CuGenDBv2

Gene ID	HG10014677
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	SWIM-type domain-containing protein
Genome location	Chr02:17724267..17724584
RNA-Seq Expression	HG10014677
Synteny	HG10014677
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0048517.1 uncharacterized protein E6C27_scaffold61G001370 [Cucumis melo var. makuwa]

9.3e-15

40.78

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Query:  MDLIPCPHACLAICRRELHPHSYVDKFYRISTMQELYGEDVHPTEFSFHDTSSSTMNDVPVLLQKFKCAAGRPRKKRITSHIERRQTIKCGRCDQQGHNQ
        +DLIPC HAC+A+  R L+ H Y DKFY +S +  LY ++  P        ++    +  +L  + K  AGRP+KKR TS +E++ T++C RC ++GHN 
Subjt:  MDLIPCPHACLAICRRELHPHSYVDKFYRISTMQELYGEDVHPTEFSFHDTSSSTMNDVPVLLQKFKCAAGRPRKKRITSHIERRQTIKCGRCDQQGHNQ

Query:  RVC
        R C
Subjt:  RVC

XP_008442298.1 PREDICTED: uncharacterized protein LOC103486212 [Cucumis melo]

6.0e-14

39.81

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Query:  MDLIPCPHACLAICRRELHPHSYVDKFYRISTMQELYGEDVHPTEFSFHDTSSSTMNDVPVLLQKFKCAAGRPRKKRITSHIERRQTIKCGRCDQQGHNQ
        +DLIPC HAC+A+  R L+ H Y DKFY +S +  LY +   P        ++    +  +L  + K  AGRP+KKR TS +E++ +++C RC ++GHN 
Subjt:  MDLIPCPHACLAICRRELHPHSYVDKFYRISTMQELYGEDVHPTEFSFHDTSSSTMNDVPVLLQKFKCAAGRPRKKRITSHIERRQTIKCGRCDQQGHNQ

Query:  RVC
        R C
Subjt:  RVC

XP_008450195.1 PREDICTED: uncharacterized protein LOC103491855 [Cucumis melo]

2.7e-14

40.78

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Query:  MDLIPCPHACLAICRRELHPHSYVDKFYRISTMQELYGEDVHPTEFSFHDTSSSTMNDVPVLLQKFKCAAGRPRKKRITSHIERRQTIKCGRCDQQGHNQ
        +DLIPC HAC+A+  R L+ H Y DKFY +S +  LY +   P        ++    +  +L  + K  AGRP+KKR TS +E++ T++C RC ++GHN 
Subjt:  MDLIPCPHACLAICRRELHPHSYVDKFYRISTMQELYGEDVHPTEFSFHDTSSSTMNDVPVLLQKFKCAAGRPRKKRITSHIERRQTIKCGRCDQQGHNQ

Query:  RVC
        R C
Subjt:  RVC

XP_008456231.1 PREDICTED: uncharacterized protein LOC103496235 [Cucumis melo]

3.5e-14

40.78

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Query:  MDLIPCPHACLAICRRELHPHSYVDKFYRISTMQELYGEDVHPTEFSFHDTSSSTMNDVPVLLQKFKCAAGRPRKKRITSHIERRQTIKCGRCDQQGHNQ
        +DLIPC HAC+A+  R L+ H Y DKFY +S +  LY +   P        +     +  +L  + K  AGRP+KKR TS +E++ T++C RC ++GHN 
Subjt:  MDLIPCPHACLAICRRELHPHSYVDKFYRISTMQELYGEDVHPTEFSFHDTSSSTMNDVPVLLQKFKCAAGRPRKKRITSHIERRQTIKCGRCDQQGHNQ

Query:  RVC
        R C
Subjt:  RVC

XP_022157216.1 uncharacterized protein LOC111023978 [Momordica charantia]

2.4e-18

47.62

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Query:  MDLIPCPHACLAICRRELHPHSYVDKFYRISTMQELYGEDVHPTEFSFHDTSSSTMNDVPVLLQKFKCAAGRPRKKRITSHIERRQTIKCGRCDQQGHNQ
        +D IPC HACLAI RR L  HS+V KFY + T+Q LY  +VHP     +       +D  +L    K +AGRPRKKR+ S +E   T++CGRC + GHN+
Subjt:  MDLIPCPHACLAICRRELHPHSYVDKFYRISTMQELYGEDVHPTEFSFHDTSSSTMNDVPVLLQKFKCAAGRPRKKRITSHIERRQTIKCGRCDQQGHNQ

Query:  RVCNN
        R C N
Subjt:  RVCNN

TrEMBL top hits

e value

%identity

Alignment

A0A1S3BPC4 uncharacterized protein LOC103491855

1.3e-14

40.78

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Query:  MDLIPCPHACLAICRRELHPHSYVDKFYRISTMQELYGEDVHPTEFSFHDTSSSTMNDVPVLLQKFKCAAGRPRKKRITSHIERRQTIKCGRCDQQGHNQ
        +DLIPC HAC+A+  R L+ H Y DKFY +S +  LY +   P        ++    +  +L  + K  AGRP+KKR TS +E++ T++C RC ++GHN 
Subjt:  MDLIPCPHACLAICRRELHPHSYVDKFYRISTMQELYGEDVHPTEFSFHDTSSSTMNDVPVLLQKFKCAAGRPRKKRITSHIERRQTIKCGRCDQQGHNQ

Query:  RVC
        R C
Subjt:  RVC

A0A1S3C2R0 uncharacterized protein LOC103496235

1.7e-14

40.78

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Query:  MDLIPCPHACLAICRRELHPHSYVDKFYRISTMQELYGEDVHPTEFSFHDTSSSTMNDVPVLLQKFKCAAGRPRKKRITSHIERRQTIKCGRCDQQGHNQ
        +DLIPC HAC+A+  R L+ H Y DKFY +S +  LY +   P        +     +  +L  + K  AGRP+KKR TS +E++ T++C RC ++GHN 
Subjt:  MDLIPCPHACLAICRRELHPHSYVDKFYRISTMQELYGEDVHPTEFSFHDTSSSTMNDVPVLLQKFKCAAGRPRKKRITSHIERRQTIKCGRCDQQGHNQ

Query:  RVC
        R C
Subjt:  RVC

A0A5D3CDB8 Uncharacterized protein

2.9e-14

39.81

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Query:  MDLIPCPHACLAICRRELHPHSYVDKFYRISTMQELYGEDVHPTEFSFHDTSSSTMNDVPVLLQKFKCAAGRPRKKRITSHIERRQTIKCGRCDQQGHNQ
        +DLIPC HAC+A+  R L+ H Y DKFY +S +  LY +   P        ++    +  +L  + K  AGRP+KKR TS +E++ +++C RC ++GHN 
Subjt:  MDLIPCPHACLAICRRELHPHSYVDKFYRISTMQELYGEDVHPTEFSFHDTSSSTMNDVPVLLQKFKCAAGRPRKKRITSHIERRQTIKCGRCDQQGHNQ

Query:  RVC
        R C
Subjt:  RVC

A0A5D3DY08 Uncharacterized protein

4.5e-15

40.78

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Query:  MDLIPCPHACLAICRRELHPHSYVDKFYRISTMQELYGEDVHPTEFSFHDTSSSTMNDVPVLLQKFKCAAGRPRKKRITSHIERRQTIKCGRCDQQGHNQ
        +DLIPC HAC+A+  R L+ H Y DKFY +S +  LY ++  P        ++    +  +L  + K  AGRP+KKR TS +E++ T++C RC ++GHN 
Subjt:  MDLIPCPHACLAICRRELHPHSYVDKFYRISTMQELYGEDVHPTEFSFHDTSSSTMNDVPVLLQKFKCAAGRPRKKRITSHIERRQTIKCGRCDQQGHNQ

Query:  RVC
        R C
Subjt:  RVC

A0A6J1DXB4 uncharacterized protein LOC111023978

1.1e-18

47.62

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Query:  MDLIPCPHACLAICRRELHPHSYVDKFYRISTMQELYGEDVHPTEFSFHDTSSSTMNDVPVLLQKFKCAAGRPRKKRITSHIERRQTIKCGRCDQQGHNQ
        +D IPC HACLAI RR L  HS+V KFY + T+Q LY  +VHP     +       +D  +L    K +AGRPRKKR+ S +E   T++CGRC + GHN+
Subjt:  MDLIPCPHACLAICRRELHPHSYVDKFYRISTMQELYGEDVHPTEFSFHDTSSSTMNDVPVLLQKFKCAAGRPRKKRITSHIERRQTIKCGRCDQQGHNQ

Query:  RVCNN
        R C N
Subjt:  RVCNN

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits	e value	%identity	Alignment
No hits found

Sequences

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CDS sequence

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ATGGATCTAATCCCATGCCCTCATGCATGCCTTGCTATATGTCGGAGAGAATTGCACCCACACTCATACGTTGATAAATTTTACCGTATTTCTACTATGCAGGAGCTTTA
TGGTGAGGATGTGCACCCAACTGAGTTCTCGTTCCATGACACTAGCTCATCAACCATGAATGATGTTCCAGTTCTCCTTCAGAAATTTAAATGCGCTGCTGGAAGGCCAA
GGAAAAAGAGAATTACATCCCATATAGAAAGGAGACAAACTATTAAATGTGGAAGATGTGATCAACAAGGGCACAATCAAAGAGTCTGCAACAACTGA

mRNA sequence

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Protein sequence

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MDLIPCPHACLAICRRELHPHSYVDKFYRISTMQELYGEDVHPTEFSFHDTSSSTMNDVPVLLQKFKCAAGRPRKKRITSHIERRQTIKCGRCDQQGHNQRVCNN

HG10014677 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome