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HG10014530 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10014530
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionCCHC-type domain-containing protein
Genome locationChr02:13626120..13626878
RNA-Seq ExpressionHG10014530
SyntenyHG10014530
Gene Ontology termsNA
InterPro domainsIPR025836 - Zinc knuckle CX2CX4HX4C
IPR040256 - Uncharacterized protein At4g02000-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TXG61207.1 hypothetical protein EZV62_012570 [Acer yangbiense]1.5e-2440.27Show/hide
Query:  PWVFDNSLLALEDPKANVKLSKLSFEKVAFWIRLLDIPLGFQNRFMAKWLGD---NFLEVDCDQDNFCWGESLQIKILVDISKPLRRGIWIDLSGDQESQ
        PW FD SL+ LE P+    +S+LSF+KV FW+++ DIP+   NR  AKWL +    F+E+  +    CWG+ L++K+L+DISKPL+R + + L   +   
Subjt:  PWVFDNSLLALEDPKANVKLSKLSFEKVAFWIRLLDIPLGFQNRFMAKWLGD---NFLEVDCDQDNFCWGESLQIKILVDISKPLRRGIWIDLSGDQESQ

Query:  WINVIYKRLPDFCYGCGRIGLVIKYC-----KSETRHGSPNKGKDRDWE
         + + Y+RLP+FCY C R+G  I  C     K E   G  +  K+R  E
Subjt:  WINVIYKRLPDFCYGCGRIGLVIKYC-----KSETRHGSPNKGKDRDWE

TXG70163.1 hypothetical protein EZV62_005098 [Acer yangbiense]3.3e-2439.73Show/hide
Query:  DPWVFDNSLLALEDPKANVKLSKLSFEKVAFWIRLLDIPLGFQNRFMAKWLGDNF---LEVDCDQDNFCWGESLQIKILVDISKPLRRGIWIDLSGDQES
        +PW F NSL+ALE P     +  L F++ AFW+++ DIP+   NR  AKWL +     +E+  D    CWG+ +++K+ +DISKPL+R + + L      
Subjt:  DPWVFDNSLLALEDPKANVKLSKLSFEKVAFWIRLLDIPLGFQNRFMAKWLGDNF---LEVDCDQDNFCWGESLQIKILVDISKPLRRGIWIDLSGDQES

Query:  QWINVIYKRLPDFCYGCGRIGLVIKYCK-SETRHGSPNKGKDRDWE
          + + Y+RLPDFC+ CG+IG V+K C   E R G  + G   D E
Subjt:  QWINVIYKRLPDFCYGCGRIGLVIKYCK-SETRHGSPNKGKDRDWE

TXG73180.1 hypothetical protein EZV62_001759 [Acer yangbiense]3.0e-2536.89Show/hide
Query:  PWVFDNSLLALEDPKANVKLSKLSFEKVAFWIRLLDIPLGFQNRFMAKWLGDNF---LEVDCDQDNFCWGESLQIKILVDISKPLRRGIWIDLSGDQESQ
        PW F  SL+ LE P     +SKL F K  FW+++ DIP+   NR  AKWL +     +E+  D    CWG  +++K+L+DIS+PL+R + + LS   E  
Subjt:  PWVFDNSLLALEDPKANVKLSKLSFEKVAFWIRLLDIPLGFQNRFMAKWLGDNF---LEVDCDQDNFCWGESLQIKILVDISKPLRRGIWIDLSGDQESQ

Query:  WINVIYKRLPDFCYGCGRIGLVIKYCKSE-----TRHGSPNKGKDRDW-ESP---NPKTAFDLNIGPSNLGTNRGSEATPVIFPDLPQSHN---SSTKSS
         + + Y+RLPDFCY CGR+G V+K C  E        GSP   K   W ++P     K+ F   I  S+   ++  E    +  D  +SHN    S  S 
Subjt:  WINVIYKRLPDFCYGCGRIGLVIKYCKSE-----TRHGSPNKGKDRDW-ESP---NPKTAFDLNIGPSNLGTNRGSEATPVIFPDLPQSHN---SSTKSS

Query:  KGECLS
         GE  S
Subjt:  KGECLS

XP_022156185.1 uncharacterized protein LOC111023135 [Momordica charantia]4.0e-3048.8Show/hide
Query:  VIRLDPWVFDNSLLALEDPKANVKLSKLSFEKVAFWIRLLDIPLGFQNRFMAKWLGD---NFLEVDCDQDNFCWGESLQIKILVDISKPLRRGIWIDLSG
        V++  PW FD +L+ L+ P ++  +S+L F +VAFWI L D+P+ + N+ MA  LG+   NF++VDC++  F WG SL+I++L+DI+KPLRRGI I++ G
Subjt:  VIRLDPWVFDNSLLALEDPKANVKLSKLSFEKVAFWIRLLDIPLGFQNRFMAKWLGD---NFLEVDCDQDNFCWGESLQIKILVDISKPLRRGIWIDLSG

Query:  DQESQWINVIYKRLPDFCYGCGRIG
             WI + Y+RLPDFCY CG IG
Subjt:  DQESQWINVIYKRLPDFCYGCGRIG

XP_022158377.1 uncharacterized protein LOC111024874 [Momordica charantia]2.5e-2445.08Show/hide
Query:  VIRLDPWVFDNSLLALEDPKANVKLSKLSFEKVAFWIRLLDIPLGFQNRFMAKWLGD---NFLEVDCDQDNFCWGESLQIKILVDISKPLRRGIWIDLSG
        + +  PW FD +L+ +  P A +  S+L F K+  W+R  D+PLG   R MA  LG+    F E DCD  N  WG +L++++++DISKPLRRGI ++L G
Subjt:  VIRLDPWVFDNSLLALEDPKANVKLSKLSFEKVAFWIRLLDIPLGFQNRFMAKWLGD---NFLEVDCDQDNFCWGESLQIKILVDISKPLRRGIWIDLSG

Query:  DQESQWINVIYKRLPDFCYGCG
             WI + Y+RLPDFCY CG
Subjt:  DQESQWINVIYKRLPDFCYGCG

TrEMBL top hitse value%identityAlignment
A0A5C7HVP8 Uncharacterized protein7.2e-2540.27Show/hide
Query:  PWVFDNSLLALEDPKANVKLSKLSFEKVAFWIRLLDIPLGFQNRFMAKWLGD---NFLEVDCDQDNFCWGESLQIKILVDISKPLRRGIWIDLSGDQESQ
        PW FD SL+ LE P+    +S+LSF+KV FW+++ DIP+   NR  AKWL +    F+E+  +    CWG+ L++K+L+DISKPL+R + + L   +   
Subjt:  PWVFDNSLLALEDPKANVKLSKLSFEKVAFWIRLLDIPLGFQNRFMAKWLGD---NFLEVDCDQDNFCWGESLQIKILVDISKPLRRGIWIDLSGDQESQ

Query:  WINVIYKRLPDFCYGCGRIGLVIKYC-----KSETRHGSPNKGKDRDWE
         + + Y+RLP+FCY C R+G  I  C     K E   G  +  K+R  E
Subjt:  WINVIYKRLPDFCYGCGRIGLVIKYC-----KSETRHGSPNKGKDRDWE

A0A5C7IV30 CCHC-type domain-containing protein1.4e-2536.89Show/hide
Query:  PWVFDNSLLALEDPKANVKLSKLSFEKVAFWIRLLDIPLGFQNRFMAKWLGDNF---LEVDCDQDNFCWGESLQIKILVDISKPLRRGIWIDLSGDQESQ
        PW F  SL+ LE P     +SKL F K  FW+++ DIP+   NR  AKWL +     +E+  D    CWG  +++K+L+DIS+PL+R + + LS   E  
Subjt:  PWVFDNSLLALEDPKANVKLSKLSFEKVAFWIRLLDIPLGFQNRFMAKWLGDNF---LEVDCDQDNFCWGESLQIKILVDISKPLRRGIWIDLSGDQESQ

Query:  WINVIYKRLPDFCYGCGRIGLVIKYCKSE-----TRHGSPNKGKDRDW-ESP---NPKTAFDLNIGPSNLGTNRGSEATPVIFPDLPQSHN---SSTKSS
         + + Y+RLPDFCY CGR+G V+K C  E        GSP   K   W ++P     K+ F   I  S+   ++  E    +  D  +SHN    S  S 
Subjt:  WINVIYKRLPDFCYGCGRIGLVIKYCKSE-----TRHGSPNKGKDRDW-ESP---NPKTAFDLNIGPSNLGTNRGSEATPVIFPDLPQSHN---SSTKSS

Query:  KGECLS
         GE  S
Subjt:  KGECLS

A0A5C7IWT1 CCHC-type domain-containing protein1.6e-2439.49Show/hide
Query:  PWVFDNSLLALEDPKANVKLSKLSFEKVAFWIRLLDIPLGFQNRFMAKWLGDNFLEV--DCDQDNFCWGESLQIKILVDISKPLRRGIWIDLSGDQESQW
        PW F NSL+ALE P  +  +SKL F K  FWI++ ++P+   NR +A+WL D   EV     +   CWG+ +++K+ +DI KPL+R +        E   
Subjt:  PWVFDNSLLALEDPKANVKLSKLSFEKVAFWIRLLDIPLGFQNRFMAKWLGDNFLEV--DCDQDNFCWGESLQIKILVDISKPLRRGIWIDLSGDQESQW

Query:  INVIYKRLPDFCYGCGRIGLVIKYCKSE-----------TRHGS------PNKGKDR
        + + Y+RLPDFC+ CGRIG  IK C  E           T++GS      P KGK R
Subjt:  INVIYKRLPDFCYGCGRIGLVIKYCKSE-----------TRHGS------PNKGKDR

A0A6J1DU55 uncharacterized protein LOC1110231351.9e-3048.8Show/hide
Query:  VIRLDPWVFDNSLLALEDPKANVKLSKLSFEKVAFWIRLLDIPLGFQNRFMAKWLGD---NFLEVDCDQDNFCWGESLQIKILVDISKPLRRGIWIDLSG
        V++  PW FD +L+ L+ P ++  +S+L F +VAFWI L D+P+ + N+ MA  LG+   NF++VDC++  F WG SL+I++L+DI+KPLRRGI I++ G
Subjt:  VIRLDPWVFDNSLLALEDPKANVKLSKLSFEKVAFWIRLLDIPLGFQNRFMAKWLGD---NFLEVDCDQDNFCWGESLQIKILVDISKPLRRGIWIDLSG

Query:  DQESQWINVIYKRLPDFCYGCGRIG
             WI + Y+RLPDFCY CG IG
Subjt:  DQESQWINVIYKRLPDFCYGCGRIG

A0A6J1DX30 uncharacterized protein LOC1110248741.2e-2445.08Show/hide
Query:  VIRLDPWVFDNSLLALEDPKANVKLSKLSFEKVAFWIRLLDIPLGFQNRFMAKWLGD---NFLEVDCDQDNFCWGESLQIKILVDISKPLRRGIWIDLSG
        + +  PW FD +L+ +  P A +  S+L F K+  W+R  D+PLG   R MA  LG+    F E DCD  N  WG +L++++++DISKPLRRGI ++L G
Subjt:  VIRLDPWVFDNSLLALEDPKANVKLSKLSFEKVAFWIRLLDIPLGFQNRFMAKWLGD---NFLEVDCDQDNFCWGESLQIKILVDISKPLRRGIWIDLSG

Query:  DQESQWINVIYKRLPDFCYGCG
             WI + Y+RLPDFCY CG
Subjt:  DQESQWINVIYKRLPDFCYGCG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTATTAGACTCGATCCTTGGGTTTTCGATAATTCTCTATTGGCTTTGGAAGACCCAAAAGCTAATGTGAAATTATCTAAACTTTCGTTCGAAAAAGTGGCTTTTTG
GATCAGACTATTAGACATACCACTAGGCTTCCAAAACAGATTCATGGCCAAATGGCTGGGAGACAATTTCTTAGAAGTGGACTGCGATCAGGACAATTTCTGTTGGGGGG
AGAGCCTACAAATTAAGATTTTAGTGGATATTTCAAAACCTTTGAGAAGAGGAATATGGATTGATCTAAGTGGGGATCAAGAAAGTCAATGGATCAATGTCATATATAAG
AGGCTACCTGATTTCTGTTATGGCTGCGGCAGAATTGGTCTTGTGATAAAATATTGCAAATCTGAGACAAGACATGGAAGCCCCAATAAGGGAAAAGATAGGGATTGGGA
GTCACCAAATCCTAAAACTGCCTTTGATCTAAATATCGGCCCCTCTAATCTCGGAACCAATAGAGGATCTGAGGCTACCCCTGTGATATTCCCTGATCTTCCTCAATCTC
ACAATTCATCTACTAAGTCATCTAAGGGGGAATGTCTATCTCTCATCACTGATCACAGAGGAATCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTTATTAGACTCGATCCTTGGGTTTTCGATAATTCTCTATTGGCTTTGGAAGACCCAAAAGCTAATGTGAAATTATCTAAACTTTCGTTCGAAAAAGTGGCTTTTTG
GATCAGACTATTAGACATACCACTAGGCTTCCAAAACAGATTCATGGCCAAATGGCTGGGAGACAATTTCTTAGAAGTGGACTGCGATCAGGACAATTTCTGTTGGGGGG
AGAGCCTACAAATTAAGATTTTAGTGGATATTTCAAAACCTTTGAGAAGAGGAATATGGATTGATCTAAGTGGGGATCAAGAAAGTCAATGGATCAATGTCATATATAAG
AGGCTACCTGATTTCTGTTATGGCTGCGGCAGAATTGGTCTTGTGATAAAATATTGCAAATCTGAGACAAGACATGGAAGCCCCAATAAGGGAAAAGATAGGGATTGGGA
GTCACCAAATCCTAAAACTGCCTTTGATCTAAATATCGGCCCCTCTAATCTCGGAACCAATAGAGGATCTGAGGCTACCCCTGTGATATTCCCTGATCTTCCTCAATCTC
ACAATTCATCTACTAAGTCATCTAAGGGGGAATGTCTATCTCTCATCACTGATCACAGAGGAATCTAG
Protein sequenceShow/hide protein sequence
MVIRLDPWVFDNSLLALEDPKANVKLSKLSFEKVAFWIRLLDIPLGFQNRFMAKWLGDNFLEVDCDQDNFCWGESLQIKILVDISKPLRRGIWIDLSGDQESQWINVIYK
RLPDFCYGCGRIGLVIKYCKSETRHGSPNKGKDRDWESPNPKTAFDLNIGPSNLGTNRGSEATPVIFPDLPQSHNSSTKSSKGECLSLITDHRGI