; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10014721 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10014721
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionReverse transcriptase Ty1/copia-type domain-containing protein
Genome locationChr02:18575690..18578650
RNA-Seq ExpressionHG10014721
SyntenyHG10014721
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041779.1 uncharacterized protein E6C27_scaffold67G001380 [Cucumis melo var. makuwa]2.1e-1648.39Show/hide
Query:  WKLVVKRNIVDEEELSGHTQECLELMELLLNLGLERIVLNLGYFYPQLVREFIVNLTTSFSNPASIDFQKVHVRLHPFMFSPTLISQFLHRNV
        WK V++R IVD   +S   Q C+ +M+L+   GLE+ + N+G FYPQL+REFIVNL   F++P+S D+Q VH+R   F+ SPT+I+ FL   V
Subjt:  WKLVVKRNIVDEEELSGHTQECLELMELLLNLGLERIVLNLGYFYPQLVREFIVNLTTSFSNPASIDFQKVHVRLHPFMFSPTLISQFLHRNV

XP_038887050.1 uncharacterized protein LOC120077220 [Benincasa hispida]2.8e-2143.79Show/hide
Query:  EDTGPVQITRVSTKAKG-ANLWKLVVKRNIVDEEELSGHTQECLELMELLLNLGLERIVLNLGYFYPQLVREFIVNLTTSFSNPASIDFQKVHVRLHPFM
        +D   V +  ++  ++G A +WK VV + IV E +L    Q  LE+M L +   +   VLN G +YPQLV EF VNL+  F N  S+D++KVHV  H F+
Subjt:  EDTGPVQITRVSTKAKG-ANLWKLVVKRNIVDEEELSGHTQECLELMELLLNLGLERIVLNLGYFYPQLVREFIVNLTTSFSNPASIDFQKVHVRLHPFM

Query:  FSPTLISQFLHRNVPENVTKQRLSLRDFVFELTSGARLLY-----LPCHLDLS
        FS  LI++FL+  VPENVT+QR  + D VFELT   +  +     LPC  DLS
Subjt:  FSPTLISQFLHRNVPENVTKQRLSLRDFVFELTSGARLLY-----LPCHLDLS

XP_038889203.1 uncharacterized protein LOC120079088 [Benincasa hispida]1.7e-2143.02Show/hide
Query:  DVNVDVDASFETSDHETEKSLSKESSDWGLISNFDNEDTGPVQITRVSTKAKGANLWKLVVKRNIVDEEELSGHTQECLELMELLLNLGLERIVLNLGYF
        D N DVD SFE+S+H +++S SKE+SDWG                     ++ A+LWK VVKRNIVDE+ELS  TQEC +LMEL+               
Subjt:  DVNVDVDASFETSDHETEKSLSKESSDWGLISNFDNEDTGPVQITRVSTKAKGANLWKLVVKRNIVDEEELSGHTQECLELMELLLNLGLERIVLNLGYF

Query:  YPQLVREFIVNLTTSFSNPASIDFQKVHVRLHPFMFSPTLISQFLHRNVPENVTKQRLSLRDFVFELTSGAR
                                 KVH+R H F FS  +I+QFL RNVPENV +Q  SLRD VFELT GAR
Subjt:  YPQLVREFIVNLTTSFSNPASIDFQKVHVRLHPFMFSPTLISQFLHRNVPENVTKQRLSLRDFVFELTSGAR

XP_038904247.1 uncharacterized protein LOC120090596 [Benincasa hispida]7.2e-1742.98Show/hide
Query:  WKLVVKRNIVDEEELSGHTQECLELMELLLNLGLERIVLNLGYFYPQLVREFIVNLTTSFSNPASIDFQKVHVRLHPFMFSPTLISQFLHRNVPENVTKQ
        WK VV+R IVDE+  S  T+ CL++M+LL ++GL + V+NL  FYPQL+RE IVNL + F +P + D++K+H   + F  SP  I+ +L R     +   
Subjt:  WKLVVKRNIVDEEELSGHTQECLELMELLLNLGLERIVLNLGYFYPQLVREFIVNLTTSFSNPASIDFQKVHVRLHPFMFSPTLISQFLHRNVPENVTKQ

Query:  RLSLRDFVFELTSG
          S+ +F+ ELT G
Subjt:  RLSLRDFVFELTSG

XP_038904458.1 uncharacterized protein LOC120090822 [Benincasa hispida]1.4e-2052.07Show/hide
Query:  KGANLWKLVVKRNIVDEEELSGHTQECLELMELLLNLGLERIVLNLGYFYPQLVREFIVNLTTSFSNPASIDFQKVHVRLHPFMFSPTLISQFLHRNVPE
        + A+LWK VVKRNIV E+ELS  TQ+C++ MEL+    LER VLNLG +YP L                     +VH+R H F+FS T+I+QFL RNVPE
Subjt:  KGANLWKLVVKRNIVDEEELSGHTQECLELMELLLNLGLERIVLNLGYFYPQLVREFIVNLTTSFSNPASIDFQKVHVRLHPFMFSPTLISQFLHRNVPE

Query:  NVTKQRLSLRDFVFELTSGAR
        NV KQ  SLRD VFEL   AR
Subjt:  NVTKQRLSLRDFVFELTSGAR

TrEMBL top hitse value%identityAlignment
A0A1S3B5B5 uncharacterized protein LOC1034861791.9e-1546.24Show/hide
Query:  WKLVVKRNIVDEEELSGHTQECLELMELLLNLGLERIVLNLGYFYPQLVREFIVNLTTSFSNPASIDFQKVHVRLHPFMFSPTLISQFLHRNV
        WK V++R I D   +S   Q C+ +M+L+   GLE+ + N+G FYPQL+REFIVNL   F++P+S D+Q VH+R   F+ SP +I+ FL   V
Subjt:  WKLVVKRNIVDEEELSGHTQECLELMELLLNLGLERIVLNLGYFYPQLVREFIVNLTTSFSNPASIDFQKVHVRLHPFMFSPTLISQFLHRNV

A0A5A7SV32 Cell wall protein RBR3-like6.6e-1643.88Show/hide
Query:  WKLVVKRNIVDEEELSGHTQECLELMELLLNLGLERIVLNLGYFYPQLVREFIVNLTTSFSNPASIDFQKVHVRLHPFMFSPTLISQFLHRNVPENVT
        WK VV+R I DE  +S     CL +M+L++ +G  + + N+G FYP+L+REFIVNL + F+NP+S D+Q VH+R   F  SP +I+ FL   +    T
Subjt:  WKLVVKRNIVDEEELSGHTQECLELMELLLNLGLERIVLNLGYFYPQLVREFIVNLTTSFSNPASIDFQKVHVRLHPFMFSPTLISQFLHRNVPENVT

A0A5A7TK74 Uncharacterized protein1.0e-1648.39Show/hide
Query:  WKLVVKRNIVDEEELSGHTQECLELMELLLNLGLERIVLNLGYFYPQLVREFIVNLTTSFSNPASIDFQKVHVRLHPFMFSPTLISQFLHRNV
        WK V++R IVD   +S   Q C+ +M+L+   GLE+ + N+G FYPQL+REFIVNL   F++P+S D+Q VH+R   F+ SPT+I+ FL   V
Subjt:  WKLVVKRNIVDEEELSGHTQECLELMELLLNLGLERIVLNLGYFYPQLVREFIVNLTTSFSNPASIDFQKVHVRLHPFMFSPTLISQFLHRNV

A0A5D3BZR7 Cell wall protein RBR3-like2.3e-1641.23Show/hide
Query:  WKLVVKRNIVDEEELSGHTQECLELMELLLNLGLERIVLNLGYFYPQLVREFIVNLTTSFSNPASIDFQKVHVRLHPFMFSPTLISQFLHRNVPENVTKQ
        WK VV+R I DE  +S     CL +M L++ +GL +   N+G FYPQL+ EFIVNL   F++P+S D+Q +H++   F  SP +I++FL  +V  +    
Subjt:  WKLVVKRNIVDEEELSGHTQECLELMELLLNLGLERIVLNLGYFYPQLVREFIVNLTTSFSNPASIDFQKVHVRLHPFMFSPTLISQFLHRNVPENVTKQ

Query:  RLSLRDFVFELTSG
         +S  D  F L+SG
Subjt:  RLSLRDFVFELTSG

A0A5D3DTI5 Uncharacterized protein1.0e-1648.39Show/hide
Query:  WKLVVKRNIVDEEELSGHTQECLELMELLLNLGLERIVLNLGYFYPQLVREFIVNLTTSFSNPASIDFQKVHVRLHPFMFSPTLISQFLHRNV
        WK V++R IVD   +S   Q C+ +M+L+   GLE+ + N+G FYPQL+REFIVNL   F++P+S D+Q VH+R   F+ SPT+I+ FL   V
Subjt:  WKLVVKRNIVDEEELSGHTQECLELMELLLNLGLERIVLNLGYFYPQLVREFIVNLTTSFSNPASIDFQKVHVRLHPFMFSPTLISQFLHRNV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGAGTACTAAACAAGGCACTCAGACTTCTGATACGAAGATGGTAAGGCTCAAAGAAAAGGCCAAAAGAAAGATGAATATTGAAGAGGATGCTCCTCCCTCTATCAC
AAACAAATATGGGGTTCGCTTTCAAGGTCTTCCTGTGCCAAGCTCGAAAATCGAGGTTCCTCCTCCATCAACCAAACAAAGACGATCTGGTGCTGGTTTTCCTATTGAGG
AAAAAGGAAAAGAGAAAAGTTCTGATGAAGATGAAGACGATAAATCTCCCCTATTTGAACAAAAGTCAAAGAAAAATGAAGATGTCAATGTTGATGTTGATGCTTCTTTT
GAGACATCGGATCATGAAACTGAGAAATCACTATCTAAAGAGTCTTCTGATTGGGGTCTCATAAGCAATTTTGATAATGAGGACACTGGTCCTGTACAGATTACTCGTGT
CTCAACTAAAGCCAAAGGTGCCAACCTTTGGAAGTTGGTTGTTAAACGAAACATTGTGGATGAAGAGGAGTTATCAGGCCACACCCAAGAGTGTCTTGAGCTCATGGAGT
TGCTACTCAATTTGGGCTTGGAACGAATTGTGCTGAATTTGGGGTATTTCTACCCTCAGCTTGTGAGGGAGTTCATTGTTAATTTGACCACAAGTTTTTCTAATCCAGCT
AGTATAGACTTCCAGAAAGTTCATGTTCGTCTTCATCCATTTATGTTTTCTCCTACTCTTATTAGTCAATTTTTGCATCGTAATGTGCCAGAGAATGTGACCAAACAACG
CCTTTCATTGAGGGACTTTGTGTTTGAGCTTACAAGCGGTGCCAGGCTTCTCTATCTCCCTTGCCACCTTGATTTATCAAATCGGACCCTGGGCTCAATTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTGAGTACTAAACAAGGCACTCAGACTTCTGATACGAAGATGGTAAGGCTCAAAGAAAAGGCCAAAAGAAAGATGAATATTGAAGAGGATGCTCCTCCCTCTATCAC
AAACAAATATGGGGTTCGCTTTCAAGGTCTTCCTGTGCCAAGCTCGAAAATCGAGGTTCCTCCTCCATCAACCAAACAAAGACGATCTGGTGCTGGTTTTCCTATTGAGG
AAAAAGGAAAAGAGAAAAGTTCTGATGAAGATGAAGACGATAAATCTCCCCTATTTGAACAAAAGTCAAAGAAAAATGAAGATGTCAATGTTGATGTTGATGCTTCTTTT
GAGACATCGGATCATGAAACTGAGAAATCACTATCTAAAGAGTCTTCTGATTGGGGTCTCATAAGCAATTTTGATAATGAGGACACTGGTCCTGTACAGATTACTCGTGT
CTCAACTAAAGCCAAAGGTGCCAACCTTTGGAAGTTGGTTGTTAAACGAAACATTGTGGATGAAGAGGAGTTATCAGGCCACACCCAAGAGTGTCTTGAGCTCATGGAGT
TGCTACTCAATTTGGGCTTGGAACGAATTGTGCTGAATTTGGGGTATTTCTACCCTCAGCTTGTGAGGGAGTTCATTGTTAATTTGACCACAAGTTTTTCTAATCCAGCT
AGTATAGACTTCCAGAAAGTTCATGTTCGTCTTCATCCATTTATGTTTTCTCCTACTCTTATTAGTCAATTTTTGCATCGTAATGTGCCAGAGAATGTGACCAAACAACG
CCTTTCATTGAGGGACTTTGTGTTTGAGCTTACAAGCGGTGCCAGGCTTCTCTATCTCCCTTGCCACCTTGATTTATCAAATCGGACCCTGGGCTCAATTTAA
Protein sequenceShow/hide protein sequence
MVSTKQGTQTSDTKMVRLKEKAKRKMNIEEDAPPSITNKYGVRFQGLPVPSSKIEVPPPSTKQRRSGAGFPIEEKGKEKSSDEDEDDKSPLFEQKSKKNEDVNVDVDASF
ETSDHETEKSLSKESSDWGLISNFDNEDTGPVQITRVSTKAKGANLWKLVVKRNIVDEEELSGHTQECLELMELLLNLGLERIVLNLGYFYPQLVREFIVNLTTSFSNPA
SIDFQKVHVRLHPFMFSPTLISQFLHRNVPENVTKQRLSLRDFVFELTSGARLLYLPCHLDLSNRTLGSI