CuGenDBv2

Gene ID	HG10014732
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Expansin
Genome location	Chr02:18829335..18829496
RNA-Seq Expression	HG10014732
Synteny	HG10014732
Gene Ontology terms	GO:0009664 - plant-type cell wall organization (biological process) GO:0005576 - extracellular region (cellular component) GO:0016020 - membrane (cellular component)
InterPro domains	IPR002963 - Expansin IPR007117 - Expansin, cellulose-binding-like domain IPR036749 - Expansin, cellulose-binding-like domain superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

ADN33712.1 expansin [Cucumis melo subsp. melo]

8.0e-23

96.23

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Query:  MSRNWGKNWQSNNYLNGQGLSFQVTLSDGHTLTAYNLVPSNWQFGQTFEGPQF
        MSRNWG+NWQSNNYLNGQGLSFQVTLSDGHTLTAYNLVPSNWQFGQT+EGPQF
Subjt:  MSRNWGKNWQSNNYLNGQGLSFQVTLSDGHTLTAYNLVPSNWQFGQTFEGPQF

KAA0066982.1 expansin-A8-like [Cucumis melo var. makuwa]

8.0e-23

96.23

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Query:  MSRNWGKNWQSNNYLNGQGLSFQVTLSDGHTLTAYNLVPSNWQFGQTFEGPQF
        MSRNWG+NWQSNNYLNGQGLSFQVTLSDGHTLTAYNLVPSNWQFGQT+EGPQF
Subjt:  MSRNWGKNWQSNNYLNGQGLSFQVTLSDGHTLTAYNLVPSNWQFGQTFEGPQF

QDL52550.1 expansin A8 [Cucumis melo]

8.0e-23

96.23

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Query:  MSRNWGKNWQSNNYLNGQGLSFQVTLSDGHTLTAYNLVPSNWQFGQTFEGPQF
        MSRNWG+NWQSNNYLNGQGLSFQVTLSDGHTLTAYNLVPSNWQFGQT+EGPQF
Subjt:  MSRNWGKNWQSNNYLNGQGLSFQVTLSDGHTLTAYNLVPSNWQFGQTFEGPQF

XP_008456949.1 PREDICTED: expansin-A8-like [Cucumis melo]

8.0e-23

96.23

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Query:  MSRNWGKNWQSNNYLNGQGLSFQVTLSDGHTLTAYNLVPSNWQFGQTFEGPQF
        MSRNWG+NWQSNNYLNGQGLSFQVTLSDGHTLTAYNLVPSNWQFGQT+EGPQF
Subjt:  MSRNWGKNWQSNNYLNGQGLSFQVTLSDGHTLTAYNLVPSNWQFGQTFEGPQF

XP_038893384.1 expansin-A4-like [Benincasa hispida]

3.0e-22

96.23

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Query:  MSRNWGKNWQSNNYLNGQGLSFQVTLSDGHTLTAYNLVPSNWQFGQTFEGPQF
        MSRNWG+NWQSNNYLNGQGLSFQVTLSDG TLTAYNLVPSNWQFGQTFEGPQF
Subjt:  MSRNWGKNWQSNNYLNGQGLSFQVTLSDGHTLTAYNLVPSNWQFGQTFEGPQF

TrEMBL top hits

e value

%identity

Alignment

A0A1S3C3Z2 Expansin

3.9e-23

96.23

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Query:  MSRNWGKNWQSNNYLNGQGLSFQVTLSDGHTLTAYNLVPSNWQFGQTFEGPQF
        MSRNWG+NWQSNNYLNGQGLSFQVTLSDGHTLTAYNLVPSNWQFGQT+EGPQF
Subjt:  MSRNWGKNWQSNNYLNGQGLSFQVTLSDGHTLTAYNLVPSNWQFGQTFEGPQF

A0A515EIR3 Expansin

3.9e-23

96.23

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Query:  MSRNWGKNWQSNNYLNGQGLSFQVTLSDGHTLTAYNLVPSNWQFGQTFEGPQF
        MSRNWG+NWQSNNYLNGQGLSFQVTLSDGHTLTAYNLVPSNWQFGQT+EGPQF
Subjt:  MSRNWGKNWQSNNYLNGQGLSFQVTLSDGHTLTAYNLVPSNWQFGQTFEGPQF

A0A5D3BDQ9 Expansin

3.9e-23

96.23

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Query:  MSRNWGKNWQSNNYLNGQGLSFQVTLSDGHTLTAYNLVPSNWQFGQTFEGPQF
        MSRNWG+NWQSNNYLNGQGLSFQVTLSDGHTLTAYNLVPSNWQFGQT+EGPQF
Subjt:  MSRNWGKNWQSNNYLNGQGLSFQVTLSDGHTLTAYNLVPSNWQFGQTFEGPQF

E5GB70 Expansin

3.9e-23

96.23

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Query:  MSRNWGKNWQSNNYLNGQGLSFQVTLSDGHTLTAYNLVPSNWQFGQTFEGPQF
        MSRNWG+NWQSNNYLNGQGLSFQVTLSDGHTLTAYNLVPSNWQFGQT+EGPQF
Subjt:  MSRNWGKNWQSNNYLNGQGLSFQVTLSDGHTLTAYNLVPSNWQFGQTFEGPQF

Q39625 Expansin

3.3e-22

94.34

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Query:  MSRNWGKNWQSNNYLNGQGLSFQVTLSDGHTLTAYNLVPSNWQFGQTFEGPQF
        MSRNWG+NWQSNNYLNGQGLSFQVTLSDG TLTAYNLVPSNWQFGQT+EGPQF
Subjt:  MSRNWGKNWQSNNYLNGQGLSFQVTLSDGHTLTAYNLVPSNWQFGQTFEGPQF

SwissProt top hits

e value

%identity

Alignment

O22874 Expansin-A8

4.0e-17

69.81

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Query:  MSRNWGKNWQSNNYLNGQGLSFQVTLSDGHTLTAYNLVPSNWQFGQTFEGPQF
        MSRNWG+NWQSN+Y+N Q LSFQVT SDG TL + ++ PSNWQFGQT++G QF
Subjt:  MSRNWGKNWQSNNYLNGQGLSFQVTLSDGHTLTAYNLVPSNWQFGQTFEGPQF

O80622 Expansin-A15

3.4e-16

67.92

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Query:  MSRNWGKNWQSNNYLNGQGLSFQVTLSDGHTLTAYNLVPSNWQFGQTFEGPQF
        MSRNWG+NWQSNN LNGQ LSF+VT SDG T+ + N+ P++W FGQTF G QF
Subjt:  MSRNWGKNWQSNNYLNGQGLSFQVTLSDGHTLTAYNLVPSNWQFGQTFEGPQF

Q38866 Expansin-A2

1.0e-17

73.58

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Query:  MSRNWGKNWQSNNYLNGQGLSFQVTLSDGHTLTAYNLVPSNWQFGQTFEGPQF
        MSRNWG+NWQSN YL GQ LSFQVT SDG T+ +Y++VP +WQFGQTFEG QF
Subjt:  MSRNWGKNWQSNNYLNGQGLSFQVTLSDGHTLTAYNLVPSNWQFGQTFEGPQF

Q40636 Expansin-A2

3.6e-18

73.58

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Query:  MSRNWGKNWQSNNYLNGQGLSFQVTLSDGHTLTAYNLVPSNWQFGQTFEGPQF
        MSRNWG+NWQSN+YL+GQ LSFQV +SDG T+T+ N+VP+ WQFGQTFEG QF
Subjt:  MSRNWGKNWQSNNYLNGQGLSFQVTLSDGHTLTAYNLVPSNWQFGQTFEGPQF

Q9LDR9 Expansin-A10

2.6e-16

66.04

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Query:  MSRNWGKNWQSNNYLNGQGLSFQVTLSDGHTLTAYNLVPSNWQFGQTFEGPQF
        MSRNWG+NWQSN+YLNGQ LSF+VT SDG T+ ++N  P+ W +GQTF G QF
Subjt:  MSRNWGKNWQSNNYLNGQGLSFQVTLSDGHTLTAYNLVPSNWQFGQTFEGPQF

Arabidopsis top hits

e value

%identity

Alignment

AT1G26770.1 expansin A10

1.8e-17

66.04

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Query:  MSRNWGKNWQSNNYLNGQGLSFQVTLSDGHTLTAYNLVPSNWQFGQTFEGPQF
        MSRNWG+NWQSN+YLNGQ LSF+VT SDG T+ ++N  P+ W +GQTF G QF
Subjt:  MSRNWGKNWQSNNYLNGQGLSFQVTLSDGHTLTAYNLVPSNWQFGQTFEGPQF

AT1G26770.2 expansin A10

1.8e-17

66.04

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Query:  MSRNWGKNWQSNNYLNGQGLSFQVTLSDGHTLTAYNLVPSNWQFGQTFEGPQF
        MSRNWG+NWQSN+YLNGQ LSF+VT SDG T+ ++N  P+ W +GQTF G QF
Subjt:  MSRNWGKNWQSNNYLNGQGLSFQVTLSDGHTLTAYNLVPSNWQFGQTFEGPQF

AT2G03090.1 expansin A15

2.4e-17

67.92

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Query:  MSRNWGKNWQSNNYLNGQGLSFQVTLSDGHTLTAYNLVPSNWQFGQTFEGPQF
        MSRNWG+NWQSNN LNGQ LSF+VT SDG T+ + N+ P++W FGQTF G QF
Subjt:  MSRNWGKNWQSNNYLNGQGLSFQVTLSDGHTLTAYNLVPSNWQFGQTFEGPQF

AT2G40610.1 expansin A8

2.8e-18

69.81

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Query:  MSRNWGKNWQSNNYLNGQGLSFQVTLSDGHTLTAYNLVPSNWQFGQTFEGPQF
        MSRNWG+NWQSN+Y+N Q LSFQVT SDG TL + ++ PSNWQFGQT++G QF
Subjt:  MSRNWGKNWQSNNYLNGQGLSFQVTLSDGHTLTAYNLVPSNWQFGQTFEGPQF

AT5G05290.1 expansin A2

7.4e-19

73.58

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Query:  MSRNWGKNWQSNNYLNGQGLSFQVTLSDGHTLTAYNLVPSNWQFGQTFEGPQF
        MSRNWG+NWQSN YL GQ LSFQVT SDG T+ +Y++VP +WQFGQTFEG QF
Subjt:  MSRNWGKNWQSNNYLNGQGLSFQVTLSDGHTLTAYNLVPSNWQFGQTFEGPQF

Sequences

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CDS sequence

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ATGTCTAGAAATTGGGGCAAAAATTGGCAAAGCAACAACTATCTCAATGGTCAAGGCCTTTCCTTTCAAGTCACTCTTAGCGATGGTCACACTCTCACTGCCTATAATCT
CGTCCCTTCCAATTGGCAATTTGGCCAAACCTTTGAAGGCCCTCAATTCTAA

mRNA sequence

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ATGTCTAGAAATTGGGGCAAAAATTGGCAAAGCAACAACTATCTCAATGGTCAAGGCCTTTCCTTTCAAGTCACTCTTAGCGATGGTCACACTCTCACTGCCTATAATCT
CGTCCCTTCCAATTGGCAATTTGGCCAAACCTTTGAAGGCCCTCAATTCTAA

Protein sequence

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MSRNWGKNWQSNNYLNGQGLSFQVTLSDGHTLTAYNLVPSNWQFGQTFEGPQF

HG10014732 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome