:  MPAQKRRKSQSSSSKLARLKQESVENLDELKNVEDVNTNASLLDVMNEKPQEPRVIFVLDNAPLHKGLVGKKWKILDSWRDQHFLLKHKKNLKDFRPENV
        MP QKRR S+S SSKLAR KQESVENLDELKNVEDV T +SLLD+MNEKPQE RVIFVLDNAPLHKGLVGKKWKILDSWRD  FLLKHKKNLKDF PENV
Subjt:  MPAQKRRKSQSSSSKLARLKQESVENLDELKNVEDVNTNASLLDVMNEKPQEPRVIFVLDNAPLHKGLVGKKWKILDSWRDQHFLLKHKKNLKDFRPENV

Query:  RQPLLDIFDSRVNKAGKVGAVYVKIDDGVLFEIKPHARIPRTYNRFCGLILDLLKKRCIRAEDTNEVLFRVLNEPLSQHLPSNSR---VSNGLEKLVDIQ
        RQPLLDIFDSRVNKAGKVGAVYVKIDDGVLFEIKPHARIPRTYNRFCGLILDLLKKRCIRAEDTNEVLFR+LNEPLSQHLPSNSR   VSNGLEKLVDIQ
Subjt:  RQPLLDIFDSRVNKAGKVGAVYVKIDDGVLFEIKPHARIPRTYNRFCGLILDLLKKRCIRAEDTNEVLFRVLNEPLSQHLPSNSR---VSNGLEKLVDIQ

Query:  DYVSATSDDKNLIFVVSATDHKKINICTDDMIS------------GMICEALEHKWIVEPPSHN
        +YVS T DDKN +FVVSATDHKKINIC DDMIS            GMICEALEHKWIVEP  HN
Subjt:  DYVSATSDDKNLIFVVSATDHKKINICTDDMIS------------GMICEALEHKWIVEPPSHN

TYK14383.1 ribosomal RNA small subunit methyltransferase NEP1-like [Cucumis melo var. makuwa]8.2e-7086.79Show/hide
Query:  PLLDIFDSRVNKAGKVGAVYVKIDDGVLFEIKPHARIPRTYNRFCGLILDLLKKRCIRAEDTNEVLFRVLNEPLSQHLPSNSRVSNGLEKLVDIQDYVSA
        PLLDIFDSRVNKAGKVGAVYVKIDDGVLFEIKPHARIPRTYNRFCGLILDLLKKRCIRAEDTNEVLFR+LNEPLSQHLPSNSRVSNGLEKLVDIQ+YVS 
Subjt:  PLLDIFDSRVNKAGKVGAVYVKIDDGVLFEIKPHARIPRTYNRFCGLILDLLKKRCIRAEDTNEVLFRVLNEPLSQHLPSNSRVSNGLEKLVDIQDYVSA

Query:  TSDDKNLIFVVSATDHKKINICTDDMIS------------GMICEALEHKWIVEPPSHN
        T DDKN +FVVSATDHKKINIC DDMIS            GMICEALEHKWIVEP  HN
Subjt:  TSDDKNLIFVVSATDHKKINICTDDMIS------------GMICEALEHKWIVEPPSHN

XP_008456875.1 PREDICTED: ribosomal RNA small subunit methyltransferase NEP1-like [Cucumis melo]3.1e-10186.82Show/hide
Query:  VMNEKPQEPRVIFVLDNAPLHKGLVGKKWKILDSWRDQHFLLKHKKNLKDFRPENVRQPLLDIFDSRVNKAGKVGAVYVKIDDGVLFEIKPHARIPRTYN
        +MNEKPQE RVIFVLDNAPLHKGLVGKKWKILDSWRD  FLLKHKKNLKDF PENVRQPLLDIFDSRVNKAGKVGAVYVKIDDGVLFEIKPHARIPRTYN
Subjt:  VMNEKPQEPRVIFVLDNAPLHKGLVGKKWKILDSWRDQHFLLKHKKNLKDFRPENVRQPLLDIFDSRVNKAGKVGAVYVKIDDGVLFEIKPHARIPRTYN

Query:  RFCGLILDLLKKRCIRAEDTNEVLFRVLNEPLSQHLPSNSR---VSNGLEKLVDIQDYVSATSDDKNLIFVVSATDHKKINICTDDMIS-----------
        RFCGLILDLLKKRCIRAEDTNEVLFR+LNEPLSQHLPSNSR   VSNGLEKLVDIQ+YVS T DDKN +FVVSATDHKKINIC DDMIS           
Subjt:  RFCGLILDLLKKRCIRAEDTNEVLFRVLNEPLSQHLPSNSR---VSNGLEKLVDIQDYVSATSDDKNLIFVVSATDHKKINICTDDMIS-----------

Query:  -GMICEALEHKWIVEPPSHN
         GMICEALEHKWIVEP  HN
Subjt:  -GMICEALEHKWIVEPPSHN

XP_038891816.1 ribosomal RNA small subunit methyltransferase nep-1-like [Benincasa hispida]2.4e-9392.82Show/hide
Query:  MPAQKRRKSQSSSSKLARLKQESVENLDELKNVEDVNTNASLLDVMNEKPQEPRVIFVLDNAPLHKGLVGKKWKILDSWRDQHFLLKHKKNLKDFRPENV
        M  QKRR S+SSSSKLARLKQE VENLDELKNVEDVNTN+SLLDV+NEKPQE RVIFVLDNAPLHKGLVGKKWKILDSWRDQ FLLKHKKNLKDF PENV
Subjt:  MPAQKRRKSQSSSSKLARLKQESVENLDELKNVEDVNTNASLLDVMNEKPQEPRVIFVLDNAPLHKGLVGKKWKILDSWRDQHFLLKHKKNLKDFRPENV

Query:  RQPLLDIFDSRVNKAGKVGAVYVKIDDGVLFEIKPHARIPRTYNRFCGLILDLLKKRCIRAEDTNEVLFRVLNEPLSQHLPSNSR---VSNGLEK
        RQPLLDIFDSRVNKAGKVGAVYVKIDDGVLFEIKPHARIPRTYNRFCGLILDLLKKRCIRAEDTNEVLFRVLNEPLSQHLP NSR   VSNGLEK
Subjt:  RQPLLDIFDSRVNKAGKVGAVYVKIDDGVLFEIKPHARIPRTYNRFCGLILDLLKKRCIRAEDTNEVLFRVLNEPLSQHLPSNSR---VSNGLEK

TrEMBL top hitse value%identityAlignment
A0A1S3C5G9 ribosomal RNA small subunit methyltransferase NEP1-like1.5e-10186.82Show/hide
Query:  VMNEKPQEPRVIFVLDNAPLHKGLVGKKWKILDSWRDQHFLLKHKKNLKDFRPENVRQPLLDIFDSRVNKAGKVGAVYVKIDDGVLFEIKPHARIPRTYN
        +MNEKPQE RVIFVLDNAPLHKGLVGKKWKILDSWRD  FLLKHKKNLKDF PENVRQPLLDIFDSRVNKAGKVGAVYVKIDDGVLFEIKPHARIPRTYN
Subjt:  VMNEKPQEPRVIFVLDNAPLHKGLVGKKWKILDSWRDQHFLLKHKKNLKDFRPENVRQPLLDIFDSRVNKAGKVGAVYVKIDDGVLFEIKPHARIPRTYN

Query:  RFCGLILDLLKKRCIRAEDTNEVLFRVLNEPLSQHLPSNSR---VSNGLEKLVDIQDYVSATSDDKNLIFVVSATDHKKINICTDDMIS-----------
        RFCGLILDLLKKRCIRAEDTNEVLFR+LNEPLSQHLPSNSR   VSNGLEKLVDIQ+YVS T DDKN +FVVSATDHKKINIC DDMIS           
Subjt:  RFCGLILDLLKKRCIRAEDTNEVLFRVLNEPLSQHLPSNSR---VSNGLEKLVDIQDYVSATSDDKNLIFVVSATDHKKINICTDDMIS-----------

Query:  -GMICEALEHKWIVEPPSHN
         GMICEALEHKWIVEP  HN
Subjt:  -GMICEALEHKWIVEPPSHN

A0A251RJG5 Uncharacterized protein1.1e-5651.18Show/hide
Query:  KRRKSQSSSSKLARLKQESVE-NLDELKNVEDVNTNASLLDVMNEKPQEPRVIFVLDNAPLHKGLVGKKWKILDSWRDQHFLLKHKKNLKDFRPENVRQP
        +R++ + S S+L      +V+  L+E        T   +    N    + R IFV++NA L KG V K+WKILDS  D  FLLK KK+L DFRP  V + 
Subjt:  KRRKSQSSSSKLARLKQESVE-NLDELKNVEDVNTNASLLDVMNEKPQEPRVIFVLDNAPLHKGLVGKKWKILDSWRDQHFLLKHKKNLKDFRPENVRQP

Query:  LLDIFDSRVNKAGKVGAVYVKIDDGVLFEIKPHARIPRTYNRFCGLILDLLKKRCIRAEDTNEVLFRVLNEPLSQHLPSNSRV---SNGLEKLVDIQDYV
        L  I DS++NKAG VGAVYVK D GVLFEIKPH RIPRT  RFCG+IL+LL  +CIR +DTNE+L RV+ EP+++HLP NSRV   S   EKLVDI +YV
Subjt:  LLDIFDSRVNKAGKVGAVYVKIDDGVLFEIKPHARIPRTYNRFCGLILDLLKKRCIRAEDTNEVLFRVLNEPLSQHLPSNSRV---SNGLEKLVDIQDYV

Query:  SATSDDKNLIFVVSATDHKKIN-ICTDDMIS------------GMICEALEHKW
        ++ SD+ NL+FVV A  H KI+   TDD IS            G+ICE+LEHKW
Subjt:  SATSDDKNLIFVVSATDHKKIN-ICTDDMIS------------GMICEALEHKW

A0A5A7SNC0 Ribosomal RNA small subunit methyltransferase NEP1-like3.6e-11985.98Show/hide
Query:  MPAQKRRKSQSSSSKLARLKQESVENLDELKNVEDVNTNASLLDVMNEKPQEPRVIFVLDNAPLHKGLVGKKWKILDSWRDQHFLLKHKKNLKDFRPENV
        MP QKRR S+S SSKLAR KQESVENLDELKNVEDV T +SLLD+MNEKPQE RVIFVLDNAPLHKGLVGKKWKILDSWRD  FLLKHKKNLKDF PENV
Subjt:  MPAQKRRKSQSSSSKLARLKQESVENLDELKNVEDVNTNASLLDVMNEKPQEPRVIFVLDNAPLHKGLVGKKWKILDSWRDQHFLLKHKKNLKDFRPENV

Query:  RQPLLDIFDSRVNKAGKVGAVYVKIDDGVLFEIKPHARIPRTYNRFCGLILDLLKKRCIRAEDTNEVLFRVLNEPLSQHLPSNSR---VSNGLEKLVDIQ
        RQPLLDIFDSRVNKAGKVGAVYVKIDDGVLFEIKPHARIPRTYNRFCGLILDLLKKRCIRAEDTNEVLFR+LNEPLSQHLPSNSR   VSNGLEKLVDIQ
Subjt:  RQPLLDIFDSRVNKAGKVGAVYVKIDDGVLFEIKPHARIPRTYNRFCGLILDLLKKRCIRAEDTNEVLFRVLNEPLSQHLPSNSR---VSNGLEKLVDIQ

Query:  DYVSATSDDKNLIFVVSATDHKKINICTDDMIS------------GMICEALEHKWIVEPPSHN
        +YVS T DDKN +FVVSATDHKKINIC DDMIS            GMICEALEHKWIVEP  HN
Subjt:  DYVSATSDDKNLIFVVSATDHKKINICTDDMIS------------GMICEALEHKWIVEPPSHN

A0A5D3CR92 Ribosomal RNA small subunit methyltransferase NEP1-like4.0e-7086.79Show/hide
Query:  PLLDIFDSRVNKAGKVGAVYVKIDDGVLFEIKPHARIPRTYNRFCGLILDLLKKRCIRAEDTNEVLFRVLNEPLSQHLPSNSRVSNGLEKLVDIQDYVSA
        PLLDIFDSRVNKAGKVGAVYVKIDDGVLFEIKPHARIPRTYNRFCGLILDLLKKRCIRAEDTNEVLFR+LNEPLSQHLPSNSRVSNGLEKLVDIQ+YVS 
Subjt:  PLLDIFDSRVNKAGKVGAVYVKIDDGVLFEIKPHARIPRTYNRFCGLILDLLKKRCIRAEDTNEVLFRVLNEPLSQHLPSNSRVSNGLEKLVDIQDYVSA

Query:  TSDDKNLIFVVSATDHKKINICTDDMIS------------GMICEALEHKWIVEPPSHN
        T DDKN +FVVSATDHKKINIC DDMIS            GMICEALEHKWIVEP  HN
Subjt:  TSDDKNLIFVVSATDHKKINICTDDMIS------------GMICEALEHKWIVEPPSHN

A0A6J5TWQ3 Uncharacterized protein2.3e-5752.4Show/hide
Query:  KSQSSSSKLARLKQESVENLDELKNVEDVNTNASLLDVMNEKPQEPRVIFVLDNAPLHKGLVGKKWKILDSWRDQHFLLKHKKNLKDFRPENVRQPLLDI
        +SQ+ SS+   +K +  E  ++   +E    +A+L    N    + R IFV++NA L KG V K+WKILDS  D  FLLK KK+L DFRP  V + L  I
Subjt:  KSQSSSSKLARLKQESVENLDELKNVEDVNTNASLLDVMNEKPQEPRVIFVLDNAPLHKGLVGKKWKILDSWRDQHFLLKHKKNLKDFRPENVRQPLLDI

Query:  FDSRVNKAGKVGAVYVKIDDGVLFEIKPHARIPRTYNRFCGLILDLLKKRCIRAEDTNEVLFRVLNEPLSQHLPSNSRV---SNGLEKLVDIQDYVSATS
         DS++NKAG VGAVYVK D GVLFEIKPH RIPRT  RFCG+IL+LL  +CIR +DTNE+L RV+ EP+++HLP NSRV   S   EKLVDI +YV++ S
Subjt:  FDSRVNKAGKVGAVYVKIDDGVLFEIKPHARIPRTYNRFCGLILDLLKKRCIRAEDTNEVLFRVLNEPLSQHLPSNSRV---SNGLEKLVDIQDYVSATS

Query:  DDKNLIFVVSATDHKKIN-ICTDDMIS------------GMICEALEHKW
        D+ NL+FVV A  H KI+   TDD IS            G+ICE+LEHKW
Subjt:  DDKNLIFVVSATDHKKIN-ICTDDMIS------------GMICEALEHKW

SwissProt top hitse value%identityAlignment
O35130 Ribosomal RNA small subunit methyltransferase NEP12.4e-2435.96Show/hide
Query:  RVIFVLDNAPLHKGLVGKKWKILDSWRDQHFLLKHKKNLKDFRPENVRQPLLDIFDSRVNKAGKVGAVYVKIDDGVLFEIKPHARIPRTYNRFCGLILDL
        R+I VL+ A L    VGK +++L+  R +  LLK+ ++  + RP+   Q LL + DS +N+AG +  VY+     VL E+ P  RIPRT++RFCGL++ L
Subjt:  RVIFVLDNAPLHKGLVGKKWKILDSWRDQHFLLKHKKNLKDFRPENVRQPLLDIFDSRVNKAGKVGAVYVKIDDGVLFEIKPHARIPRTYNRFCGLILDL

Query:  LKKRCIRAEDTNEVLFRVLNEPLSQHLPSNSRVSNGLEKLVDIQDYVSATSDDKNLIFVVSATDHKKINI-CTDDMIS
        L K  +RA D  + L +V+  P+S H P           + DI D          ++FVV A  H K+++  T+ M+S
Subjt:  LKKRCIRAEDTNEVLFRVLNEPLSQHLPSNSRVSNGLEKLVDIQDYVSATSDDKNLIFVVSATDHKKINI-CTDDMIS

Q06287 Ribosomal RNA small subunit methyltransferase NEP15.1e-2235.91Show/hide
Query:  RVIFVLDNAPL--HK----GLVGKKWKILDSWRDQHFLLKHKKNLKDFRPENVRQPLLDIFDSRVNKAGKVGAVYVKIDDGVLFEIKPHARIPRTYNRFC
        R+I VL  A L  HK    G  G K+ +L+    Q  L K  +++ + RP+   Q LL + DS +NKAGK+  VY++   G+L E+ P  RIPRT+ RF 
Subjt:  RVIFVLDNAPL--HK----GLVGKKWKILDSWRDQHFLLKHKKNLKDFRPENVRQPLLDIFDSRVNKAGKVGAVYVKIDDGVLFEIKPHARIPRTYNRFC

Query:  GLILDLLKKRCIRAEDTNEVLFRVLNEPLSQHLPSNSR-VSNGLE-KLVDIQDYVSATSDDKNLIFVVSATDHKKINICTD
        GL++ LL K  IR+ ++ E L +V+  P++ HLP+  R V+   +  ++ +QDY+    DD+++   V A    K N   +
Subjt:  GLILDLLKKRCIRAEDTNEVLFRVLNEPLSQHLPSNSR-VSNGLE-KLVDIQDYVSATSDDKNLIFVVSATDHKKINICTD

Q92979 Ribosomal RNA small subunit methyltransferase NEP16.0e-2334.27Show/hide
Query:  RVIFVLDNAPLHKGLVGKKWKILDSWRDQHFLLKHKKNLKDFRPENVRQPLLDIFDSRVNKAGKVGAVYVKIDDGVLFEIKPHARIPRTYNRFCGLILDL
        R+I VL+ A L    VGK +++L+  + +  LLK+ ++  + RP+   Q LL + DS +N+AG +  VY+     VL E+ P  RIPRT++RFCGL++ L
Subjt:  RVIFVLDNAPLHKGLVGKKWKILDSWRDQHFLLKHKKNLKDFRPENVRQPLLDIFDSRVNKAGKVGAVYVKIDDGVLFEIKPHARIPRTYNRFCGLILDL

Query:  LKKRCIRAEDTNEVLFRVLNEPLSQHLPSNSRVSNGLEKLVDIQDYVSATSDDKNLIFVVSATDHKKINI-CTDDMIS
        L K  +RA D  + L +V+  P+S H P           +  + D          ++FVV A  H K+++  T+ M+S
Subjt:  LKKRCIRAEDTNEVLFRVLNEPLSQHLPSNSRVSNGLEKLVDIQDYVSATSDDKNLIFVVSATDHKKINI-CTDDMIS

Q9P8P7 Ribosomal RNA small subunit methyltransferase NEP16.6e-2235.36Show/hide
Query:  RVIFVLDNAPLHK------GLVGKKWKILDSWRDQHFLLKHKKNLKDFRPENVRQPLLDIFDSRVNKAGKVGAVYVKIDDGVLFEIKPHARIPRTYNRFC
        R+I VL  A L        G  G ++ +L+    Q  L K  +++ + RP+   Q LL + DS +NKAG++  VY++   GVL E+ P  RIPRT+ RF 
Subjt:  RVIFVLDNAPLHK------GLVGKKWKILDSWRDQHFLLKHKKNLKDFRPENVRQPLLDIFDSRVNKAGKVGAVYVKIDDGVLFEIKPHARIPRTYNRFC

Query:  GLILDLLKKRCIRAEDTNEVLFRVLNEPLSQHLPSNSR-VSNGLE-KLVDIQDYVSATSDDKNLIFVVSATDHKKINICTD
        GL++ LL K  IR+E++ EVL +V+  P++ HLP+  R V+   + +L  +QDYV+   +++++   V A    K N   +
Subjt:  GLILDLLKKRCIRAEDTNEVLFRVLNEPLSQHLPSNSR-VSNGLE-KLVDIQDYVSATSDDKNLIFVVSATDHKKINICTD

Q9XX15 Ribosomal RNA small subunit methyltransferase nep-13.2e-2434.38Show/hide
Query:  NASLLDVMNEKPQEPRVIFVLDNAPLHKGLVGKKWKILDSWRDQHFLLKHKKNLKDFRPENVRQPLLDIFDSRVNKAGKVGAVYVKIDDGVLFEIKPHAR
        NA  +   N+   +  +  VL+   L    VG ++ IL S +  +FL K KK+  D+RP+ + Q LL++ DS +N+AGK+  V+ +    VL ++ P  R
Subjt:  NASLLDVMNEKPQEPRVIFVLDNAPLHKGLVGKKWKILDSWRDQHFLLKHKKNLKDFRPENVRQPLLDIFDSRVNKAGKVGAVYVKIDDGVLFEIKPHAR

Query:  IPRTYNRFCGLILDLLKKRCIRAEDTNEVLFRVLNEPLSQHLPSNSR---VSNGLEKLVDIQDYVSATSDDKNLIFVVSATDHKKINICTDD
        IPRT++RFCGL++ LL K  IRA +T + L  V+  P+S HLP  SR   +S  + +L  + + + A   D+ L+ ++      KI +  +D
Subjt:  IPRTYNRFCGLILDLLKKRCIRAEDTNEVLFRVLNEPLSQHLPSNSR---VSNGLEKLVDIQDYVSATSDDKNLIFVVSATDHKKINICTDD

Arabidopsis top hitse value%identityAlignment
AT3G57000.1 nucleolar essential protein-related4.4e-3737.22Show/hide
Query:  QKRRKSQSSSSKLARLKQESVENLDELKNVEDVNTNASLL--DVMNEKP--------QEPRVIFVLDNAPLHKGLVGKKWKILDSWRDQHFLLKHKKNLK
        ++++K++ SS K    K+ES    +E  + E+V   A+    D++   P        ++  ++FVL+ A L    VGK +++L+S    +FL K+ +N  
Subjt:  QKRRKSQSSSSKLARLKQESVENLDELKNVEDVNTNASLL--DVMNEKP--------QEPRVIFVLDNAPLHKGLVGKKWKILDSWRDQHFLLKHKKNLK

Query:  DFRPENVRQPLLDIFDSRVNKAGKVGAVYVKIDDGVLFEIKPHARIPRTYNRFCGLILDLLKKRCIRAEDTNEVLFRVLNEPLSQ-HLPSNSR---VSNG
        D+RP+   Q LL I DS VNKAG++ AVYV+ + GVLFE+KPH RIPRT+ RF G++L LL+K  I A ++ E L R +  P+ + HLP NS     S+ 
Subjt:  DFRPENVRQPLLDIFDSRVNKAGKVGAVYVKIDDGVLFEIKPHARIPRTYNRFCGLILDLLKKRCIRAEDTNEVLFRVLNEPLSQ-HLPSNSR---VSNG

Query:  LEKLVDIQDYVSAT-SDDKNLIFVVSATDHKKINI-CTDDMIS------------GMICEALEHKW
         EKLV++Q +++    DD++ +FVV A  H KI+    D+ +S              ICEAL   W
Subjt:  LEKLVDIQDYVSAT-SDDKNLIFVVSATDHKKINI-CTDDMIS------------GMICEALEHKW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTGCTCAGAAAAGGAGGAAGTCCCAAAGTTCCTCTTCAAAGTTGGCAAGGCTGAAGCAGGAGAGCGTAGAGAATTTAGATGAATTGAAAAATGTAGAAGATGTTAA
TACGAATGCCAGTTTGTTGGATGTGATGAATGAGAAGCCTCAAGAGCCTCGTGTAATTTTTGTTCTGGATAATGCTCCTTTGCACAAGGGTCTTGTTGGGAAGAAGTGGA
AGATTCTTGATTCGTGGAGAGATCAACATTTCCTTCTTAAGCATAAGAAGAATCTTAAAGACTTTAGGCCTGAAAATGTTCGTCAGCCTCTCCTTGACATTTTTGACAGC
CGAGTTAATAAAGCTGGAAAAGTAGGCGCTGTTTATGTCAAAATTGATGATGGAGTACTATTTGAAATCAAGCCACATGCTCGTATTCCAAGAACATACAATCGCTTTTG
TGGACTGATTTTGGACTTGCTAAAGAAGAGATGTATTCGTGCTGAAGATACAAACGAAGTACTTTTTCGTGTCCTCAACGAACCATTGTCTCAACATTTGCCCAGCAACT
CTCGTGTCTCTAATGGTTTGGAAAAGCTGGTTGACATACAGGATTATGTTTCTGCTACTAGTGATGATAAGAATCTCATTTTTGTGGTCAGTGCGACAGATCATAAGAAA
ATTAATATATGTACGGATGACATGATATCGGGCATGATTTGTGAAGCATTGGAGCATAAATGGATCGTTGAACCTCCTTCACATAACTGA
mRNA sequenceShow/hide mRNA sequence
ATGCCTGCTCAGAAAAGGAGGAAGTCCCAAAGTTCCTCTTCAAAGTTGGCAAGGCTGAAGCAGGAGAGCGTAGAGAATTTAGATGAATTGAAAAATGTAGAAGATGTTAA
TACGAATGCCAGTTTGTTGGATGTGATGAATGAGAAGCCTCAAGAGCCTCGTGTAATTTTTGTTCTGGATAATGCTCCTTTGCACAAGGGTCTTGTTGGGAAGAAGTGGA
AGATTCTTGATTCGTGGAGAGATCAACATTTCCTTCTTAAGCATAAGAAGAATCTTAAAGACTTTAGGCCTGAAAATGTTCGTCAGCCTCTCCTTGACATTTTTGACAGC
CGAGTTAATAAAGCTGGAAAAGTAGGCGCTGTTTATGTCAAAATTGATGATGGAGTACTATTTGAAATCAAGCCACATGCTCGTATTCCAAGAACATACAATCGCTTTTG
TGGACTGATTTTGGACTTGCTAAAGAAGAGATGTATTCGTGCTGAAGATACAAACGAAGTACTTTTTCGTGTCCTCAACGAACCATTGTCTCAACATTTGCCCAGCAACT
CTCGTGTCTCTAATGGTTTGGAAAAGCTGGTTGACATACAGGATTATGTTTCTGCTACTAGTGATGATAAGAATCTCATTTTTGTGGTCAGTGCGACAGATCATAAGAAA
ATTAATATATGTACGGATGACATGATATCGGGCATGATTTGTGAAGCATTGGAGCATAAATGGATCGTTGAACCTCCTTCACATAACTGA
Protein sequenceShow/hide protein sequence
MPAQKRRKSQSSSSKLARLKQESVENLDELKNVEDVNTNASLLDVMNEKPQEPRVIFVLDNAPLHKGLVGKKWKILDSWRDQHFLLKHKKNLKDFRPENVRQPLLDIFDS
RVNKAGKVGAVYVKIDDGVLFEIKPHARIPRTYNRFCGLILDLLKKRCIRAEDTNEVLFRVLNEPLSQHLPSNSRVSNGLEKLVDIQDYVSATSDDKNLIFVVSATDHKK
INICTDDMISGMICEALEHKWIVEPPSHN