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HG10014643 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10014643
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionS-protein homolog
Genome locationChr02:17115261..17115743
RNA-Seq ExpressionHG10014643
SyntenyHG10014643
Gene Ontology termsNA
InterPro domainsIPR010264 - Plant self-incompatibility S1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8648167.1 hypothetical protein Csa_018435 [Cucumis sativus]1.3e-5770.51Show/hide
Query:  RLMLLLVLLLLTSLNTSTAKEKKFPKNKNKKPKLPDPNDPIVSFQKFRVEIHNDLHMYLLDSHCYSKDNDLGLHVLFPDEQQNWSFKGNWDDTTDFHCRL
        RL LLLV+LLL  L TS AK+K   KNK+  PKL  PN+P+V F++F VEIHNDL M++LDSHCYSKD+DLGLH+LFPDE+Q+WSFKGNW  TT FHCRL
Subjt:  RLMLLLVLLLLTSLNTSTAKEKKFPKNKNKKPKLPDPNDPIVSFQKFRVEIHNDLHMYLLDSHCYSKDNDLGLHVLFPDEQQNWSFKGNWDDTTDFHCRL

Query:  EWEVGCLEFDSFISNPDFVINNCCNKTCIWSARQDGVYLNNADDKEIFFDYWEMLR
        EWEVG LEFDSF S PDFV N C N+TCIWSARQDGVYLNNA  +++F++YWEM+R
Subjt:  EWEVGCLEFDSFISNPDFVINNCCNKTCIWSARQDGVYLNNADDKEIFFDYWEMLR

KAE8648169.1 hypothetical protein Csa_018483, partial [Cucumis sativus]4.4e-4080Show/hide
Query:  MTLQRLM-LLLVLLLLTSLNTSTAKEKKFPKNKNKKPKLPDPNDPIVSFQKFRVEIHNDLHMYLLDSHCYSKDNDLGLHVLFPDEQQNWSFKGNWDDTTD
        M  QRLM LLLVLLLLTS N S AK+KK  K+K +KP LPDPN+PIVSF+KFRVEIHNDL+MYLLDS CYSKD++ GLHVLFPDEQQNWSFKGNWDDTT 
Subjt:  MTLQRLM-LLLVLLLLTSLNTSTAKEKKFPKNKNKKPKLPDPNDPIVSFQKFRVEIHNDLHMYLLDSHCYSKDNDLGLHVLFPDEQQNWSFKGNWDDTTD

Query:  FHCRLEWEVG
        FHCRLEWE+G
Subjt:  FHCRLEWEVG

KAE8648173.1 hypothetical protein Csa_018428 [Cucumis sativus]2.7e-4279.13Show/hide
Query:  MTLQRLM-LLLVLLLLTSLNTSTAKEKKFPKNKNKKPKLPDPNDPIVSFQKFRVEIHNDLHMYLLDSHCYSKDNDLGLHVLFPDEQQNWSFKGNWDDTTD
        M  QRLM LLLVLLLLTS N S AK+KK  K+K +KP LPDPN+PIVSF+KFRVEIHNDL+MYLLDS CYSKD++ GLHVLFPDEQQNWSFKGNWDDTT 
Subjt:  MTLQRLM-LLLVLLLLTSLNTSTAKEKKFPKNKNKKPKLPDPNDPIVSFQKFRVEIHNDLHMYLLDSHCYSKDNDLGLHVLFPDEQQNWSFKGNWDDTTD

Query:  FHCRLEWEVGCLEFD
        FHCRLEWE+GCL+ D
Subjt:  FHCRLEWEVGCLEFD

XP_008453055.1 PREDICTED: uncharacterized protein LOC103493877 [Cucumis melo]3.3e-4055.73Show/hide
Query:  KNKNKKPKLPDPNDPIVSFQKFRVEIHNDLHMYLLDSHCYSKDNDLGLHVLFPDEQQNWSFKGNWDDTTDFHCRLEWEVGCLEFDSFISNPDFVINNCCN
        K++   P+LP P++P+V+F KF + I+N+L MYLLDSHCYSKD+DLG  VL+P+++Q+WSF+GNW  TT+FHC+LEWE G LEFD+F ++  F+ N C  
Subjt:  KNKNKKPKLPDPNDPIVSFQKFRVEIHNDLHMYLLDSHCYSKDNDLGLHVLFPDEQQNWSFKGNWDDTTDFHCRLEWEVGCLEFDSFISNPDFVINNCCN

Query:  KTCIWSARQDGVYLNNADDKEIFFDYWEMLR
         +C WSARQDGVYL N + + +F   WEM+R
Subjt:  KTCIWSARQDGVYLNNADDKEIFFDYWEMLR

XP_022933678.1 S-protein homolog 2-like [Cucurbita moschata]2.0e-4859.15Show/hide
Query:  MTLQRLMLLLVLLLLT----SLNTSTAKEKKFPKNKNKKPKLPDPNDPIVSFQKFRVEIHNDLHMYLLDSHCYSKDNDLGLHVLFPDEQQNWSFKGNWDD
        M ++R MLLLVL+L+     S+ T++    K PK K  KPK   PN+P  +F++F VEIHNDL M++LD+HC SKD+DLGLH+LFPDE+Q+WSF  NW  
Subjt:  MTLQRLMLLLVLLLLT----SLNTSTAKEKKFPKNKNKKPKLPDPNDPIVSFQKFRVEIHNDLHMYLLDSHCYSKDNDLGLHVLFPDEQQNWSFKGNWDD

Query:  TTDFHCRLEWEVGCLEFDSFISNPD-FVINNCCNKTCIWSARQDGVYLNNADDKEIFFDYWEML
        TT+FHCRLEW+ G LEFD+F SN D  +I+ C N TCIWSARQDGVYLNN DD  +F++YW+ML
Subjt:  TTDFHCRLEWEVGCLEFDSFISNPD-FVINNCCNKTCIWSARQDGVYLNNADDKEIFFDYWEML

TrEMBL top hitse value%identityAlignment
A0A0A0KIQ4 S-protein homolog9.5e-4977.86Show/hide
Query:  MTLQRLM-LLLVLLLLTSLNTSTAKEKKFPKNKNKKPKLPDPNDPIVSFQKFRVEIHNDLHMYLLDSHCYSKDNDLGLHVLFPDEQQNWSFKGNWDDTTD
        M  QRLM LLLVLLLLTS N S AK+KK  K+K +KP LPDPN+PIVSF+KFRVEIHNDL+MYLLDS CYSKD++ GLHVLFPDEQQNWSFKGNWDDTT 
Subjt:  MTLQRLM-LLLVLLLLTSLNTSTAKEKKFPKNKNKKPKLPDPNDPIVSFQKFRVEIHNDLHMYLLDSHCYSKDNDLGLHVLFPDEQQNWSFKGNWDDTTD

Query:  FHCRLEWEVGCLEFDSFISNPDFVINNCCNK
        FHCRLEWE+G LEFDSF S+P FV + CCNK
Subjt:  FHCRLEWEVGCLEFDSFISNPDFVINNCCNK

A0A0A0KL79 S-protein homolog2.6e-5471.85Show/hide
Query:  KKFPKNKNKKPKLPDPNDPIVSFQKFRVEIHNDLHMYLLDSHCYSKDNDLGLHVLFPDEQQNWSFKGNWDDTTDFHCRLEWEVGCLEFDSFISNPDFVIN
        KK  KNK+  PKL  PN+P+V F++F VEIHNDL M++LDSHCYSKD+DLGLH+LFPDE+Q+WSFKGNW  TT FHCRLEWEVG LEFDSF S PDFV N
Subjt:  KKFPKNKNKKPKLPDPNDPIVSFQKFRVEIHNDLHMYLLDSHCYSKDNDLGLHVLFPDEQQNWSFKGNWDDTTDFHCRLEWEVGCLEFDSFISNPDFVIN

Query:  NCCNKTCIWSARQDGVYLNNADDKEIFFDYWEMLR
         C N+TCIWSARQDGVYLNNA  +++F++YWEM+R
Subjt:  NCCNKTCIWSARQDGVYLNNADDKEIFFDYWEMLR

A0A1S3BUQ9 S-protein homolog1.6e-4055.73Show/hide
Query:  KNKNKKPKLPDPNDPIVSFQKFRVEIHNDLHMYLLDSHCYSKDNDLGLHVLFPDEQQNWSFKGNWDDTTDFHCRLEWEVGCLEFDSFISNPDFVINNCCN
        K++   P+LP P++P+V+F KF + I+N+L MYLLDSHCYSKD+DLG  VL+P+++Q+WSF+GNW  TT+FHC+LEWE G LEFD+F ++  F+ N C  
Subjt:  KNKNKKPKLPDPNDPIVSFQKFRVEIHNDLHMYLLDSHCYSKDNDLGLHVLFPDEQQNWSFKGNWDDTTDFHCRLEWEVGCLEFDSFISNPDFVINNCCN

Query:  KTCIWSARQDGVYLNNADDKEIFFDYWEMLR
         +C WSARQDGVYL N + + +F   WEM+R
Subjt:  KTCIWSARQDGVYLNNADDKEIFFDYWEMLR

A0A6J1F5H5 S-protein homolog9.5e-4959.15Show/hide
Query:  MTLQRLMLLLVLLLLT----SLNTSTAKEKKFPKNKNKKPKLPDPNDPIVSFQKFRVEIHNDLHMYLLDSHCYSKDNDLGLHVLFPDEQQNWSFKGNWDD
        M ++R MLLLVL+L+     S+ T++    K PK K  KPK   PN+P  +F++F VEIHNDL M++LD+HC SKD+DLGLH+LFPDE+Q+WSF  NW  
Subjt:  MTLQRLMLLLVLLLLT----SLNTSTAKEKKFPKNKNKKPKLPDPNDPIVSFQKFRVEIHNDLHMYLLDSHCYSKDNDLGLHVLFPDEQQNWSFKGNWDD

Query:  TTDFHCRLEWEVGCLEFDSFISNPD-FVINNCCNKTCIWSARQDGVYLNNADDKEIFFDYWEML
        TT+FHCRLEW+ G LEFD+F SN D  +I+ C N TCIWSARQDGVYLNN DD  +F++YW+ML
Subjt:  TTDFHCRLEWEVGCLEFDSFISNPD-FVINNCCNKTCIWSARQDGVYLNNADDKEIFFDYWEML

A0A6J1FMU2 S-protein homolog1.1e-3648.73Show/hide
Query:  LQRLMLLLVLLL-LTSLNTSTAKEKKFPKNKNKKPKLPDPNDPIVSFQKFRVEIHNDLHMYLLDSHCYSKDNDLGLHVLFPDEQQNWSFKGNWDDTTDFH
        ++RL LLL+LLL   SL  S A +KK        P+ PDPN P ++ +KF V I N L MYLLDSHC SKD+DLG+ V++PD++Q WSF+GNW  +T+FH
Subjt:  LQRLMLLLVLLL-LTSLNTSTAKEKKFPKNKNKKPKLPDPNDPIVSFQKFRVEIHNDLHMYLLDSHCYSKDNDLGLHVLFPDEQQNWSFKGNWDDTTDFH

Query:  CRLEWEVGCLEFDSFISNPDFVINNCCNKTCIWSARQDGVYLNNADDKEIFFDYWEML
        C+LEW  G +EFD+F  + +FV + C + +C+W+A+QDG+YL + + + +F D+WE++
Subjt:  CRLEWEVGCLEFDSFISNPDFVINNCCNKTCIWSARQDGVYLNNADDKEIFFDYWEML

SwissProt top hitse value%identityAlignment
B3H7A6 S-protein homolog 191.9e-0636.96Show/hide
Query:  VEIHNDLHMYL-LDSHCYSKDNDLGLHVLFPDEQQNWSFK---GNWDDTTDFHCRLEWEVGCLEFDSFISNPDFVINNCCNKTCIWSARQDG
        V++ ND+   + L  HC SK+ DLG   L  D  Q+W F+   G W   T F C  EWE     FD F+ + D      C   C+WS R  G
Subjt:  VEIHNDLHMYL-LDSHCYSKDNDLGLHVLFPDEQQNWSFK---GNWDDTTDFHCRLEWEVGCLEFDSFISNPDFVINNCCNKTCIWSARQDG

F4JLQ5 S-protein homolog 21.0e-0728.85Show/hide
Query:  MLLLVLLLLTSLNTSTAKEKKFPKNKNKKPKLPDPNDP-----IVSFQKFRVEIHNDL-HMYLLDSHCYSKDNDLGLHVLFPDEQQNWSFKGNWDDTTDF
        + +L++ + T L+ +           + K  +P PNDP     +    K  VEI+NDL +   L  HC SKD+DLG   L P E  ++SF   +   T +
Subjt:  MLLLVLLLLTSLNTSTAKEKKFPKNKNKKPKLPDPNDP-----IVSFQKFRVEIHNDL-HMYLLDSHCYSKDNDLGLHVLFPDEQQNWSFKGNWDDTTDF

Query:  HCRLEWEVGCLEFDSFISNPDFVINNCC-NKTCIWSARQDGVYLNNADDKEIFFDY
         C   W      FD +  + D   +N C +  C+W  R++G    N + K+    Y
Subjt:  HCRLEWEVGCLEFDSFISNPDFVINNCC-NKTCIWSARQDGVYLNNADDKEIFFDY

F4JLS0 S-protein homolog 11.1e-0632.26Show/hide
Query:  HCYSKDNDLGLHVLFPDEQQNWSFKGNWDDTTDFHCRLEWEVGCLEFDSFISNPDFVINNCCNKTCIWSARQDGVYL-NNADDKEIFFDYWEM
        HC SK++DLG   L    + +W+F  N   +T F C +  + G +  + F  +   + + C  K CIW+A+ DG+YL N+A  +++    WE+
Subjt:  HCYSKDNDLGLHVLFPDEQQNWSFKGNWDDTTDFHCRLEWEVGCLEFDSFISNPDFVINNCCNKTCIWSARQDGVYL-NNADDKEIFFDYWEM

P0DN92 S-protein homolog 243.5e-0835.24Show/hide
Query:  RVEIHNDLHMYLLDSHCYSKDNDLGLHVLFPDEQQNWSFKGNWDDTTDFHCRL-EWEVGCLEFDSFISNPDFVINNCCNKTCIWSARQDGVYLNNADDKE
        RV I ND + YLL  HC S+D+DLG H+L   E   W F  N+  +T + C   + ++    F+ + +N DF    C N  C W A +DG+Y  + D  +
Subjt:  RVEIHNDLHMYLLDSHCYSKDNDLGLHVLFPDEQQNWSFKGNWDDTTDFHCRL-EWEVGCLEFDSFISNPDFVINNCCNKTCIWSARQDGVYLNNADDKE

Query:  IFFDY
         +  Y
Subjt:  IFFDY

Q3E9W6 S-protein homolog 207.8e-0839.56Show/hide
Query:  VEIHNDLHMYL-LDSHCYSKDNDLGLHVLFPDEQQNWSFKGNWD--DTTDFHCRLEWEVGCLEFDSFISNPDFVINNCCNKTCIWSARQDG
        V+I ND+   + L  HC SKD DLG   L P  QQ+W F+   D    T F C  EWE     FD  ++  D   N C    C+WS R  G
Subjt:  VEIHNDLHMYL-LDSHCYSKDNDLGLHVLFPDEQQNWSFKGNWD--DTTDFHCRLEWEVGCLEFDSFISNPDFVINNCCNKTCIWSARQDG

Arabidopsis top hitse value%identityAlignment
AT2G06090.1 Plant self-incompatibility protein S1 family2.1e-0835.23Show/hide
Query:  LLDSHCYSKDNDLGLHVLFPDEQQNWSFKGNWDDTTDFHCRLEWEVG---CLEFDSFISNPDFVINNCCNKTCIWSARQDGVYLNNAD
        +L  HC SKD+DLG+H +    + N+ F+ +    T+F C L   VG    + F ++ + P FV +    K  IW A  DG+YL + D
Subjt:  LLDSHCYSKDNDLGLHVLFPDEQQNWSFKGNWDDTTDFHCRLEWEVG---CLEFDSFISNPDFVINNCCNKTCIWSARQDGVYLNNAD

AT4G16195.1 Plant self-incompatibility protein S1 family7.2e-0928.85Show/hide
Query:  MLLLVLLLLTSLNTSTAKEKKFPKNKNKKPKLPDPNDP-----IVSFQKFRVEIHNDL-HMYLLDSHCYSKDNDLGLHVLFPDEQQNWSFKGNWDDTTDF
        + +L++ + T L+ +           + K  +P PNDP     +    K  VEI+NDL +   L  HC SKD+DLG   L P E  ++SF   +   T +
Subjt:  MLLLVLLLLTSLNTSTAKEKKFPKNKNKKPKLPDPNDP-----IVSFQKFRVEIHNDL-HMYLLDSHCYSKDNDLGLHVLFPDEQQNWSFKGNWDDTTDF

Query:  HCRLEWEVGCLEFDSFISNPDFVINNCC-NKTCIWSARQDGVYLNNADDKEIFFDY
         C   W      FD +  + D   +N C +  C+W  R++G    N + K+    Y
Subjt:  HCRLEWEVGCLEFDSFISNPDFVINNCC-NKTCIWSARQDGVYLNNADDKEIFFDY

AT4G16295.1 S-protein homologue 18.0e-0832.26Show/hide
Query:  HCYSKDNDLGLHVLFPDEQQNWSFKGNWDDTTDFHCRLEWEVGCLEFDSFISNPDFVINNCCNKTCIWSARQDGVYL-NNADDKEIFFDYWEM
        HC SK++DLG   L    + +W+F  N   +T F C +  + G +  + F  +   + + C  K CIW+A+ DG+YL N+A  +++    WE+
Subjt:  HCYSKDNDLGLHVLFPDEQQNWSFKGNWDDTTDFHCRLEWEVGCLEFDSFISNPDFVINNCCNKTCIWSARQDGVYL-NNADDKEIFFDYWEM

AT4G24975.1 Plant self-incompatibility protein S1 family5.5e-0939.56Show/hide
Query:  VEIHNDLHMYL-LDSHCYSKDNDLGLHVLFPDEQQNWSFKGNWD--DTTDFHCRLEWEVGCLEFDSFISNPDFVINNCCNKTCIWSARQDG
        V+I ND+   + L  HC SKD DLG   L P  QQ+W F+   D    T F C  EWE     FD  ++  D   N C    C+WS R  G
Subjt:  VEIHNDLHMYL-LDSHCYSKDNDLGLHVLFPDEQQNWSFKGNWD--DTTDFHCRLEWEVGCLEFDSFISNPDFVINNCCNKTCIWSARQDG

AT4G29035.1 Plant self-incompatibility protein S1 family1.4e-0732.26Show/hide
Query:  HCYSKDNDLG-LHVLFPDEQQNWSFKGNWDDTTDFHCRLEWEVGCLEFDSFISNPDFVINNCCNKTCIWSARQDGVYL-NNADDKEIFFDYWE
        HC SK+NDLG +++ F D + +W+F  N   +T F C +  + G +    F  +   + + C  K C+W+A+ DG+YL N+A  +++  + W+
Subjt:  HCYSKDNDLG-LHVLFPDEQQNWSFKGNWDDTTDFHCRLEWEVGCLEFDSFISNPDFVINNCCNKTCIWSARQDGVYL-NNADDKEIFFDYWE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACATTGCAACGACTTATGCTATTGCTAGTTCTCTTGCTCCTAACCTCCTTGAACACGTCGACAGCCAAAGAAAAGAAGTTTCCGAAAAACAAAAATAAGAAGCCAAA
GTTACCAGATCCAAACGATCCTATCGTCTCATTTCAAAAGTTTCGGGTAGAGATTCACAATGACTTGCATATGTACTTGTTAGACAGTCATTGCTACTCCAAAGACAATG
ATTTAGGATTGCATGTGTTGTTCCCAGATGAGCAGCAAAATTGGTCGTTTAAAGGGAATTGGGATGACACGACAGATTTCCATTGTAGGTTGGAGTGGGAAGTAGGGTGT
TTAGAATTTGATAGTTTTATTAGTAATCCAGATTTTGTAATCAATAATTGTTGCAACAAAACTTGCATTTGGAGTGCGAGACAAGATGGAGTTTATTTGAACAATGCAGA
TGACAAAGAAATTTTTTTTGATTACTGGGAGATGCTTAGATAG
mRNA sequenceShow/hide mRNA sequence
ATGACATTGCAACGACTTATGCTATTGCTAGTTCTCTTGCTCCTAACCTCCTTGAACACGTCGACAGCCAAAGAAAAGAAGTTTCCGAAAAACAAAAATAAGAAGCCAAA
GTTACCAGATCCAAACGATCCTATCGTCTCATTTCAAAAGTTTCGGGTAGAGATTCACAATGACTTGCATATGTACTTGTTAGACAGTCATTGCTACTCCAAAGACAATG
ATTTAGGATTGCATGTGTTGTTCCCAGATGAGCAGCAAAATTGGTCGTTTAAAGGGAATTGGGATGACACGACAGATTTCCATTGTAGGTTGGAGTGGGAAGTAGGGTGT
TTAGAATTTGATAGTTTTATTAGTAATCCAGATTTTGTAATCAATAATTGTTGCAACAAAACTTGCATTTGGAGTGCGAGACAAGATGGAGTTTATTTGAACAATGCAGA
TGACAAAGAAATTTTTTTTGATTACTGGGAGATGCTTAGATAG
Protein sequenceShow/hide protein sequence
MTLQRLMLLLVLLLLTSLNTSTAKEKKFPKNKNKKPKLPDPNDPIVSFQKFRVEIHNDLHMYLLDSHCYSKDNDLGLHVLFPDEQQNWSFKGNWDDTTDFHCRLEWEVGC
LEFDSFISNPDFVINNCCNKTCIWSARQDGVYLNNADDKEIFFDYWEMLR