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HG10014642 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10014642
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionSWIM-type domain-containing protein
Genome locationChr02:17079579..17081605
RNA-Seq ExpressionHG10014642
SyntenyHG10014642
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF7140119.1 hypothetical protein RHSIM_Rhsim06G0115000 [Rhododendron simsii]1.1e-1543.56Show/hide
Query:  KKPLKKFVDGYYLKESLVKAYLFFLKPVNGQNLWPTSIYDPIQPPIIRRPPGRPRRQRKRDVDETSPSKSFRRSGPTIRCSRCKEIRHNSRTCKGLVAKR
        K+P+  +   Y+  E+  + Y   + P NGQNLW  + Y PI PP +RRP GRPR+QR+++ DE       RRSG T+ C +C    HN RTCKG+V   
Subjt:  KKPLKKFVDGYYLKESLVKAYLFFLKPVNGQNLWPTSIYDPIQPPIIRRPPGRPRRQRKRDVDETSPSKSFRRSGPTIRCSRCKEIRHNSRTCKGLVAKR

Query:  K
        K
Subjt:  K

KAF7143453.1 hypothetical protein RHSIM_Rhsim05G0009400 [Rhododendron simsii]4.9e-1643.56Show/hide
Query:  KKPLKKFVDGYYLKESLVKAYLFFLKPVNGQNLWPTSIYDPIQPPIIRRPPGRPRRQRKRDVDETSPSKSFRRSGPTIRCSRCKEIRHNSRTCKGLVAKR
        K+P+  +   Y++ E+  + Y   + P NGQNLW  + Y PI PP +RRP GRPR+QR+++ DE       RRSG T+ C +C    HN RTCKG+V   
Subjt:  KKPLKKFVDGYYLKESLVKAYLFFLKPVNGQNLWPTSIYDPIQPPIIRRPPGRPRRQRKRDVDETSPSKSFRRSGPTIRCSRCKEIRHNSRTCKGLVAKR

Query:  K
        K
Subjt:  K

KAF7840310.1 hypothetical protein G2W53_002608 [Senna tora]1.3e-1638.52Show/hide
Query:  FVDGYYLKESLVKAYLFFLKPVNGQNLWPTSIYDPIQPPIIRRPPGRPRRQRKRDVDETSPSKSFRRSGPTIRCSRCKEIRHNSRTCKGLVAKRKKQTSG
        FV  YY KE+ ++ Y  ++KP NG  +WP +  DP+ PP ++RPPGRP++QRK++ +ETS   + +R    +RC++C+ + HN RTCKG  +K+ K +  
Subjt:  FVDGYYLKESLVKAYLFFLKPVNGQNLWPTSIYDPIQPPIIRRPPGRPRRQRKRDVDETSPSKSFRRSGPTIRCSRCKEIRHNSRTCKGLVAKRKKQTSG

Query:  GTTFMGFMIPNMVYLLILDLHN
        G          M     L  HN
Subjt:  GTTFMGFMIPNMVYLLILDLHN

KAF8388042.1 hypothetical protein HHK36_026708 [Tetracentron sinense]7.9e-1439.42Show/hide
Query:  LKKFVDGYYLKESLVKAYLFFLKPVNGQNLWPTSIYDPIQPPIIRRPPGRPRRQRKRDVDETSPSKSFRRSGPTIRCSRCKEIRHNSRTCKGLVAKRKKQ
        L+++ D YY K + ++AY   + P++ +++WP   ++ ++PP IRR PGRP++ R+R++DE +P    RRS  TIRC  CK+  HN RTC+    K K  
Subjt:  LKKFVDGYYLKESLVKAYLFFLKPVNGQNLWPTSIYDPIQPPIIRRPPGRPRRQRKRDVDETSPSKSFRRSGPTIRCSRCKEIRHNSRTCKGLVAKRKKQ

Query:  TSGG
        ++ G
Subjt:  TSGG

XP_027187702.1 uncharacterized protein LOC113785461 [Cicer arietinum]7.9e-1439.81Show/hide
Query:  KKFVDGYYLKESLVKAYLFFLKPVNGQNLWPTSIYDPIQPPIIRRPPGRPRRQRKRDVDETSPSKSFRRSGPTIRCSRCKEIRHNSRTCKGLVAKRKKQT
        + +V  YY K + +  Y + + P NG  LW  S  DPI PPI+RR PGRP+++R +  DE+  S    R   T++C  C ++ HN+RTCKG  A  ++  
Subjt:  KKFVDGYYLKESLVKAYLFFLKPVNGQNLWPTSIYDPIQPPIIRRPPGRPRRQRKRDVDETSPSKSFRRSGPTIRCSRCKEIRHNSRTCKGLVAKRKKQT

Query:  SGG
         GG
Subjt:  SGG

TrEMBL top hitse value%identityAlignment
A0A3Q7XS19 uncharacterized protein LOC1137866903.8e-1439.81Show/hide
Query:  KKFVDGYYLKESLVKAYLFFLKPVNGQNLWPTSIYDPIQPPIIRRPPGRPRRQRKRDVDETSPSKSFRRSGPTIRCSRCKEIRHNSRTCKGLVAKRKKQT
        + +V  YY K + +  Y + + P NG  LW  S  DPI PPI+RR PGRP+++R +  DE+  S    R   T++C  C ++ HN+RTCKG  A  ++  
Subjt:  KKFVDGYYLKESLVKAYLFFLKPVNGQNLWPTSIYDPIQPPIIRRPPGRPRRQRKRDVDETSPSKSFRRSGPTIRCSRCKEIRHNSRTCKGLVAKRKKQT

Query:  SGG
         GG
Subjt:  SGG

A0A3Q7XTY5 uncharacterized protein LOC1137871543.8e-1439.81Show/hide
Query:  KKFVDGYYLKESLVKAYLFFLKPVNGQNLWPTSIYDPIQPPIIRRPPGRPRRQRKRDVDETSPSKSFRRSGPTIRCSRCKEIRHNSRTCKGLVAKRKKQT
        + +V  YY K + +  Y + + P NG  LW  S  DPI PPI+RR PGRP+++R +  DE+  S    R   T++C  C ++ HN+RTCKG  A  ++  
Subjt:  KKFVDGYYLKESLVKAYLFFLKPVNGQNLWPTSIYDPIQPPIIRRPPGRPRRQRKRDVDETSPSKSFRRSGPTIRCSRCKEIRHNSRTCKGLVAKRKKQT

Query:  SGG
         GG
Subjt:  SGG

A0A3Q7Y7C1 uncharacterized protein LOC1015111203.8e-1439.81Show/hide
Query:  KKFVDGYYLKESLVKAYLFFLKPVNGQNLWPTSIYDPIQPPIIRRPPGRPRRQRKRDVDETSPSKSFRRSGPTIRCSRCKEIRHNSRTCKGLVAKRKKQT
        + +V  YY K + +  Y + + P NG  LW  S  DPI PPI+RR PGRP+++R +  DE+  S    R   T++C  C ++ HN+RTCKG  A  ++  
Subjt:  KKFVDGYYLKESLVKAYLFFLKPVNGQNLWPTSIYDPIQPPIIRRPPGRPRRQRKRDVDETSPSKSFRRSGPTIRCSRCKEIRHNSRTCKGLVAKRKKQT

Query:  SGG
         GG
Subjt:  SGG

A0A3Q7Y884 uncharacterized protein LOC1137854613.8e-1439.81Show/hide
Query:  KKFVDGYYLKESLVKAYLFFLKPVNGQNLWPTSIYDPIQPPIIRRPPGRPRRQRKRDVDETSPSKSFRRSGPTIRCSRCKEIRHNSRTCKGLVAKRKKQT
        + +V  YY K + +  Y + + P NG  LW  S  DPI PPI+RR PGRP+++R +  DE+  S    R   T++C  C ++ HN+RTCKG  A  ++  
Subjt:  KKFVDGYYLKESLVKAYLFFLKPVNGQNLWPTSIYDPIQPPIIRRPPGRPRRQRKRDVDETSPSKSFRRSGPTIRCSRCKEIRHNSRTCKGLVAKRKKQT

Query:  SGG
         GG
Subjt:  SGG

A0A3Q7YH69 uncharacterized protein LOC1137880953.8e-1439.81Show/hide
Query:  KKFVDGYYLKESLVKAYLFFLKPVNGQNLWPTSIYDPIQPPIIRRPPGRPRRQRKRDVDETSPSKSFRRSGPTIRCSRCKEIRHNSRTCKGLVAKRKKQT
        + +V  YY K + +  Y + + P NG  LW  S  DPI PPI+RR PGRP+++R +  DE+  S    R   T++C  C ++ HN+RTCKG  A  ++  
Subjt:  KKFVDGYYLKESLVKAYLFFLKPVNGQNLWPTSIYDPIQPPIIRRPPGRPRRQRKRDVDETSPSKSFRRSGPTIRCSRCKEIRHNSRTCKGLVAKRKKQT

Query:  SGG
         GG
Subjt:  SGG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAAAGCCACTGAAAAAGTTTGTGGATGGCTATTACCTTAAAGAATCACTTGTGAAAGCATATTTATTCTTTCTAAAACCAGTTAATGGACAAAACTTGTGGCCTAC
GTCAATTTATGATCCGATACAACCTCCTATTATACGAAGACCGCCAGGGAGACCTAGACGACAAAGAAAGAGGGATGTAGATGAAACCTCCCCTTCAAAATCATTTCGAC
GATCTGGACCTACCATTCGATGTAGTAGATGTAAAGAGATAAGACATAATTCTAGAACATGTAAAGGGCTAGTGGCTAAAAGGAAGAAACAAACTAGTGGAGGAACCACT
TTCATGGGATTCATGATCCCAAACATGGTGTATCTCCTCATCTTGGATCTGCACAATCTGGATCTTCTCAACTTCAATGTTCACATTTTGAAGTCACAGTCCCAAACGCG
TGAAAAGAAAGGCATTTCAACGCATGATTCCTTAGTGTATTCTCCTACTATGCGGCAACTTCAGCGCAACCATGCGGCGAGAACTTTATCAACGCATAGCCAGCCAATCA
TGACAGCTGGGGGAGATCCTTTGCACCAGAAACCGTTAGACAGAGGCGGAACACGCGATCAAAAAAGTCAGAGCCAAACGCGTTGTGGTCCCACCTGCACAAAAGGTGGA
AAGTACCATAAGGGCGCCTATAAAAGCAGAGGAGACGACGACAATTAG
mRNA sequenceShow/hide mRNA sequence
ATGAAAAAGCCACTGAAAAAGTTTGTGGATGGCTATTACCTTAAAGAATCACTTGTGAAAGCATATTTATTCTTTCTAAAACCAGTTAATGGACAAAACTTGTGGCCTAC
GTCAATTTATGATCCGATACAACCTCCTATTATACGAAGACCGCCAGGGAGACCTAGACGACAAAGAAAGAGGGATGTAGATGAAACCTCCCCTTCAAAATCATTTCGAC
GATCTGGACCTACCATTCGATGTAGTAGATGTAAAGAGATAAGACATAATTCTAGAACATGTAAAGGGCTAGTGGCTAAAAGGAAGAAACAAACTAGTGGAGGAACCACT
TTCATGGGATTCATGATCCCAAACATGGTGTATCTCCTCATCTTGGATCTGCACAATCTGGATCTTCTCAACTTCAATGTTCACATTTTGAAGTCACAGTCCCAAACGCG
TGAAAAGAAAGGCATTTCAACGCATGATTCCTTAGTGTATTCTCCTACTATGCGGCAACTTCAGCGCAACCATGCGGCGAGAACTTTATCAACGCATAGCCAGCCAATCA
TGACAGCTGGGGGAGATCCTTTGCACCAGAAACCGTTAGACAGAGGCGGAACACGCGATCAAAAAAGTCAGAGCCAAACGCGTTGTGGTCCCACCTGCACAAAAGGTGGA
AAGTACCATAAGGGCGCCTATAAAAGCAGAGGAGACGACGACAATTAG
Protein sequenceShow/hide protein sequence
MKKPLKKFVDGYYLKESLVKAYLFFLKPVNGQNLWPTSIYDPIQPPIIRRPPGRPRRQRKRDVDETSPSKSFRRSGPTIRCSRCKEIRHNSRTCKGLVAKRKKQTSGGTT
FMGFMIPNMVYLLILDLHNLDLLNFNVHILKSQSQTREKKGISTHDSLVYSPTMRQLQRNHAARTLSTHSQPIMTAGGDPLHQKPLDRGGTRDQKSQSQTRCGPTCTKGG
KYHKGAYKSRGDDDN