; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10014522 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10014522
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionDExH-box ATP-dependent RNA helicase DExH5, mitochondrial-like
Genome locationChr02:13484642..13494137
RNA-Seq ExpressionHG10014522
SyntenyHG10014522
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0034595.1 DExH-box ATP-dependent RNA helicase DExH5 [Cucumis melo var. makuwa]6.4e-2956.34Show/hide
Query:  DRSTNLNVLGCYLTMLPME-----------------PILTVVARLNVRDSFLTPLKKKDVLQPVKA------IDSLR--------KVVEKNFGGYDIYWK
        D S NL VLG YLTMLPME                 PILTVVA L+VRD FLTPL+KKD  +  K+       D L         K  E+N+GGYD  WK
Subjt:  DRSTNLNVLGCYLTMLPME-----------------PILTVVARLNVRDSFLTPLKKKDVLQPVKA------IDSLR--------KVVEKNFGGYDIYWK

Query:  NFFSVQSVKAIDSLRKEFFSLLKDIGLVSGYLNTYNAWSLDE
        NF S+QS+KAIDSLRKEFFSLL+D GLV GY +TYNAWSLDE
Subjt:  NFFSVQSVKAIDSLRKEFFSLLKDIGLVSGYLNTYNAWSLDE

TYK09146.1 DExH-box ATP-dependent RNA helicase DExH5 [Cucumis melo var. makuwa]6.4e-2956.34Show/hide
Query:  DRSTNLNVLGCYLTMLPME-----------------PILTVVARLNVRDSFLTPLKKKDVLQPVKA------IDSLR--------KVVEKNFGGYDIYWK
        D S NL VLG YLTMLPME                 PILTVVA L+VRD FLTPL+KKD  +  K+       D L         K  E+N+GGYD  WK
Subjt:  DRSTNLNVLGCYLTMLPME-----------------PILTVVARLNVRDSFLTPLKKKDVLQPVKA------IDSLR--------KVVEKNFGGYDIYWK

Query:  NFFSVQSVKAIDSLRKEFFSLLKDIGLVSGYLNTYNAWSLDE
        NF S+QS+KAIDSLRKEFFSLL+D GLV GY +TYNAWSLDE
Subjt:  NFFSVQSVKAIDSLRKEFFSLLKDIGLVSGYLNTYNAWSLDE

XP_008446652.1 PREDICTED: DExH-box ATP-dependent RNA helicase DExH5, mitochondrial isoform X1 [Cucumis melo]6.4e-2956.34Show/hide
Query:  DRSTNLNVLGCYLTMLPME-----------------PILTVVARLNVRDSFLTPLKKKDVLQPVKA------IDSLR--------KVVEKNFGGYDIYWK
        D S NL VLG YLTMLPME                 PILTVVA L+VRD FLTPL+KKD  +  K+       D L         K  E+N+GGYD  WK
Subjt:  DRSTNLNVLGCYLTMLPME-----------------PILTVVARLNVRDSFLTPLKKKDVLQPVKA------IDSLR--------KVVEKNFGGYDIYWK

Query:  NFFSVQSVKAIDSLRKEFFSLLKDIGLVSGYLNTYNAWSLDE
        NF S+QS+KAIDSLRKEFFSLL+D GLV GY +TYNAWSLDE
Subjt:  NFFSVQSVKAIDSLRKEFFSLLKDIGLVSGYLNTYNAWSLDE

XP_008446653.1 PREDICTED: DExH-box ATP-dependent RNA helicase DExH5, mitochondrial isoform X2 [Cucumis melo]6.4e-2956.34Show/hide
Query:  DRSTNLNVLGCYLTMLPME-----------------PILTVVARLNVRDSFLTPLKKKDVLQPVKA------IDSLR--------KVVEKNFGGYDIYWK
        D S NL VLG YLTMLPME                 PILTVVA L+VRD FLTPL+KKD  +  K+       D L         K  E+N+GGYD  WK
Subjt:  DRSTNLNVLGCYLTMLPME-----------------PILTVVARLNVRDSFLTPLKKKDVLQPVKA------IDSLR--------KVVEKNFGGYDIYWK

Query:  NFFSVQSVKAIDSLRKEFFSLLKDIGLVSGYLNTYNAWSLDE
        NF S+QS+KAIDSLRKEFFSLL+D GLV GY +TYNAWSLDE
Subjt:  NFFSVQSVKAIDSLRKEFFSLLKDIGLVSGYLNTYNAWSLDE

XP_038892223.1 DExH-box ATP-dependent RNA helicase DExH5, mitochondrial [Benincasa hispida]7.5e-3058.45Show/hide
Query:  DRSTNLNVLGCYLTMLPME-----------------PILTVVARLNVRDSFLTPLKKKDVLQPVKA------IDSLR--------KVVEKNFGGYDIYWK
        D S NL VLG YLTMLPME                 PILTVVA L+VRD FLTPL+KKDV +  K+       D L         K  E+NFGGYD  WK
Subjt:  DRSTNLNVLGCYLTMLPME-----------------PILTVVARLNVRDSFLTPLKKKDVLQPVKA------IDSLR--------KVVEKNFGGYDIYWK

Query:  NFFSVQSVKAIDSLRKEFFSLLKDIGLVSGYLNTYNAWSLDE
        NF SVQS+KAIDSLRKEFFSLL+D GLV GY +TYNAWSLDE
Subjt:  NFFSVQSVKAIDSLRKEFFSLLKDIGLVSGYLNTYNAWSLDE

TrEMBL top hitse value%identityAlignment
A0A0A0KWI1 Uncharacterized protein5.3e-2955.63Show/hide
Query:  DRSTNLNVLGCYLTMLPME-----------------PILTVVARLNVRDSFLTPLKKKDVLQPVKA------IDSLR--------KVVEKNFGGYDIYWK
        D S NL VLG YLTMLPME                 PI+TVVA L+VRD FLTPL+KKD  +  K+       D L         K  E+N+GGYD  WK
Subjt:  DRSTNLNVLGCYLTMLPME-----------------PILTVVARLNVRDSFLTPLKKKDVLQPVKA------IDSLR--------KVVEKNFGGYDIYWK

Query:  NFFSVQSVKAIDSLRKEFFSLLKDIGLVSGYLNTYNAWSLDE
        NF S+QS+KAIDSLRKEFFSLL+D GLV GY +TYNAWSLDE
Subjt:  NFFSVQSVKAIDSLRKEFFSLLKDIGLVSGYLNTYNAWSLDE

A0A1S3BF36 DExH-box ATP-dependent RNA helicase DExH5, mitochondrial isoform X13.1e-2956.34Show/hide
Query:  DRSTNLNVLGCYLTMLPME-----------------PILTVVARLNVRDSFLTPLKKKDVLQPVKA------IDSLR--------KVVEKNFGGYDIYWK
        D S NL VLG YLTMLPME                 PILTVVA L+VRD FLTPL+KKD  +  K+       D L         K  E+N+GGYD  WK
Subjt:  DRSTNLNVLGCYLTMLPME-----------------PILTVVARLNVRDSFLTPLKKKDVLQPVKA------IDSLR--------KVVEKNFGGYDIYWK

Query:  NFFSVQSVKAIDSLRKEFFSLLKDIGLVSGYLNTYNAWSLDE
        NF S+QS+KAIDSLRKEFFSLL+D GLV GY +TYNAWSLDE
Subjt:  NFFSVQSVKAIDSLRKEFFSLLKDIGLVSGYLNTYNAWSLDE

A0A1S3BFL6 DExH-box ATP-dependent RNA helicase DExH5, mitochondrial isoform X23.1e-2956.34Show/hide
Query:  DRSTNLNVLGCYLTMLPME-----------------PILTVVARLNVRDSFLTPLKKKDVLQPVKA------IDSLR--------KVVEKNFGGYDIYWK
        D S NL VLG YLTMLPME                 PILTVVA L+VRD FLTPL+KKD  +  K+       D L         K  E+N+GGYD  WK
Subjt:  DRSTNLNVLGCYLTMLPME-----------------PILTVVARLNVRDSFLTPLKKKDVLQPVKA------IDSLR--------KVVEKNFGGYDIYWK

Query:  NFFSVQSVKAIDSLRKEFFSLLKDIGLVSGYLNTYNAWSLDE
        NF S+QS+KAIDSLRKEFFSLL+D GLV GY +TYNAWSLDE
Subjt:  NFFSVQSVKAIDSLRKEFFSLLKDIGLVSGYLNTYNAWSLDE

A0A5A7SZF7 DExH-box ATP-dependent RNA helicase DExH53.1e-2956.34Show/hide
Query:  DRSTNLNVLGCYLTMLPME-----------------PILTVVARLNVRDSFLTPLKKKDVLQPVKA------IDSLR--------KVVEKNFGGYDIYWK
        D S NL VLG YLTMLPME                 PILTVVA L+VRD FLTPL+KKD  +  K+       D L         K  E+N+GGYD  WK
Subjt:  DRSTNLNVLGCYLTMLPME-----------------PILTVVARLNVRDSFLTPLKKKDVLQPVKA------IDSLR--------KVVEKNFGGYDIYWK

Query:  NFFSVQSVKAIDSLRKEFFSLLKDIGLVSGYLNTYNAWSLDE
        NF S+QS+KAIDSLRKEFFSLL+D GLV GY +TYNAWSLDE
Subjt:  NFFSVQSVKAIDSLRKEFFSLLKDIGLVSGYLNTYNAWSLDE

A0A5D3CFK3 DExH-box ATP-dependent RNA helicase DExH53.1e-2956.34Show/hide
Query:  DRSTNLNVLGCYLTMLPME-----------------PILTVVARLNVRDSFLTPLKKKDVLQPVKA------IDSLR--------KVVEKNFGGYDIYWK
        D S NL VLG YLTMLPME                 PILTVVA L+VRD FLTPL+KKD  +  K+       D L         K  E+N+GGYD  WK
Subjt:  DRSTNLNVLGCYLTMLPME-----------------PILTVVARLNVRDSFLTPLKKKDVLQPVKA------IDSLR--------KVVEKNFGGYDIYWK

Query:  NFFSVQSVKAIDSLRKEFFSLLKDIGLVSGYLNTYNAWSLDE
        NF S+QS+KAIDSLRKEFFSLL+D GLV GY +TYNAWSLDE
Subjt:  NFFSVQSVKAIDSLRKEFFSLLKDIGLVSGYLNTYNAWSLDE

SwissProt top hitse value%identityAlignment
F4HYJ7 DExH-box ATP-dependent RNA helicase DExH31.0e-1338.46Show/hide
Query:  VQNQVVMLQ--EHQDRSTNLNVLGCYLTMLPME-----------------PILTVVARLNVRDSFLTPLKKKDVLQPVKAIDSLR---------------
        VQN V  L+     D   NL  LG  L+MLP+E                 P++TVVA L+VRD FL P  KKD+ +  ++  S R               
Subjt:  VQNQVVMLQ--EHQDRSTNLNVLGCYLTMLPME-----------------PILTVVARLNVRDSFLTPLKKKDVLQPVKAIDSLR---------------

Query:  KVVEKNFGGYDIYWKNFFSVQSVKAIDSLRKEFFSLLKDIGLV
        K  E+   GYD  WKNF S Q++KA+DS+RK+FF+LLK+  L+
Subjt:  KVVEKNFGGYDIYWKNFFSVQSVKAIDSLRKEFFSLLKDIGLV

F4ILR7 DExH-box ATP-dependent RNA helicase DExH16.7e-0532.11Show/hide
Query:  MEPILTVVARLNVRDSFLTPLKKKDVLQPVK---AIDSLRKVVE--KNFGGY----------DIYWKNFFSVQSVKAIDSLRKEFFSLLKDIGLV-SGYL
        + P LT+ A L  R  F+ PL +K+     K   A DS    +   K + GY          D  W+NF S  +++ ++ +R +F  LL DIG V     
Subjt:  MEPILTVVARLNVRDSFLTPLKKKDVLQPVK---AIDSLRKVVE--KNFGGY----------DIYWKNFFSVQSVKAIDSLRKEFFSLLKDIGLV-SGYL

Query:  NTYNAWSLD
        N YN +S D
Subjt:  NTYNAWSLD

F4IM84 DExH-box ATP-dependent RNA helicase DExH5, mitochondrial6.9e-1845.38Show/hide
Query:  DRSTNLNVLGCYLTMLPME-----------------PILTVVARLNVRDSFLTPLKKKDVLQPVKA------IDSLR--------KVVEKNFGGYDIYWK
        D + +L  LG YL+ LPME                 PILTV A L+VRD FLTP  KKD+ +  K+       D L         K  E+    YD  WK
Subjt:  DRSTNLNVLGCYLTMLPME-----------------PILTVVARLNVRDSFLTPLKKKDVLQPVKA------IDSLR--------KVVEKNFGGYDIYWK

Query:  NFFSVQSVKAIDSLRKEFFSLLKDIGLVSG
        NF S+QS++AIDSLRKEFFSLLKD GL+ G
Subjt:  NFFSVQSVKAIDSLRKEFFSLLKDIGLVSG

Arabidopsis top hitse value%identityAlignment
AT1G48650.1 DEA(D/H)-box RNA helicase family protein7.3e-1538.46Show/hide
Query:  VQNQVVMLQ--EHQDRSTNLNVLGCYLTMLPME-----------------PILTVVARLNVRDSFLTPLKKKDVLQPVKAIDSLR---------------
        VQN V  L+     D   NL  LG  L+MLP+E                 P++TVVA L+VRD FL P  KKD+ +  ++  S R               
Subjt:  VQNQVVMLQ--EHQDRSTNLNVLGCYLTMLPME-----------------PILTVVARLNVRDSFLTPLKKKDVLQPVKAIDSLR---------------

Query:  KVVEKNFGGYDIYWKNFFSVQSVKAIDSLRKEFFSLLKDIGLV
        K  E+   GYD  WKNF S Q++KA+DS+RK+FF+LLK+  L+
Subjt:  KVVEKNFGGYDIYWKNFFSVQSVKAIDSLRKEFFSLLKDIGLV

AT1G48650.2 DEA(D/H)-box RNA helicase family protein7.3e-1538.46Show/hide
Query:  VQNQVVMLQ--EHQDRSTNLNVLGCYLTMLPME-----------------PILTVVARLNVRDSFLTPLKKKDVLQPVKAIDSLR---------------
        VQN V  L+     D   NL  LG  L+MLP+E                 P++TVVA L+VRD FL P  KKD+ +  ++  S R               
Subjt:  VQNQVVMLQ--EHQDRSTNLNVLGCYLTMLPME-----------------PILTVVARLNVRDSFLTPLKKKDVLQPVKAIDSLR---------------

Query:  KVVEKNFGGYDIYWKNFFSVQSVKAIDSLRKEFFSLLKDIGLV
        K  E+   GYD  WKNF S Q++KA+DS+RK+FF+LLK+  L+
Subjt:  KVVEKNFGGYDIYWKNFFSVQSVKAIDSLRKEFFSLLKDIGLV

AT2G01130.1 DEA(D/H)-box RNA helicase family protein4.9e-1945.38Show/hide
Query:  DRSTNLNVLGCYLTMLPME-----------------PILTVVARLNVRDSFLTPLKKKDVLQPVKA------IDSLR--------KVVEKNFGGYDIYWK
        D + +L  LG YL+ LPME                 PILTV A L+VRD FLTP  KKD+ +  K+       D L         K  E+    YD  WK
Subjt:  DRSTNLNVLGCYLTMLPME-----------------PILTVVARLNVRDSFLTPLKKKDVLQPVKA------IDSLR--------KVVEKNFGGYDIYWK

Query:  NFFSVQSVKAIDSLRKEFFSLLKDIGLVSG
        NF S+QS++AIDSLRKEFFSLLKD GL+ G
Subjt:  NFFSVQSVKAIDSLRKEFFSLLKDIGLVSG

AT2G35920.1 RNA helicase family protein4.7e-0632.11Show/hide
Query:  MEPILTVVARLNVRDSFLTPLKKKDVLQPVK---AIDSLRKVVE--KNFGGY----------DIYWKNFFSVQSVKAIDSLRKEFFSLLKDIGLV-SGYL
        + P LT+ A L  R  F+ PL +K+     K   A DS    +   K + GY          D  W+NF S  +++ ++ +R +F  LL DIG V     
Subjt:  MEPILTVVARLNVRDSFLTPLKKKDVLQPVK---AIDSLRKVVE--KNFGGY----------DIYWKNFFSVQSVKAIDSLRKEFFSLLKDIGLV-SGYL

Query:  NTYNAWSLD
        N YN +S D
Subjt:  NTYNAWSLD

AT5G04895.1 DEA(D/H)-box RNA helicase family protein2.9e-1134.29Show/hide
Query:  DRSTNLNVLGCYLTMLPM-----------------EPILTVVARLNVRDSFLTPLKKKDVLQPVKAIDSLR---------------KVVEKNFGGYDIYW
        D   NL  LG  L++LP+                 +PILT+V+ L+VRD FL P  KKD+    K   S +               K  E+    Y+  W
Subjt:  DRSTNLNVLGCYLTMLPM-----------------EPILTVVARLNVRDSFLTPLKKKDVLQPVKAIDSLR---------------KVVEKNFGGYDIYW

Query:  KNFFSVQSVKAIDSLRKEFFSLLKDIGLVSGYLNTYNAWS
        +NF S Q+++AI SLRK+F  +LK+ GLV   L   N  S
Subjt:  KNFFSVQSVKAIDSLRKEFFSLLKDIGLVSGYLNTYNAWS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCGAAAAAAACCCCAAAAATACCAAACCAACCCTCTCGGATGCGGAAGCATCTTTCTCCCCACCAGCGGTCGAGCAGCGGCTTAAGGCATTAGAAAATGTTGTGAG
TGGAATAAACAACACAATTTCTGGGATACAACAAGCCATTGAGACACTTACAGCCGAAATTGGAAGAGCTTTTGCAGTCCACAACAAAGGAAAAGGCAAAGAAATTGACT
ACGACAATCAAGAAAATTCAAGAATGCAAGAAGTTGCAAGAAGTCCACCTAGAAGACAAATTTCAGAATTTCAACCAACAAACAATTACCAAAATCATCCGGTAGGTATT
ATTCCTCAACAACAAAGACCGACTCCACACAATATGATGGGATATGATTTGGACTCTTCAAACGATAAAGACCTTTTCTTCAAAATGGTTGGGTTTAATTTTGAAACATC
AAAAGAAGAAGAAGTTGGTTGGCGAGGTTTTTCTCGATTTTCATATGAAAATCATGAGCAACAACACCAATTCAAGAATGTCAAAGAATGGATTCAAGAATCGTTTCAAG
ATCAAATGGGCATTCAATCAAATGTTCAAGAACATGTTGTTGTCCTTCAAGAACATCAAGGCAACCCATATCGAGTCCAAAATCAAGTGGTCATGCTGCAAGAACATCAA
GATAGGAGTACAAATCTTAATGTTTTAGGTTGTTATTTGACTATGCTCCCAATGGAACCAATTTTGACCGTTGTTGCCCGTCTTAATGTGAGAGACTCTTTTCTAACACC
ACTTAAGAAGAAGGATGTTTTACAACCAGTGAAGGCTATTGATTCACTAAGAAAAGTTGTTGAGAAGAACTTTGGTGGATATGACATCTATTGGAAGAACTTTTTTTCTG
TACAATCAGTGAAAGCTATTGATTCACTAAGGAAGGAGTTCTTTTCTTTGCTTAAAGATATTGGCTTGGTCAGTGGGTATTTGAACACCTACAACGCTTGGAGTCTTGAT
GAACTTGATGAAAACTTTATGTCTTGGAGTGTTTTTCATAATATTTTTGTTCAAGATGTAGGAGATTTATATGATGAAAATATTGCAAATGAAATTGGGAAGAAACTTGA
AGATTTGATTAGAAAAATGTATGATGAGTATAAAAATGTTGATGAGGAGGAGGATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGCGAAAAAAACCCCAAAAATACCAAACCAACCCTCTCGGATGCGGAAGCATCTTTCTCCCCACCAGCGGTCGAGCAGCGGCTTAAGGCATTAGAAAATGTTGTGAG
TGGAATAAACAACACAATTTCTGGGATACAACAAGCCATTGAGACACTTACAGCCGAAATTGGAAGAGCTTTTGCAGTCCACAACAAAGGAAAAGGCAAAGAAATTGACT
ACGACAATCAAGAAAATTCAAGAATGCAAGAAGTTGCAAGAAGTCCACCTAGAAGACAAATTTCAGAATTTCAACCAACAAACAATTACCAAAATCATCCGGTAGGTATT
ATTCCTCAACAACAAAGACCGACTCCACACAATATGATGGGATATGATTTGGACTCTTCAAACGATAAAGACCTTTTCTTCAAAATGGTTGGGTTTAATTTTGAAACATC
AAAAGAAGAAGAAGTTGGTTGGCGAGGTTTTTCTCGATTTTCATATGAAAATCATGAGCAACAACACCAATTCAAGAATGTCAAAGAATGGATTCAAGAATCGTTTCAAG
ATCAAATGGGCATTCAATCAAATGTTCAAGAACATGTTGTTGTCCTTCAAGAACATCAAGGCAACCCATATCGAGTCCAAAATCAAGTGGTCATGCTGCAAGAACATCAA
GATAGGAGTACAAATCTTAATGTTTTAGGTTGTTATTTGACTATGCTCCCAATGGAACCAATTTTGACCGTTGTTGCCCGTCTTAATGTGAGAGACTCTTTTCTAACACC
ACTTAAGAAGAAGGATGTTTTACAACCAGTGAAGGCTATTGATTCACTAAGAAAAGTTGTTGAGAAGAACTTTGGTGGATATGACATCTATTGGAAGAACTTTTTTTCTG
TACAATCAGTGAAAGCTATTGATTCACTAAGGAAGGAGTTCTTTTCTTTGCTTAAAGATATTGGCTTGGTCAGTGGGTATTTGAACACCTACAACGCTTGGAGTCTTGAT
GAACTTGATGAAAACTTTATGTCTTGGAGTGTTTTTCATAATATTTTTGTTCAAGATGTAGGAGATTTATATGATGAAAATATTGCAAATGAAATTGGGAAGAAACTTGA
AGATTTGATTAGAAAAATGTATGATGAGTATAAAAATGTTGATGAGGAGGAGGATTGA
Protein sequenceShow/hide protein sequence
MGEKNPKNTKPTLSDAEASFSPPAVEQRLKALENVVSGINNTISGIQQAIETLTAEIGRAFAVHNKGKGKEIDYDNQENSRMQEVARSPPRRQISEFQPTNNYQNHPVGI
IPQQQRPTPHNMMGYDLDSSNDKDLFFKMVGFNFETSKEEEVGWRGFSRFSYENHEQQHQFKNVKEWIQESFQDQMGIQSNVQEHVVVLQEHQGNPYRVQNQVVMLQEHQ
DRSTNLNVLGCYLTMLPMEPILTVVARLNVRDSFLTPLKKKDVLQPVKAIDSLRKVVEKNFGGYDIYWKNFFSVQSVKAIDSLRKEFFSLLKDIGLVSGYLNTYNAWSLD
ELDENFMSWSVFHNIFVQDVGDLYDENIANEIGKKLEDLIRKMYDEYKNVDEEED