; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10014787 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10014787
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionPHD finger protein ALFIN-LIKE 2-like
Genome locationChr02:19930626..19931118
RNA-Seq ExpressionHG10014787
SyntenyHG10014787
Gene Ontology termsGO:0006325 - chromatin organization (biological process)
GO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0000976 - transcription regulatory region sequence-specific DNA binding (molecular function)
GO:0003712 - transcription coregulator activity (molecular function)
GO:0042393 - histone binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001965 - Zinc finger, PHD-type
IPR011011 - Zinc finger, FYVE/PHD-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type
IPR019786 - Zinc finger, PHD-type, conserved site
IPR019787 - Zinc finger, PHD-finger
IPR044104 - Alfin1-like, PHD finger
IPR045104 - Alfin


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008463243.1 PREDICTED: PHD finger protein ALFIN-LIKE 2-like [Cucumis melo]2.6e-6197.46Show/hide
Query:  MINDLPTLFEVASGRKAVKDKPSMDTGSKSRNSTKRSLDGSIRNSNPKLLEESYGEDEDEHGDTLCGSCGGNYNADEFWIGCDICERWFHGKCVRITPAK
        MINDLPTLFEVASGRKAVKDKPSMD+GSKSRNSTKRSLDGS RNSNPKLLEESYGEDEDEHGDTLCGSCGGNYNADEFWIGCDICERW+HGKCVRITPAK
Subjt:  MINDLPTLFEVASGRKAVKDKPSMDTGSKSRNSTKRSLDGSIRNSNPKLLEESYGEDEDEHGDTLCGSCGGNYNADEFWIGCDICERWFHGKCVRITPAK

Query:  AENIKQYKCPSCSTKRGR
        AENIKQYKCPSCSTKRGR
Subjt:  AENIKQYKCPSCSTKRGR

XP_011654991.1 PHD finger protein ALFIN-LIKE 2 [Cucumis sativus]5.7e-6196.61Show/hide
Query:  MINDLPTLFEVASGRKAVKDKPSMDTGSKSRNSTKRSLDGSIRNSNPKLLEESYGEDEDEHGDTLCGSCGGNYNADEFWIGCDICERWFHGKCVRITPAK
        MINDLPTLFEVASGRKAVKDKPSMD+GSKSRNSTKR+LDGS RNSNPKLLEESYGEDEDEHGDTLCGSCGGNYNADEFWIGCDICE+WFHGKCVRITPAK
Subjt:  MINDLPTLFEVASGRKAVKDKPSMDTGSKSRNSTKRSLDGSIRNSNPKLLEESYGEDEDEHGDTLCGSCGGNYNADEFWIGCDICERWFHGKCVRITPAK

Query:  AENIKQYKCPSCSTKRGR
        AENIKQYKCPSCSTKRGR
Subjt:  AENIKQYKCPSCSTKRGR

XP_022156923.1 PHD finger protein ALFIN-LIKE 2-like [Momordica charantia]2.2e-6094.96Show/hide
Query:  MINDLPTLFEVASGRKAVKDKPSMDTGSKSRNSTKRSLDGSIRNSNPKLLEESYGEDEDEHGDTLCGSCGGNYNADEFWIGCDICERWFHGKCVRITPAK
        +INDLPTLFEVASGRKAVKDKPSMD+GSKSRNSTKRS+DGSIR+SN KLL+ESYGEDEDEHGDTLCGSCGGNYNADEFWIGCDICERWFHGKCVRITPAK
Subjt:  MINDLPTLFEVASGRKAVKDKPSMDTGSKSRNSTKRSLDGSIRNSNPKLLEESYGEDEDEHGDTLCGSCGGNYNADEFWIGCDICERWFHGKCVRITPAK

Query:  AENIKQYKCPSCSTKRGRP
        AENIKQYKCPSCSTKRGRP
Subjt:  AENIKQYKCPSCSTKRGRP

XP_022957000.1 PHD finger protein ALFIN-LIKE 2-like [Cucurbita moschata]4.4e-6196.61Show/hide
Query:  MINDLPTLFEVASGRKAVKDKPSMDTGSKSRNSTKRSLDGSIRNSNPKLLEESYGEDEDEHGDTLCGSCGGNYNADEFWIGCDICERWFHGKCVRITPAK
        MINDLPTLFEVASGRKAVKDKPSMD+GSKSRNSTKRSLDGSIRNSNPKLL+ESYGE+EDEHGDTLCGSCGGNYNADEFWIGCDICERWFHGKCVRITPAK
Subjt:  MINDLPTLFEVASGRKAVKDKPSMDTGSKSRNSTKRSLDGSIRNSNPKLLEESYGEDEDEHGDTLCGSCGGNYNADEFWIGCDICERWFHGKCVRITPAK

Query:  AENIKQYKCPSCSTKRGR
        A+NIKQYKCPSCSTKRGR
Subjt:  AENIKQYKCPSCSTKRGR

XP_038893084.1 PHD finger protein ALFIN-LIKE 2-like [Benincasa hispida]6.7e-6298.31Show/hide
Query:  MINDLPTLFEVASGRKAVKDKPSMDTGSKSRNSTKRSLDGSIRNSNPKLLEESYGEDEDEHGDTLCGSCGGNYNADEFWIGCDICERWFHGKCVRITPAK
        MINDLPTLFEVASGRKAVKDKPSMD+GSKSRNSTKRS+DGSIRNSNPKLLEESYGEDEDEHGDTLCGSCGGNYNADEFWIGCDICERWFHGKCVRITPAK
Subjt:  MINDLPTLFEVASGRKAVKDKPSMDTGSKSRNSTKRSLDGSIRNSNPKLLEESYGEDEDEHGDTLCGSCGGNYNADEFWIGCDICERWFHGKCVRITPAK

Query:  AENIKQYKCPSCSTKRGR
        AENIKQYKCPSCSTKRGR
Subjt:  AENIKQYKCPSCSTKRGR

TrEMBL top hitse value%identityAlignment
A0A0A0KLX6 PHD-type domain-containing protein2.8e-6196.61Show/hide
Query:  MINDLPTLFEVASGRKAVKDKPSMDTGSKSRNSTKRSLDGSIRNSNPKLLEESYGEDEDEHGDTLCGSCGGNYNADEFWIGCDICERWFHGKCVRITPAK
        MINDLPTLFEVASGRKAVKDKPSMD+GSKSRNSTKR+LDGS RNSNPKLLEESYGEDEDEHGDTLCGSCGGNYNADEFWIGCDICE+WFHGKCVRITPAK
Subjt:  MINDLPTLFEVASGRKAVKDKPSMDTGSKSRNSTKRSLDGSIRNSNPKLLEESYGEDEDEHGDTLCGSCGGNYNADEFWIGCDICERWFHGKCVRITPAK

Query:  AENIKQYKCPSCSTKRGR
        AENIKQYKCPSCSTKRGR
Subjt:  AENIKQYKCPSCSTKRGR

A0A1S3CJ59 PHD finger protein ALFIN-LIKE 2-like1.2e-6197.46Show/hide
Query:  MINDLPTLFEVASGRKAVKDKPSMDTGSKSRNSTKRSLDGSIRNSNPKLLEESYGEDEDEHGDTLCGSCGGNYNADEFWIGCDICERWFHGKCVRITPAK
        MINDLPTLFEVASGRKAVKDKPSMD+GSKSRNSTKRSLDGS RNSNPKLLEESYGEDEDEHGDTLCGSCGGNYNADEFWIGCDICERW+HGKCVRITPAK
Subjt:  MINDLPTLFEVASGRKAVKDKPSMDTGSKSRNSTKRSLDGSIRNSNPKLLEESYGEDEDEHGDTLCGSCGGNYNADEFWIGCDICERWFHGKCVRITPAK

Query:  AENIKQYKCPSCSTKRGR
        AENIKQYKCPSCSTKRGR
Subjt:  AENIKQYKCPSCSTKRGR

A0A5D3DUV1 PHD finger protein ALFIN-LIKE 2-like1.2e-6197.46Show/hide
Query:  MINDLPTLFEVASGRKAVKDKPSMDTGSKSRNSTKRSLDGSIRNSNPKLLEESYGEDEDEHGDTLCGSCGGNYNADEFWIGCDICERWFHGKCVRITPAK
        MINDLPTLFEVASGRKAVKDKPSMD+GSKSRNSTKRSLDGS RNSNPKLLEESYGEDEDEHGDTLCGSCGGNYNADEFWIGCDICERW+HGKCVRITPAK
Subjt:  MINDLPTLFEVASGRKAVKDKPSMDTGSKSRNSTKRSLDGSIRNSNPKLLEESYGEDEDEHGDTLCGSCGGNYNADEFWIGCDICERWFHGKCVRITPAK

Query:  AENIKQYKCPSCSTKRGR
        AENIKQYKCPSCSTKRGR
Subjt:  AENIKQYKCPSCSTKRGR

A0A6J1GZB1 PHD finger protein ALFIN-LIKE 2-like2.1e-6196.61Show/hide
Query:  MINDLPTLFEVASGRKAVKDKPSMDTGSKSRNSTKRSLDGSIRNSNPKLLEESYGEDEDEHGDTLCGSCGGNYNADEFWIGCDICERWFHGKCVRITPAK
        MINDLPTLFEVASGRKAVKDKPSMD+GSKSRNSTKRSLDGSIRNSNPKLL+ESYGE+EDEHGDTLCGSCGGNYNADEFWIGCDICERWFHGKCVRITPAK
Subjt:  MINDLPTLFEVASGRKAVKDKPSMDTGSKSRNSTKRSLDGSIRNSNPKLLEESYGEDEDEHGDTLCGSCGGNYNADEFWIGCDICERWFHGKCVRITPAK

Query:  AENIKQYKCPSCSTKRGR
        A+NIKQYKCPSCSTKRGR
Subjt:  AENIKQYKCPSCSTKRGR

A0A6J1J9S6 PHD finger protein ALFIN-LIKE 2-like2.1e-6196.61Show/hide
Query:  MINDLPTLFEVASGRKAVKDKPSMDTGSKSRNSTKRSLDGSIRNSNPKLLEESYGEDEDEHGDTLCGSCGGNYNADEFWIGCDICERWFHGKCVRITPAK
        MINDLPTLFEVASGRKAVKDKPSMD+GSKSRNSTKRSLDGSIRNSNPKLL+ESYGE+EDEHGDTLCGSCGGNYNADEFWIGCDICERWFHGKCVRITPAK
Subjt:  MINDLPTLFEVASGRKAVKDKPSMDTGSKSRNSTKRSLDGSIRNSNPKLLEESYGEDEDEHGDTLCGSCGGNYNADEFWIGCDICERWFHGKCVRITPAK

Query:  AENIKQYKCPSCSTKRGR
        A+NIKQYKCPSCSTKRGR
Subjt:  AENIKQYKCPSCSTKRGR

SwissProt top hitse value%identityAlignment
A2Y0Q2 PHD finger protein ALFIN-LIKE 14.6e-3759.17Show/hide
Query:  MINDLPTLFEVASGRKAVK--DKPSMDTGSKSRNSTKRSLDGSIRNSNPKLLEESYGEDEDEHGDTLCGSCGGNYNADEFWIGCDICERWFHGKCVRITP
        M+NDLPT++EV SG +  K  D+  MD  S+++ S+K + D +   +N K  +E Y ED+ +H +TLCG+CGG Y+ADEFWIGCD+CERW+HGKCV+ITP
Subjt:  MINDLPTLFEVASGRKAVK--DKPSMDTGSKSRNSTKRSLDGSIRNSNPKLLEESYGEDEDEHGDTLCGSCGGNYNADEFWIGCDICERWFHGKCVRITP

Query:  AKAENIKQYKCPSCSTKRGR
        AKAE+IKQYKCPSCS+KR R
Subjt:  AKAENIKQYKCPSCSTKRGR

B8AMA8 PHD finger protein ALFIN-LIKE 37.0e-3858.47Show/hide
Query:  MINDLPTLFEVASGRKAVKDKPSMDTGSKSRNSTKRSLDGSIRNSNPKLLEESYGEDEDEHGDTLCGSCGGNYNADEFWIGCDICERWFHGKCVRITPAK
        MINDLPT++E    RK V+D+  +D+  KS++STKR+ +G ++ S  +++ E Y +D++EH +T CG+CGG YNA+EFWIGCDICERWFHGKCVRITPAK
Subjt:  MINDLPTLFEVASGRKAVKDKPSMDTGSKSRNSTKRSLDGSIRNSNPKLLEESYGEDEDEHGDTLCGSCGGNYNADEFWIGCDICERWFHGKCVRITPAK

Query:  AENIKQYKCPSCSTKRGR
        AE+IK YKCP CS+   +
Subjt:  AENIKQYKCPSCSTKRGR

Q84TV4 PHD finger protein ALFIN-LIKE 37.0e-3858.47Show/hide
Query:  MINDLPTLFEVASGRKAVKDKPSMDTGSKSRNSTKRSLDGSIRNSNPKLLEESYGEDEDEHGDTLCGSCGGNYNADEFWIGCDICERWFHGKCVRITPAK
        MINDLPT++E    RK V+D+  +D+  KS++STKR+ +G ++ S  +++ E Y +D++EH +T CG+CGG YNA+EFWIGCDICERWFHGKCVRITPAK
Subjt:  MINDLPTLFEVASGRKAVKDKPSMDTGSKSRNSTKRSLDGSIRNSNPKLLEESYGEDEDEHGDTLCGSCGGNYNADEFWIGCDICERWFHGKCVRITPAK

Query:  AENIKQYKCPSCSTKRGR
        AE+IK YKCP CS+   +
Subjt:  AENIKQYKCPSCSTKRGR

Q9FFF5 PHD finger protein ALFIN-LIKE 18.9e-4974.79Show/hide
Query:  MINDLPTLFEVASGRKAVKD-KPSMDTGSKSRNSTKRSLDGSIRNSNPKLLEESYGEDEDEHGDTLCGSCGGNYNADEFWIGCDICERWFHGKCVRITPA
        +INDLPTLFEV +GRK +KD KPSMD GSKSRN  KRS++G  + S PKL+EESY +++DEHGDTLCGSCGGNY  DEFWI CD+CERW+HGKCV+ITPA
Subjt:  MINDLPTLFEVASGRKAVKD-KPSMDTGSKSRNSTKRSLDGSIRNSNPKLLEESYGEDEDEHGDTLCGSCGGNYNADEFWIGCDICERWFHGKCVRITPA

Query:  KAENIKQYKCPSCSTKRGR
        KAE+IKQYKCPSC TK+GR
Subjt:  KAENIKQYKCPSCSTKRGR

Q9SRM4 PHD finger protein ALFIN-LIKE 29.8e-4872.73Show/hide
Query:  MINDLPTLFEVASGRKAVKD-KPSMDTGSKSRNSTKRSLDGSIRNSNPKLLEESY--GEDEDEHGDTLCGSCGGNYNADEFWIGCDICERWFHGKCVRIT
        +INDLPTLF+V +GRKA+KD KPS D+GSKSRN TKRS+DG  ++S PKL+EESY   E+EDEHGDTLCGSCGG+Y  +EFWI CD+CERW+HGKCV+IT
Subjt:  MINDLPTLFEVASGRKAVKD-KPSMDTGSKSRNSTKRSLDGSIRNSNPKLLEESY--GEDEDEHGDTLCGSCGGNYNADEFWIGCDICERWFHGKCVRIT

Query:  PAKAENIKQYKCPSCSTKRGR
        PAKAE+IKQYKCP C  K+GR
Subjt:  PAKAENIKQYKCPSCSTKRGR

Arabidopsis top hitse value%identityAlignment
AT3G11200.1 alfin-like 27.0e-4972.73Show/hide
Query:  MINDLPTLFEVASGRKAVKD-KPSMDTGSKSRNSTKRSLDGSIRNSNPKLLEESY--GEDEDEHGDTLCGSCGGNYNADEFWIGCDICERWFHGKCVRIT
        +INDLPTLF+V +GRKA+KD KPS D+GSKSRN TKRS+DG  ++S PKL+EESY   E+EDEHGDTLCGSCGG+Y  +EFWI CD+CERW+HGKCV+IT
Subjt:  MINDLPTLFEVASGRKAVKD-KPSMDTGSKSRNSTKRSLDGSIRNSNPKLLEESY--GEDEDEHGDTLCGSCGGNYNADEFWIGCDICERWFHGKCVRIT

Query:  PAKAENIKQYKCPSCSTKRGR
        PAKAE+IKQYKCP C  K+GR
Subjt:  PAKAENIKQYKCPSCSTKRGR

AT3G11200.2 alfin-like 27.0e-4972.73Show/hide
Query:  MINDLPTLFEVASGRKAVKD-KPSMDTGSKSRNSTKRSLDGSIRNSNPKLLEESY--GEDEDEHGDTLCGSCGGNYNADEFWIGCDICERWFHGKCVRIT
        +INDLPTLF+V +GRKA+KD KPS D+GSKSRN TKRS+DG  ++S PKL+EESY   E+EDEHGDTLCGSCGG+Y  +EFWI CD+CERW+HGKCV+IT
Subjt:  MINDLPTLFEVASGRKAVKD-KPSMDTGSKSRNSTKRSLDGSIRNSNPKLLEESY--GEDEDEHGDTLCGSCGGNYNADEFWIGCDICERWFHGKCVRIT

Query:  PAKAENIKQYKCPSCSTKRGR
        PAKAE+IKQYKCP C  K+GR
Subjt:  PAKAENIKQYKCPSCSTKRGR

AT3G42790.1 alfin-like 34.4e-3558.54Show/hide
Query:  MINDLPTLFEVASGRKAVKDKPSM--DTGSKSRNSTK-RSLDG-SIRNSNPKLLEESYGE-DEDEHGDTLCGSCGGNYNADEFWIGCDICERWFHGKCVR
        MIND+PT+FEV +G    KDK S     G+KS++++K R+ +G S +   PK  +E   E DED+HG+TLCG+CG +  ADEFWI CD+CE+WFHGKCV+
Subjt:  MINDLPTLFEVASGRKAVKDKPSM--DTGSKSRNSTK-RSLDG-SIRNSNPKLLEESYGE-DEDEHGDTLCGSCGGNYNADEFWIGCDICERWFHGKCVR

Query:  ITPAKAENIKQYKCPSCSTKRGR
        ITPA+AE+IKQYKCPSCS KR R
Subjt:  ITPAKAENIKQYKCPSCSTKRGR

AT5G05610.1 alfin-like 16.3e-5074.79Show/hide
Query:  MINDLPTLFEVASGRKAVKD-KPSMDTGSKSRNSTKRSLDGSIRNSNPKLLEESYGEDEDEHGDTLCGSCGGNYNADEFWIGCDICERWFHGKCVRITPA
        +INDLPTLFEV +GRK +KD KPSMD GSKSRN  KRS++G  + S PKL+EESY +++DEHGDTLCGSCGGNY  DEFWI CD+CERW+HGKCV+ITPA
Subjt:  MINDLPTLFEVASGRKAVKD-KPSMDTGSKSRNSTKRSLDGSIRNSNPKLLEESYGEDEDEHGDTLCGSCGGNYNADEFWIGCDICERWFHGKCVRITPA

Query:  KAENIKQYKCPSCSTKRGR
        KAE+IKQYKCPSC TK+GR
Subjt:  KAENIKQYKCPSCSTKRGR

AT5G05610.2 alfin-like 16.3e-5074.79Show/hide
Query:  MINDLPTLFEVASGRKAVKD-KPSMDTGSKSRNSTKRSLDGSIRNSNPKLLEESYGEDEDEHGDTLCGSCGGNYNADEFWIGCDICERWFHGKCVRITPA
        +INDLPTLFEV +GRK +KD KPSMD GSKSRN  KRS++G  + S PKL+EESY +++DEHGDTLCGSCGGNY  DEFWI CD+CERW+HGKCV+ITPA
Subjt:  MINDLPTLFEVASGRKAVKD-KPSMDTGSKSRNSTKRSLDGSIRNSNPKLLEESYGEDEDEHGDTLCGSCGGNYNADEFWIGCDICERWFHGKCVRITPA

Query:  KAENIKQYKCPSCSTKRGR
        KAE+IKQYKCPSC TK+GR
Subjt:  KAENIKQYKCPSCSTKRGR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTAATGATCTACCCACTCTATTTGAAGTTGCATCTGGAAGGAAAGCTGTTAAAGACAAGCCCAGTATGGATACCGGAAGTAAATCCAGAAACAGCACAAAGAGGTC
ACTAGATGGGTCGATTAGAAACAGCAATCCGAAGCTACTTGAAGAGAGTTATGGAGAGGACGAGGATGAGCACGGTGATACGCTCTGTGGGAGTTGTGGTGGGAACTACA
ACGCAGACGAGTTTTGGATTGGATGTGACATCTGTGAGAGGTGGTTCCATGGAAAATGTGTGAGGATAACACCTGCCAAGGCTGAGAATATCAAGCAATACAAATGCCCC
TCTTGCAGCACAAAGAGAGGAAGACCGTAG
mRNA sequenceShow/hide mRNA sequence
ATGATTAATGATCTACCCACTCTATTTGAAGTTGCATCTGGAAGGAAAGCTGTTAAAGACAAGCCCAGTATGGATACCGGAAGTAAATCCAGAAACAGCACAAAGAGGTC
ACTAGATGGGTCGATTAGAAACAGCAATCCGAAGCTACTTGAAGAGAGTTATGGAGAGGACGAGGATGAGCACGGTGATACGCTCTGTGGGAGTTGTGGTGGGAACTACA
ACGCAGACGAGTTTTGGATTGGATGTGACATCTGTGAGAGGTGGTTCCATGGAAAATGTGTGAGGATAACACCTGCCAAGGCTGAGAATATCAAGCAATACAAATGCCCC
TCTTGCAGCACAAAGAGAGGAAGACCGTAG
Protein sequenceShow/hide protein sequence
MINDLPTLFEVASGRKAVKDKPSMDTGSKSRNSTKRSLDGSIRNSNPKLLEESYGEDEDEHGDTLCGSCGGNYNADEFWIGCDICERWFHGKCVRITPAKAENIKQYKCP
SCSTKRGRP