; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10014578 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10014578
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionPlant transposase
Genome locationChr02:15072012..15080486
RNA-Seq ExpressionHG10014578
SyntenyHG10014578
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032201.1 Plant transposase [Cucumis melo var. makuwa]9.9e-2268.54Show/hide
Query:  SDYAKFKERIEQNRVEMSHSGSIVEDAISRVLGPDRDHVRGLGFGVTRLKLSTSSQNDKTIASFERKCNNLTSDVDELKSVVTTLLRDK
        S  A   +RIEQNRV  + S SI++DAISRVLGPD+ +VRGLGFGVT  K+STS Q DKTI S E+KC+NLTSDVDELKSVV +LL+DK
Subjt:  SDYAKFKERIEQNRVEMSHSGSIVEDAISRVLGPDRDHVRGLGFGVTRLKLSTSSQNDKTIASFERKCNNLTSDVDELKSVVTTLLRDK

KAA0042856.1 Plant transposase [Cucumis melo var. makuwa]4.9e-2167.42Show/hide
Query:  SDYAKFKERIEQNRVEMSHSGSIVEDAISRVLGPDRDHVRGLGFGVTRLKLSTSSQNDKTIASFERKCNNLTSDVDELKSVVTTLLRDK
        S  A   +RIEQNR   + S SI++DAISRVLGPD+ +VRGLGFGVT  K+STS Q DKTI S E+KC+NLTSDVDELKSVV +LL+DK
Subjt:  SDYAKFKERIEQNRVEMSHSGSIVEDAISRVLGPDRDHVRGLGFGVTRLKLSTSSQNDKTIASFERKCNNLTSDVDELKSVVTTLLRDK

KAA0052811.1 transposase [Cucumis melo var. makuwa]6.4e-2171.95Show/hide
Query:  ERIEQNRVEMSHSGSIVEDAISRVLGPDRDHVRGLGFGVTRLKLSTSSQNDKTIASFERKCNNLTSDVDELKSVVTTLLRDK
        ERIEQNRV  + S SI++DAISRVLGPD+ +V+GLGF VT  K+STS QNDKTI S E KC+NLTSDVDELKSVV +LL+DK
Subjt:  ERIEQNRVEMSHSGSIVEDAISRVLGPDRDHVRGLGFGVTRLKLSTSSQNDKTIASFERKCNNLTSDVDELKSVVTTLLRDK

KAA0057491.1 Plant transposase [Cucumis melo var. makuwa]6.4e-2167.42Show/hide
Query:  SDYAKFKERIEQNRVEMSHSGSIVEDAISRVLGPDRDHVRGLGFGVTRLKLSTSSQNDKTIASFERKCNNLTSDVDELKSVVTTLLRDK
        S  A   +RIEQNRV  + S SI++DAISRVLGPD+ +VRGLGFGVT  K+STS Q DKTI S E+KC+NLTSDVDELKSVV + L+DK
Subjt:  SDYAKFKERIEQNRVEMSHSGSIVEDAISRVLGPDRDHVRGLGFGVTRLKLSTSSQNDKTIASFERKCNNLTSDVDELKSVVTTLLRDK

XP_038900033.1 uncharacterized protein LOC120087197 [Benincasa hispida]2.4e-2371.08Show/hide
Query:  KERIEQNRVEMSHSGSIVEDAISRVLGPDRDHVRGLGFGVTRLKLSTSSQNDKTIASFERKCNNLTSDVDELKSVVTTLLRDK
        KERIE+NRV  S S SI++DAISRV G + DHVRGLGFGVT  KLSTS+Q D+TIAS ERKCNNLT+DVDELK ++ +L+RDK
Subjt:  KERIEQNRVEMSHSGSIVEDAISRVLGPDRDHVRGLGFGVTRLKLSTSSQNDKTIASFERKCNNLTSDVDELKSVVTTLLRDK

TrEMBL top hitse value%identityAlignment
A0A5A7SRN7 Plant transposase4.8e-2268.54Show/hide
Query:  SDYAKFKERIEQNRVEMSHSGSIVEDAISRVLGPDRDHVRGLGFGVTRLKLSTSSQNDKTIASFERKCNNLTSDVDELKSVVTTLLRDK
        S  A   +RIEQNRV  + S SI++DAISRVLGPD+ +VRGLGFGVT  K+STS Q DKTI S E+KC+NLTSDVDELKSVV +LL+DK
Subjt:  SDYAKFKERIEQNRVEMSHSGSIVEDAISRVLGPDRDHVRGLGFGVTRLKLSTSSQNDKTIASFERKCNNLTSDVDELKSVVTTLLRDK

A0A5A7TLJ2 Plant transposase2.4e-2167.42Show/hide
Query:  SDYAKFKERIEQNRVEMSHSGSIVEDAISRVLGPDRDHVRGLGFGVTRLKLSTSSQNDKTIASFERKCNNLTSDVDELKSVVTTLLRDK
        S  A   +RIEQNR   + S SI++DAISRVLGPD+ +VRGLGFGVT  K+STS Q DKTI S E+KC+NLTSDVDELKSVV +LL+DK
Subjt:  SDYAKFKERIEQNRVEMSHSGSIVEDAISRVLGPDRDHVRGLGFGVTRLKLSTSSQNDKTIASFERKCNNLTSDVDELKSVVTTLLRDK

A0A5A7UH01 Transposase3.1e-2171.95Show/hide
Query:  ERIEQNRVEMSHSGSIVEDAISRVLGPDRDHVRGLGFGVTRLKLSTSSQNDKTIASFERKCNNLTSDVDELKSVVTTLLRDK
        ERIEQNRV  + S SI++DAISRVLGPD+ +V+GLGF VT  K+STS QNDKTI S E KC+NLTSDVDELKSVV +LL+DK
Subjt:  ERIEQNRVEMSHSGSIVEDAISRVLGPDRDHVRGLGFGVTRLKLSTSSQNDKTIASFERKCNNLTSDVDELKSVVTTLLRDK

A0A5A7UVF2 Plant transposase3.1e-2167.42Show/hide
Query:  SDYAKFKERIEQNRVEMSHSGSIVEDAISRVLGPDRDHVRGLGFGVTRLKLSTSSQNDKTIASFERKCNNLTSDVDELKSVVTTLLRDK
        S  A   +RIEQNRV  + S SI++DAISRVLGPD+ +VRGLGFGVT  K+STS Q DKTI S E+KC+NLTSDVDELKSVV + L+DK
Subjt:  SDYAKFKERIEQNRVEMSHSGSIVEDAISRVLGPDRDHVRGLGFGVTRLKLSTSSQNDKTIASFERKCNNLTSDVDELKSVVTTLLRDK

A0A5D3DYN2 Plant transposase5.3e-2160Show/hide
Query:  RDSSPVTTPPAMSYSDYAKFKE--RIEQNRVEMSHSGSIVEDAISRVLGPDRDHVRGLGFGVTRLKLSTSSQNDKTIASFERKCNNLTSDVDELKSVVTT
        +D      P   S   YA+  E  RIEQNRV  + S SI++DAISRVLG D+ +VRGLGFGVT  K+STS   DKTI S E+KC+NLTSDVDELKSVV +
Subjt:  RDSSPVTTPPAMSYSDYAKFKE--RIEQNRVEMSHSGSIVEDAISRVLGPDRDHVRGLGFGVTRLKLSTSSQNDKTIASFERKCNNLTSDVDELKSVVTT

Query:  LLRDK
        LL+DK
Subjt:  LLRDK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACTTAACCAATATGGCCAGTGAAGACGAGGAGGACGAGGACCAAGCTGCTCGTTCATCAAAGAATGTAAAAAGAAATATAGCAGATGAACTAGATAGTGTCATGAA
GGCTAGTCTAGAGAGAGAGGTTATGGAAACATCTCCTTTTTCTAACCCACTTCACGACAACAATAGGGATTCTTCACCTGTTACTACTCCACCTGCAATGTCATATTCAG
ATTATGCAAAATTTAAGGAGCGTATTGAACAAAATCGTGTGGAAATGTCTCATTCGGGTAGTATAGTTGAAGATGCAATTAGTAGAGTTTTAGGTCCCGATCGTGACCAT
GTACGAGGTTTAGGATTTGGAGTGACTAGGTTGAAGTTGTCTACATCAAGTCAGAACGATAAAACTATTGCATCTTTTGAAAGAAAGTGCAACAACTTAACATCAGATGT
GGATGAGCTGAAAAGTGTGGTAACTACCTTATTAAGAGACAAGGTAGCGAACGGTTTCCAGGAGCTTGACCTACCCTCCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGACTTAACCAATATGGCCAGTGAAGACGAGGAGGACGAGGACCAAGCTGCTCGTTCATCAAAGAATGTAAAAAGAAATATAGCAGATGAACTAGATAGTGTCATGAA
GGCTAGTCTAGAGAGAGAGGTTATGGAAACATCTCCTTTTTCTAACCCACTTCACGACAACAATAGGGATTCTTCACCTGTTACTACTCCACCTGCAATGTCATATTCAG
ATTATGCAAAATTTAAGGAGCGTATTGAACAAAATCGTGTGGAAATGTCTCATTCGGGTAGTATAGTTGAAGATGCAATTAGTAGAGTTTTAGGTCCCGATCGTGACCAT
GTACGAGGTTTAGGATTTGGAGTGACTAGGTTGAAGTTGTCTACATCAAGTCAGAACGATAAAACTATTGCATCTTTTGAAAGAAAGTGCAACAACTTAACATCAGATGT
GGATGAGCTGAAAAGTGTGGTAACTACCTTATTAAGAGACAAGGTAGCGAACGGTTTCCAGGAGCTTGACCTACCCTCCTGA
Protein sequenceShow/hide protein sequence
MDLTNMASEDEEDEDQAARSSKNVKRNIADELDSVMKASLEREVMETSPFSNPLHDNNRDSSPVTTPPAMSYSDYAKFKERIEQNRVEMSHSGSIVEDAISRVLGPDRDH
VRGLGFGVTRLKLSTSSQNDKTIASFERKCNNLTSDVDELKSVVTTLLRDKVANGFQELDLPS