CuGenDBv2

Gene ID	HG10014667
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	ELL-associated factor 2
Genome location	Chr02:17539343..17542422
RNA-Seq Expression	HG10014667
Synteny	HG10014667
Gene Ontology terms	GO:0034243 - regulation of transcription elongation from RNA polymerase II promoter (biological process) GO:0045893 - positive regulation of transcription, DNA-templated (biological process) GO:0016020 - membrane (cellular component) GO:0032783 - ELL-EAF complex (cellular component) GO:0003711 - transcription elongation regulator activity (molecular function) GO:0016757 - transferase activity, transferring glycosyl groups (molecular function)
InterPro domains	IPR019194 - Transcription elongation factor Eaf, N-terminal IPR027093 - EAF family

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0035866.1 ELL-associated factor 2 [Cucumis melo var. makuwa]

1.8e-118

84.91

Show/hide

Query:  MANNNKEEPKTAPQPDRWYNLSLGPSFKDESSNKFCTLRYEFKPASIDKTKSGSLKKTKENRVTVEFQNNQFGKPNVAFVGSSEDYKENDAVLFFDGETF
        MANN  EEPKTAPQPDRWYNLSLGPSFKDESSNKFCT RYEFKPASIDKTK G LKKTKENRVTVEFQN+Q GKPN++F+GSSEDYK+NDAVLFFDGETF
Subjt:  MANNNKEEPKTAPQPDRWYNLSLGPSFKDESSNKFCTLRYEFKPASIDKTKSGSLKKTKENRVTVEFQNNQFGKPNVAFVGSSEDYKENDAVLFFDGETF

Query:  RLERLHRAVKQLRHLRQPVAKVSKPMHMGRGSFPTMPVEVERIDIGEPGNTGAKSGVASKGITDYSSDPPNVSASSPGVKYDDEHQDIHIDDIFGSLSSD
        RLERLHRA +    L  PV KV+KPMHMGR SFPTMPVEVERIDIGEPGN GAK  VASKG+TDYSSDPPN S SSPG+K DDEHQDI IDDIFGS+SSD
Subjt:  RLERLHRAVKQLRHLRQPVAKVSKPMHMGRGSFPTMPVEVERIDIGEPGNTGAKSGVASKGITDYSSDPPNVSASSPGVKYDDEHQDIHIDDIFGSLSSD

Query:  DGNNAEEERVETGFDINIPHQNDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAEGREGPTAAAA
        DGNNAEEERVETGFDINIPHQNDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAEGR   +++++
Subjt:  DGNNAEEERVETGFDINIPHQNDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAEGREGPTAAAA

KAG6579241.1 Ell-associated factor Eaf, partial [Cucurbita argyrosperma subsp. sororia]

3.7e-124

79.8

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Query:  MANNNKEEPKTAPQPDRWYNLSLGPSFKDESSNKFCTLRYEFKPASIDKTKSGSLKKTKENRVTVEFQNNQFGKPNVAFVGSSEDYKENDAVLFFDGETF
        MANNNKEEPKTAPQPDRWY+LSLGPSF +ESSNKFCTLRYEFKPASIDKTK GSLKKTKENRVT+EFQNNQ GKPNVAFVGSSEDYKENDAVLFFDGETF
Subjt:  MANNNKEEPKTAPQPDRWYNLSLGPSFKDESSNKFCTLRYEFKPASIDKTKSGSLKKTKENRVTVEFQNNQFGKPNVAFVGSSEDYKENDAVLFFDGETF

Query:  RLERLHRAVKQLRHLRQ--------------------------------PVAKVSKPMHMGRGSFPTMPVEVERIDIGEPGNTGAKSGVASKGITDYSSD
        RLERLHRAVKQLRHLRQ                                P AKV KPMHMGRGSFP++ VEVE+IDIGEPGNTGAK  VASKG  DYSSD
Subjt:  RLERLHRAVKQLRHLRQ--------------------------------PVAKVSKPMHMGRGSFPTMPVEVERIDIGEPGNTGAKSGVASKGITDYSSD

Query:  PPNVSASSPGVKYDDEHQDIHIDDIFGSLSSDDGNNAEEERVETGFDINIPHQNDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAEGREGPTAAAALRA
        PPNVSA SPG K DDEHQDI IDDIFGS+SSDD NNAEE++V+ GFDIN+PH NDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAEGREGPTAAAALRA
Subjt:  PPNVSASSPGVKYDDEHQDIHIDDIFGSLSSDDGNNAEEERVETGFDINIPHQNDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAEGREGPTAAAALRA

Query:  QL
        Q+
Subjt:  QL

XP_022939831.1 ELL-associated factor 1 [Cucurbita moschata]

3.7e-124

79.8

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Query:  MANNNKEEPKTAPQPDRWYNLSLGPSFKDESSNKFCTLRYEFKPASIDKTKSGSLKKTKENRVTVEFQNNQFGKPNVAFVGSSEDYKENDAVLFFDGETF
        MANNNKEEPKTAPQPDRWY+LSLGPSF +ESSNKFCTLRYEFKPASIDKTK GSLKKTKENRVT+EFQNNQ GKPNVAFVGSSEDYKENDAVLFFDGETF
Subjt:  MANNNKEEPKTAPQPDRWYNLSLGPSFKDESSNKFCTLRYEFKPASIDKTKSGSLKKTKENRVTVEFQNNQFGKPNVAFVGSSEDYKENDAVLFFDGETF

Query:  RLERLHRAVKQLRHLRQ--------------------------------PVAKVSKPMHMGRGSFPTMPVEVERIDIGEPGNTGAKSGVASKGITDYSSD
        RLERLHRAVKQLRHLRQ                                P AKV KPMHMGRGSFP++ VEVE+IDIGEPGNTGAK  VASKG  DYSSD
Subjt:  RLERLHRAVKQLRHLRQ--------------------------------PVAKVSKPMHMGRGSFPTMPVEVERIDIGEPGNTGAKSGVASKGITDYSSD

Query:  PPNVSASSPGVKYDDEHQDIHIDDIFGSLSSDDGNNAEEERVETGFDINIPHQNDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAEGREGPTAAAALRA
        PPNVSA SPG K DDEHQDI IDDIFGS+SSDD NNAEE++V+ GFDIN+PH NDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAEGREGPTAAAALRA
Subjt:  PPNVSASSPGVKYDDEHQDIHIDDIFGSLSSDDGNNAEEERVETGFDINIPHQNDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAEGREGPTAAAALRA

Query:  QL
        Q+
Subjt:  QL

XP_022993461.1 ELL-associated factor 1 [Cucurbita maxima]

9.8e-125

80.13

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Query:  MANNNKEEPKTAPQPDRWYNLSLGPSFKDESSNKFCTLRYEFKPASIDKTKSGSLKKTKENRVTVEFQNNQFGKPNVAFVGSSEDYKENDAVLFFDGETF
        MANNNKEEPKTAPQPDRWY+LSLGPSF +ESSNKFCTLRYEFKPASIDKTK GSLKKTKENRVT+EFQNNQ GKPNVAFVGSSEDYKENDAVLFFDGETF
Subjt:  MANNNKEEPKTAPQPDRWYNLSLGPSFKDESSNKFCTLRYEFKPASIDKTKSGSLKKTKENRVTVEFQNNQFGKPNVAFVGSSEDYKENDAVLFFDGETF

Query:  RLERLHRAVKQLRHLRQ--------------------------------PVAKVSKPMHMGRGSFPTMPVEVERIDIGEPGNTGAKSGVASKGITDYSSD
        RLERLHRAVKQLRHLRQ                                P AKV KPMHMGRGSFP++ VEVE+IDIGEPGNTGAKS VASKG  DYSSD
Subjt:  RLERLHRAVKQLRHLRQ--------------------------------PVAKVSKPMHMGRGSFPTMPVEVERIDIGEPGNTGAKSGVASKGITDYSSD

Query:  PPNVSASSPGVKYDDEHQDIHIDDIFGSLSSDDGNNAEEERVETGFDINIPHQNDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAEGREGPTAAAALRA
        PPNVSA SPG K DDEHQDI IDDIFGS+SSDD NNAEE++V+ GFDIN+PH NDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAEGREGPTAAAALRA
Subjt:  PPNVSASSPGVKYDDEHQDIHIDDIFGSLSSDDGNNAEEERVETGFDINIPHQNDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAEGREGPTAAAALRA

Query:  QL
        Q+
Subjt:  QL

XP_038893321.1 ELL-associated factor 2-like [Benincasa hispida]

9.8e-133

81.9

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Query:  MANNNKEEPKTAPQPDRWYNLSLGPSFKDESSNKFCTLRYEFKPASIDKTKSGSLKKTKENRVTVEFQNNQFGKPNVAFVGSSEDYKENDAVLFFDGETF
        MANNNKEEPKTAPQPDRWYNLSLGPSFKDESSNKFCTLRYEFKPASIDKTK GSLKKTKENRVTVEFQNNQFGKPNVAFVGSSEDYKENDAVLFFDGETF
Subjt:  MANNNKEEPKTAPQPDRWYNLSLGPSFKDESSNKFCTLRYEFKPASIDKTKSGSLKKTKENRVTVEFQNNQFGKPNVAFVGSSEDYKENDAVLFFDGETF

Query:  RLERLHRAVKQLRHLRQ---------------------------------------------PVAKVSKPMHMGRGSFPTMPVEVERIDIGEPGNTGAKS
        RLERLHRAVKQLRHLRQ                                             PVAKV+KPMHMGRGSFPTMPVEVERIDIGEPGNTGAKS
Subjt:  RLERLHRAVKQLRHLRQ---------------------------------------------PVAKVSKPMHMGRGSFPTMPVEVERIDIGEPGNTGAKS

Query:  GVASKGITDYSSDPPNVSASSPGVKYDDEHQDIHIDDIFGSLSSDDGNNAEEERVETGFDINIPHQNDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAE
         VASKG+ DYSSDPPNVSASSPG+K DDEHQDI IDD+FGS+ SDDGNNAEEERVETGFDINIPHQNDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAE
Subjt:  GVASKGITDYSSDPPNVSASSPGVKYDDEHQDIHIDDIFGSLSSDDGNNAEEERVETGFDINIPHQNDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAE

Query:  GREGPTAAAALRAQL
        GREGPTAAAALRAQ+
Subjt:  GREGPTAAAALRAQL

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KM56 EAF domain-containing protein

5.6e-118

76.22

Show/hide

Query:  MANNNKEEPKTAPQPDRWYNLSLGPSFKDESSNKFCTLRYEFKPASIDKTKSGSLKKTKENRVTVEFQNNQFGKPNVAFVGSSEDYKENDAVLFFDGETF
        MANN  EEPKTAPQPDRWYNLSLGPSFKDESSNKFCT RYEFKPASIDKTK G LKKTKENRVTVEFQN+Q GKPN++FVGSSEDYKENDAVLFFDGETF
Subjt:  MANNNKEEPKTAPQPDRWYNLSLGPSFKDESSNKFCTLRYEFKPASIDKTKSGSLKKTKENRVTVEFQNNQFGKPNVAFVGSSEDYKENDAVLFFDGETF

Query:  RLERLHRAVKQLRHLRQ------------------------------------------PVAKVSKPMHMGRGSFPTMPVEVERIDIGEPGNTGAKSGVA
        RLERLHRAV QLRHLRQ                                          PV KVSKPMHMGR SFPTMPVEVERIDIGEPGN GAK+ VA
Subjt:  RLERLHRAVKQLRHLRQ------------------------------------------PVAKVSKPMHMGRGSFPTMPVEVERIDIGEPGNTGAKSGVA

Query:  SKGITDYSSDPPNVSASSPGVKYDDEHQDIHIDDIFGSLSSDDGNNAEEERVETGFDINIPHQNDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAEGRE
        SKG+T+YSSDPPNVS SSPG+K DDEHQDI IDDIFGS+SSDDGNNAEEERVE GFDINIPHQNDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAEGR 
Subjt:  SKGITDYSSDPPNVSASSPGVKYDDEHQDIHIDDIFGSLSSDDGNNAEEERVETGFDINIPHQNDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAEGRE

Query:  GPTAAAA
          +++++
Subjt:  GPTAAAA

A0A1S3C0N3 ELL-associated factor 2

2.5e-118

74.84

Show/hide

Query:  MANNNKEEPKTAPQPDRWYNLSLGPSFKDESSNKFCTLRYEFKPASIDKTKSGSLKKTKENRVTVEFQNNQFGKPNVAFVGSSEDYKENDAVLFFDGETF
        MANN  EEPKTAPQPDRWYNLSLGPSFKDESSNKFCT RYEFKPASIDKTK G LKKTKENRVTVEFQN+Q GKPN++F+GSSEDYK+NDAVLFFDGETF
Subjt:  MANNNKEEPKTAPQPDRWYNLSLGPSFKDESSNKFCTLRYEFKPASIDKTKSGSLKKTKENRVTVEFQNNQFGKPNVAFVGSSEDYKENDAVLFFDGETF

Query:  RLERLHRAVKQLRHLRQ---------------------------------------------PVAKVSKPMHMGRGSFPTMPVEVERIDIGEPGNTGAKS
        RLERLHRAV QLRHLRQ                                             PV KV+KPMHMGR SFPTMPVEVERIDIGEPGN GAK 
Subjt:  RLERLHRAVKQLRHLRQ---------------------------------------------PVAKVSKPMHMGRGSFPTMPVEVERIDIGEPGNTGAKS

Query:  GVASKGITDYSSDPPNVSASSPGVKYDDEHQDIHIDDIFGSLSSDDGNNAEEERVETGFDINIPHQNDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAE
         VASKG+TDYSSDPPN S SSPG+K DDEHQDI IDDIFGS+SSDDGNNAEEERVETGFDINIPHQNDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAE
Subjt:  GVASKGITDYSSDPPNVSASSPGVKYDDEHQDIHIDDIFGSLSSDDGNNAEEERVETGFDINIPHQNDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAE

Query:  GREGPTAAAA
        GR   +++++
Subjt:  GREGPTAAAA

A0A5A7T0X1 ELL-associated factor 2

8.7e-119

84.91

Show/hide

Query:  MANNNKEEPKTAPQPDRWYNLSLGPSFKDESSNKFCTLRYEFKPASIDKTKSGSLKKTKENRVTVEFQNNQFGKPNVAFVGSSEDYKENDAVLFFDGETF
        MANN  EEPKTAPQPDRWYNLSLGPSFKDESSNKFCT RYEFKPASIDKTK G LKKTKENRVTVEFQN+Q GKPN++F+GSSEDYK+NDAVLFFDGETF
Subjt:  MANNNKEEPKTAPQPDRWYNLSLGPSFKDESSNKFCTLRYEFKPASIDKTKSGSLKKTKENRVTVEFQNNQFGKPNVAFVGSSEDYKENDAVLFFDGETF

Query:  RLERLHRAVKQLRHLRQPVAKVSKPMHMGRGSFPTMPVEVERIDIGEPGNTGAKSGVASKGITDYSSDPPNVSASSPGVKYDDEHQDIHIDDIFGSLSSD
        RLERLHRA +    L  PV KV+KPMHMGR SFPTMPVEVERIDIGEPGN GAK  VASKG+TDYSSDPPN S SSPG+K DDEHQDI IDDIFGS+SSD
Subjt:  RLERLHRAVKQLRHLRQPVAKVSKPMHMGRGSFPTMPVEVERIDIGEPGNTGAKSGVASKGITDYSSDPPNVSASSPGVKYDDEHQDIHIDDIFGSLSSD

Query:  DGNNAEEERVETGFDINIPHQNDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAEGREGPTAAAA
        DGNNAEEERVETGFDINIPHQNDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAEGR   +++++
Subjt:  DGNNAEEERVETGFDINIPHQNDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAEGREGPTAAAA

A0A6J1FGX9 ELL-associated factor 1

1.8e-124

79.8

Show/hide

Query:  MANNNKEEPKTAPQPDRWYNLSLGPSFKDESSNKFCTLRYEFKPASIDKTKSGSLKKTKENRVTVEFQNNQFGKPNVAFVGSSEDYKENDAVLFFDGETF
        MANNNKEEPKTAPQPDRWY+LSLGPSF +ESSNKFCTLRYEFKPASIDKTK GSLKKTKENRVT+EFQNNQ GKPNVAFVGSSEDYKENDAVLFFDGETF
Subjt:  MANNNKEEPKTAPQPDRWYNLSLGPSFKDESSNKFCTLRYEFKPASIDKTKSGSLKKTKENRVTVEFQNNQFGKPNVAFVGSSEDYKENDAVLFFDGETF

Query:  RLERLHRAVKQLRHLRQ--------------------------------PVAKVSKPMHMGRGSFPTMPVEVERIDIGEPGNTGAKSGVASKGITDYSSD
        RLERLHRAVKQLRHLRQ                                P AKV KPMHMGRGSFP++ VEVE+IDIGEPGNTGAK  VASKG  DYSSD
Subjt:  RLERLHRAVKQLRHLRQ--------------------------------PVAKVSKPMHMGRGSFPTMPVEVERIDIGEPGNTGAKSGVASKGITDYSSD

Query:  PPNVSASSPGVKYDDEHQDIHIDDIFGSLSSDDGNNAEEERVETGFDINIPHQNDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAEGREGPTAAAALRA
        PPNVSA SPG K DDEHQDI IDDIFGS+SSDD NNAEE++V+ GFDIN+PH NDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAEGREGPTAAAALRA
Subjt:  PPNVSASSPGVKYDDEHQDIHIDDIFGSLSSDDGNNAEEERVETGFDINIPHQNDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAEGREGPTAAAALRA

Query:  QL
        Q+
Subjt:  QL

A0A6J1JWD6 ELL-associated factor 1

4.7e-125

80.13

Show/hide

Query:  MANNNKEEPKTAPQPDRWYNLSLGPSFKDESSNKFCTLRYEFKPASIDKTKSGSLKKTKENRVTVEFQNNQFGKPNVAFVGSSEDYKENDAVLFFDGETF
        MANNNKEEPKTAPQPDRWY+LSLGPSF +ESSNKFCTLRYEFKPASIDKTK GSLKKTKENRVT+EFQNNQ GKPNVAFVGSSEDYKENDAVLFFDGETF
Subjt:  MANNNKEEPKTAPQPDRWYNLSLGPSFKDESSNKFCTLRYEFKPASIDKTKSGSLKKTKENRVTVEFQNNQFGKPNVAFVGSSEDYKENDAVLFFDGETF

Query:  RLERLHRAVKQLRHLRQ--------------------------------PVAKVSKPMHMGRGSFPTMPVEVERIDIGEPGNTGAKSGVASKGITDYSSD
        RLERLHRAVKQLRHLRQ                                P AKV KPMHMGRGSFP++ VEVE+IDIGEPGNTGAKS VASKG  DYSSD
Subjt:  RLERLHRAVKQLRHLRQ--------------------------------PVAKVSKPMHMGRGSFPTMPVEVERIDIGEPGNTGAKSGVASKGITDYSSD

Query:  PPNVSASSPGVKYDDEHQDIHIDDIFGSLSSDDGNNAEEERVETGFDINIPHQNDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAEGREGPTAAAALRA
        PPNVSA SPG K DDEHQDI IDDIFGS+SSDD NNAEE++V+ GFDIN+PH NDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAEGREGPTAAAALRA
Subjt:  PPNVSASSPGVKYDDEHQDIHIDDIFGSLSSDDGNNAEEERVETGFDINIPHQNDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAEGREGPTAAAALRA

Query:  QL
        Q+
Subjt:  QL

SwissProt top hits

e value

%identity

Alignment

B3NA01 Ell-associated factor Eaf

1.2e-05

31.78

Show/hide

Query:  LSLGPSFKDE-SSNKFCTLRYEFKPASIDKTKSGSLKKTKENRVTVEFQNNQ-FGKPNVAFVGSSEDYKENDAVLFFDGET--FRLERLHRAVKQLRHLR
        L LG +F  + +S  F T++Y+FKPAS+D ++  S+     N+VTV   N++  G P+  + G+  +Y + + ++ +D ET    +E+L+  + Q++  R
Subjt:  LSLGPSFKDE-SSNKFCTLRYEFKPASIDKTKSGSLKKTKENRVTVEFQNNQ-FGKPNVAFVGSSEDYKENDAVLFFDGET--FRLERLHRAVKQLRHLR

Query:  QPVAKVS
          VA  S
Subjt:  QPVAKVS

B4HQT6 Ell-associated factor Eaf

1.2e-05

30.51

Show/hide

Query:  LSLGPSFKDE-SSNKFCTLRYEFKPASIDKTKSGSLKKTKENRVTVEFQNNQ-FGKPNVAFVGSSEDYKENDAVLFFDGET--FRLERLHRAVKQLRHLR
        L LG +F  + +S  F T++Y+FKPAS+D ++  S+     N+VTV   N++  G P+  + G+  +Y + + ++ +D ET    +E+L+  + Q++  R
Subjt:  LSLGPSFKDE-SSNKFCTLRYEFKPASIDKTKSGSLKKTKENRVTVEFQNNQ-FGKPNVAFVGSSEDYKENDAVLFFDGET--FRLERLHRAVKQLRHLR

Query:  QPVAKVSKPM---HMGRG
          V+  S  +   +MG+G
Subjt:  QPVAKVSKPM---HMGRG

B4LMA2 Ell-associated factor Eaf

1.6e-05

29.49

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Query:  DRWYNLSLGPSFKDE-SSNKFCTLRYEFKPASIDKTKSGSLKKTKENRVTVEFQN-NQFGKPNVAFVGSSEDYKENDAVLFFDGET--FRLERLHRAVKQ
        D    L LG +F  + +S  F T++Y+FKPAS+D ++  ++     N+VTV   N    G P   + G+ + Y + + ++ FD ET    LERL+  + Q
Subjt:  DRWYNLSLGPSFKDE-SSNKFCTLRYEFKPASIDKTKSGSLKKTKENRVTVEFQN-NQFGKPNVAFVGSSEDYKENDAVLFFDGET--FRLERLHRAVKQ

Query:  LRHLRQPVAKVSKPMHMGRGSFPTMPVEVERIDIGEPGNTGAKSGVASKGITDYSS
        ++  R  V   +KP  M   + P        +  G P  + A +G  S G  + S+
Subjt:  LRHLRQPVAKVSKPMHMGRGSFPTMPVEVERIDIGEPGNTGAKSGVASKGITDYSS

B4P1N5 Ell-associated factor Eaf

1.6e-05

27.81

Show/hide

Query:  LSLGPSFKDE-SSNKFCTLRYEFKPASIDKTKSGSLKKTKENRVTVEFQNNQ-FGKPNVAFVGSSEDYKENDAVLFFDGET--FRLERLHRAVKQLRHLR
        L LG +F  + +S  F T++Y+FKPAS+D ++  S+     N+VTV   N++  G P+  + G+  +Y + + ++ +D ET    +E+L+  + Q++  R
Subjt:  LSLGPSFKDE-SSNKFCTLRYEFKPASIDKTKSGSLKKTKENRVTVEFQNNQ-FGKPNVAFVGSSEDYKENDAVLFFDGET--FRLERLHRAVKQLRHLR

Query:  QPVAKVS-------KPMHMGRGSFPTMPVEVERIDIGEPGNTGAKSGVASK
          V   S         ++MG+G   +          G     G  SG A K
Subjt:  QPVAKVS-------KPMHMGRGSFPTMPVEVERIDIGEPGNTGAKSGVASK

Q7JRJ1 Ell-associated factor Eaf

9.5e-06

28.47

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Query:  LSLGPSFKDE-SSNKFCTLRYEFKPASIDKTKSGSLKKTKENRVTVEFQNNQ-FGKPNVAFVGSSEDYKENDAVLFFDGET--FRLERLHRAVKQLRHLR
        L LG +F  + +S  F T++Y+FKPAS+D ++  S+     N+VTV   N++  G P+  + G+  +Y + + ++ +D ET    +E+L+  + Q++  R
Subjt:  LSLGPSFKDE-SSNKFCTLRYEFKPASIDKTKSGSLKKTKENRVTVEFQNNQ-FGKPNVAFVGSSEDYKENDAVLFFDGET--FRLERLHRAVKQLRHLR

Query:  QPVAKVSKPMHMGRGSFPTMPVEVERIDIGEPGNTGA
          V   S              V++   ++G+P N GA
Subjt:  QPVAKVSKPMHMGRGSFPTMPVEVERIDIGEPGNTGA

Arabidopsis top hits

e value

%identity

Alignment

AT1G71080.1 RNA polymerase II transcription elongation factor

5.5e-65

52.07

Show/hide

Query:  MANNNKEEPKTAPQPDRWYNLSLGPSFKDESSNKFCTLRYEFKPASIDKTKSGSLKKTKENRVTVEFQNNQFGKPNVAFVGSSEDYKENDAVLFFDGETF
        M+N++++EP TAP+ D+WY+L LG S KD+SS+KFCTLRYEFKPASIDK +SGS+ K K+NRV+VEFQNNQ GKP V F GSSEDYKE+DAVLFFDGE F
Subjt:  MANNNKEEPKTAPQPDRWYNLSLGPSFKDESSNKFCTLRYEFKPASIDKTKSGSLKKTKENRVTVEFQNNQFGKPNVAFVGSSEDYKENDAVLFFDGETF

Query:  RLERLHRAVKQLRHLR-------------------QPVAKVSKPMHMGRGSFPTMPVEVERIDIGEPGNTGAKSGVASKGITDYSSDPPNVSASSP-GVK
        RLERLHRAV QLRH+R                    PV + +K   + R   P +PVEVERI+IG+P N+   +               NV A+SP   K
Subjt:  RLERLHRAVKQLRHLR-------------------QPVAKVSKPMHMGRGSFPTMPVEVERIDIGEPGNTGAKSGVASKGITDYSSDPPNVSASSP-GVK

Query:  YD--DEHQDIHIDDIFGSLSSDDGNNAEEERVETGFDINIPHQ--NDTDDEIADV-DDSGDEAEKGPNAAEALRAQVNAEGREGPTAAAA
         D  DEHQ+I + +IFGS + ++ +NAE+E  + G  +   ++  + T++EIADV DDSG E EKG NAAEALRAQVNAE ++  T++++
Subjt:  YD--DEHQDIHIDDIFGSLSSDDGNNAEEERVETGFDINIPHQ--NDTDDEIADV-DDSGDEAEKGPNAAEALRAQVNAEGREGPTAAAA

AT5G38050.1 RNA polymerase II transcription elongation factor

2.5e-46

45.49

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Query:  NNNKEEPKTAPQPDRWYNLSLGPSFKDES---SNKFCTLRYEFKPASIDKTKSGSLKKTKENRVTVEFQNNQFGKPNVAFVGSSEDY--KENDAVLFFDG
        +N+ EEPK AP+P+RWYN++LGP+  + +   S KFCTLRYEFKPASID TK G L K+K+N+VT+EFQNNQ  KP V F G SEDY  ++ DA+LFFDG
Subjt:  NNNKEEPKTAPQPDRWYNLSLGPSFKDES---SNKFCTLRYEFKPASIDKTKSGSLKKTKENRVTVEFQNNQFGKPNVAFVGSSEDY--KENDAVLFFDG

Query:  ETFRLERLHRAVKQLRHLRQPVAKVSKPMHMGRGSFPT-MPVEVERIDIGEPGNTGAKSGVASKGITDYSSDPPNVSASSPGVKYDDEHQDIHIDDIFGS
        E FRLE+LHR+VK+L+ LR P    S    + +   P   PV++  IDI  P                                  D  +D++I+D    
Subjt:  ETFRLERLHRAVKQLRHLRQPVAKVSKPMHMGRGSFPT-MPVEVERIDIGEPGNTGAKSGVASKGITDYSSDPPNVSASSPGVKYDDEHQDIHIDDIFGS

Query:  LSSDDGNNAEEERVETG---FDINIPHQND-TDDEIADVDDSGDEAEKGPNAAEALRAQVNAEGRE
           ++      +  +TG    DIN+PH  +  DDEIA VD + DE+ KG NAAEALRAQVNAE RE
Subjt:  LSSDDGNNAEEERVETG---FDINIPHQND-TDDEIADVDDSGDEAEKGPNAAEALRAQVNAEGRE

Sequences

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CDS sequence

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ATGGCAAACAACAATAAAGAAGAGCCGAAGACCGCGCCCCAGCCCGATCGGTGGTATAACCTATCTCTTGGTCCTTCATTCAAGGATGAATCCTCCAACAAATTTTGCAC
TCTTCGATATGAATTTAAACCGGCGTCAATTGATAAAACGAAGTCGGGATCGCTGAAAAAGACCAAGGAAAATAGGGTTACTGTTGAATTTCAGAACAATCAATTTGGGA
AACCCAATGTGGCGTTTGTTGGTAGTAGTGAGGATTATAAGGAGAATGATGCTGTTTTGTTTTTTGATGGCGAGACATTCCGGTTGGAGCGGCTGCACCGGGCGGTCAAG
CAGCTTCGTCACCTTCGACAGCCAGTGGCTAAAGTTTCCAAACCTATGCATATGGGTCGGGGCAGTTTTCCAACGATGCCGGTAGAGGTGGAAAGAATAGATATTGGAGA
GCCAGGAAATACAGGTGCAAAATCTGGTGTTGCTAGTAAAGGGATTACGGATTACTCATCAGATCCACCAAATGTATCTGCTTCCTCTCCTGGCGTGAAGTATGATGATG
AGCATCAAGATATACATATTGATGATATTTTTGGGTCTCTTTCATCTGATGATGGAAATAATGCTGAAGAAGAAAGAGTTGAGACTGGATTCGATATAAATATACCACAT
CAAAATGATACCGACGATGAGATTGCTGATGTGGATGATAGTGGCGACGAAGCTGAGAAAGGGCCTAATGCTGCAGAAGCCCTCAGAGCTCAGGTTAATGCTGAGGGTAG
GGAGGGACCTACTGCAGCAGCTGCCCTCAGAGCTCAGCTGAAGAAATCTTGA

mRNA sequence

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Protein sequence

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MANNNKEEPKTAPQPDRWYNLSLGPSFKDESSNKFCTLRYEFKPASIDKTKSGSLKKTKENRVTVEFQNNQFGKPNVAFVGSSEDYKENDAVLFFDGETFRLERLHRAVK
QLRHLRQPVAKVSKPMHMGRGSFPTMPVEVERIDIGEPGNTGAKSGVASKGITDYSSDPPNVSASSPGVKYDDEHQDIHIDDIFGSLSSDDGNNAEEERVETGFDINIPH
QNDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAEGREGPTAAAALRAQLKKS

HG10014667 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome