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HG10014687 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10014687
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionAutophagy-related protein
Genome locationChr02:17956263..17957662
RNA-Seq ExpressionHG10014687
SyntenyHG10014687
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008454838.1 PREDICTED: uncharacterized protein LOC103495149 isoform X1 [Cucumis melo]1.1e-2393.55Show/hide
Query:  MMRRIHFVKWVTIFFMILHQILPFNSVFSICEFSLVNNGKMYNFNLASPTSKFPHGVLSEDG
        MMRRIHFVKWVT FFMILHQILPFNS FSICE+SLVNNGKMYNFNLASPTSK PHGVLSEDG
Subjt:  MMRRIHFVKWVTIFFMILHQILPFNSVFSICEFSLVNNGKMYNFNLASPTSKFPHGVLSEDG
XP_022146857.1 uncharacterized protein LOC111015954 [Momordica charantia]4.4e-2287.1Show/hide
Query:  MMRRIHFVKWVTIFFMILHQILPFNSVFSICEFSLVNNGKMYNFNLASPTSKFPHGVLSEDG
        MMRRI+FVKWVTIFFMILHQI PFNSVFS+CEFS +NNGKMYNFNLASP S FPHG+LSEDG
Subjt:  MMRRIHFVKWVTIFFMILHQILPFNSVFSICEFSLVNNGKMYNFNLASPTSKFPHGVLSEDG
XP_022977108.1 uncharacterized protein LOC111477272 [Cucurbita maxima]1.0e-1883.87Show/hide
Query:  MMRRIHFVKWVTIFFMILHQILPFNSVFSICEFSLVNNGKMYNFNLASPTSKFPHGVLSEDG
        MMR IHFVKW TIFFMIL QI PF+SV+S CEFS VNNGKMYNFNLASP SKF HGVLSEDG
Subjt:  MMRRIHFVKWVTIFFMILHQILPFNSVFSICEFSLVNNGKMYNFNLASPTSKFPHGVLSEDG
XP_031741574.1 uncharacterized protein LOC101220308 isoform X1 [Cucumis sativus]3.6e-2493.55Show/hide
Query:  MMRRIHFVKWVTIFFMILHQILPFNSVFSICEFSLVNNGKMYNFNLASPTSKFPHGVLSEDG
        MMRRIHFVKWVT FF+ILHQILPFNS FSICE+SLVNNGKMYNFNLASPTSKFPHGVLSEDG
Subjt:  MMRRIHFVKWVTIFFMILHQILPFNSVFSICEFSLVNNGKMYNFNLASPTSKFPHGVLSEDG
XP_038892376.1 uncharacterized protein LOC120081502 [Benincasa hispida]4.3e-2596.77Show/hide
Query:  MMRRIHFVKWVTIFFMILHQILPFNSVFSICEFSLVNNGKMYNFNLASPTSKFPHGVLSEDG
        MMRRIHF KWVTIFFMILHQILPFNSVFSICEF+LVNNGKMYNFNLASPTSKFPHGVLSEDG
Subjt:  MMRRIHFVKWVTIFFMILHQILPFNSVFSICEFSLVNNGKMYNFNLASPTSKFPHGVLSEDG
TrEMBL top hitse value%identityAlignment
A0A0A0KQL1 Uncharacterized protein1.8e-2493.55Show/hide
Query:  MMRRIHFVKWVTIFFMILHQILPFNSVFSICEFSLVNNGKMYNFNLASPTSKFPHGVLSEDG
        MMRRIHFVKWVT FF+ILHQILPFNS FSICE+SLVNNGKMYNFNLASPTSKFPHGVLSEDG
Subjt:  MMRRIHFVKWVTIFFMILHQILPFNSVFSICEFSLVNNGKMYNFNLASPTSKFPHGVLSEDG
A0A1S3C0Q5 uncharacterized protein LOC103495149 isoform X15.1e-2493.55Show/hide
Query:  MMRRIHFVKWVTIFFMILHQILPFNSVFSICEFSLVNNGKMYNFNLASPTSKFPHGVLSEDG
        MMRRIHFVKWVT FFMILHQILPFNS FSICE+SLVNNGKMYNFNLASPTSK PHGVLSEDG
Subjt:  MMRRIHFVKWVTIFFMILHQILPFNSVFSICEFSLVNNGKMYNFNLASPTSKFPHGVLSEDG
A0A6J1D0R6 uncharacterized protein LOC1110159542.1e-2287.1Show/hide
Query:  MMRRIHFVKWVTIFFMILHQILPFNSVFSICEFSLVNNGKMYNFNLASPTSKFPHGVLSEDG
        MMRRI+FVKWVTIFFMILHQI PFNSVFS+CEFS +NNGKMYNFNLASP S FPHG+LSEDG
Subjt:  MMRRIHFVKWVTIFFMILHQILPFNSVFSICEFSLVNNGKMYNFNLASPTSKFPHGVLSEDG
A0A6J1H0Z4 uncharacterized protein LOC1114585781.9e-1883.87Show/hide
Query:  MMRRIHFVKWVTIFFMILHQILPFNSVFSICEFSLVNNGKMYNFNLASPTSKFPHGVLSEDG
        MMR IHFVKW TIFFMIL QI PF+SV S CEFS VNNGKMYNFNLASP SKF HGVLSEDG
Subjt:  MMRRIHFVKWVTIFFMILHQILPFNSVFSICEFSLVNNGKMYNFNLASPTSKFPHGVLSEDG
A0A6J1IIX2 uncharacterized protein LOC1114772725.0e-1983.87Show/hide
Query:  MMRRIHFVKWVTIFFMILHQILPFNSVFSICEFSLVNNGKMYNFNLASPTSKFPHGVLSEDG
        MMR IHFVKW TIFFMIL QI PF+SV+S CEFS VNNGKMYNFNLASP SKF HGVLSEDG
Subjt:  MMRRIHFVKWVTIFFMILHQILPFNSVFSICEFSLVNNGKMYNFNLASPTSKFPHGVLSEDG
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G40316.1 FUNCTIONS IN: molecular_function unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Autophagy-related protein 27 (InterPro:IPR018939); Has 138 Blast hits to 138 proteins in 57 species: Archae - 0; Bacteria - 0; Metazoa - 32; Fungi - 62; Plants - 33; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink).2.4e-0545.28Show/hide
Query:  WVTIFFMILHQILPFNSVFSICEFSLVNNGKMYNFNLASPTSKFPHGVLSEDG
        W+  F +I    +  + V S CEFS     K+++FNLAS    +PHGVLSEDG
Subjt:  WVTIFFMILHQILPFNSVFSICEFSLVNNGKMYNFNLASPTSKFPHGVLSEDG

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGCGTAGAATCCATTTTGTGAAATGGGTTACCATTTTCTTCATGATTCTACACCAAATTCTGCCCTTCAATTCCGTCTTCTCCATTTGCGAGTTTAGTTTGGTTAA
CAATGGAAAGATGTATAACTTCAACCTGGCATCGCCTACCTCCAAATTCCCTCATGGAGTCCTCAGCGAAGACGGGGTGCCCATGCAAATGGGTTGTGAATATTGGGAGC
ATGAAACATATAGTTATACATCAACCGAACCTGAGCACAAAAGTAGGTTCACACTAGTTCTTCCAAAATGCTACTCTCGTAAGCGGTTTTCAACTCCAACCTCTAAGATT
GATGACTTTAATTCTGATGTTTCAGAAGAAAGTTGTGTTCATGCACAAGTTCCAGCTTTGATCTCGAAAAAATCTAAGTTAAACTCTTCAAGATTTCACCCAGCTAAGGC
CATCCATTCCTATGTTATTTCACTGCCAAACTCAAAATATAAGCTTATCAAGGAGGTGTACAGTCATTCGATTTCAGAACACCATGTTAACGAGGTCGATTCTGATGATG
ATTCATCAGTAAGTGTCACCAGCGATGAAGCAGAACTTTTGGCCTCAAATTCTGTTCCAGAAGGGGAGAATGACTTCTTTGGAGAAGAAATTGCAGGACTATGTCAAAAC
TCTTCTGAAAAAAAAGTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGATGCGTAGAATCCATTTTGTGAAATGGGTTACCATTTTCTTCATGATTCTACACCAAATTCTGCCCTTCAATTCCGTCTTCTCCATTTGCGAGTTTAGTTTGGTTAA
CAATGGAAAGATGTATAACTTCAACCTGGCATCGCCTACCTCCAAATTCCCTCATGGAGTCCTCAGCGAAGACGGGGTGCCCATGCAAATGGGTTGTGAATATTGGGAGC
ATGAAACATATAGTTATACATCAACCGAACCTGAGCACAAAAGTAGGTTCACACTAGTTCTTCCAAAATGCTACTCTCGTAAGCGGTTTTCAACTCCAACCTCTAAGATT
GATGACTTTAATTCTGATGTTTCAGAAGAAAGTTGTGTTCATGCACAAGTTCCAGCTTTGATCTCGAAAAAATCTAAGTTAAACTCTTCAAGATTTCACCCAGCTAAGGC
CATCCATTCCTATGTTATTTCACTGCCAAACTCAAAATATAAGCTTATCAAGGAGGTGTACAGTCATTCGATTTCAGAACACCATGTTAACGAGGTCGATTCTGATGATG
ATTCATCAGTAAGTGTCACCAGCGATGAAGCAGAACTTTTGGCCTCAAATTCTGTTCCAGAAGGGGAGAATGACTTCTTTGGAGAAGAAATTGCAGGACTATGTCAAAAC
TCTTCTGAAAAAAAAGTTTGA
Protein sequenceShow/hide protein sequence
MMRRIHFVKWVTIFFMILHQILPFNSVFSICEFSLVNNGKMYNFNLASPTSKFPHGVLSEDGVPMQMGCEYWEHETYSYTSTEPEHKSRFTLVLPKCYSRKRFSTPTSKI
DDFNSDVSEESCVHAQVPALISKKSKLNSSRFHPAKAIHSYVISLPNSKYKLIKEVYSHSISEHHVNEVDSDDDSSVSVTSDEAELLASNSVPEGENDFFGEEIAGLCQN
SSEKKV