; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10014794 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10014794
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionElf4 domain-containing protein
Genome locationChr02:20055180..20055563
RNA-Seq ExpressionHG10014794
SyntenyHG10014794
Gene Ontology termsGO:0000122 - negative regulation of transcription by RNA polymerase II (biological process)
GO:0009649 - entrainment of circadian clock (biological process)
GO:0009909 - regulation of flower development (biological process)
GO:0010017 - red or far-red light signaling pathway (biological process)
GO:0010114 - response to red light (biological process)
GO:0042753 - positive regulation of circadian rhythm (biological process)
GO:0048573 - photoperiodism, flowering (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005667 - transcription factor complex (cellular component)
GO:0042803 - protein homodimerization activity (molecular function)
InterPro domainsIPR009741 - Protein EARLY FLOWERING 4 domain
IPR040462 - Protein EARLY FLOWERING 4


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031907.1 protein EARLY FLOWERING 4 [Cucumis melo var. makuwa]2.2e-5591.47Show/hide
Query:  MADNNPRRKSKMKPSA--TTTTTTTTSDDGQHDGFPDEYDAEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVSLIQELNGNISKVVSM
        MADNNPRRKSKMKPSA  TTTTTTTTSDD  HD FPDEYDAEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNV+LIQELNGNISKVVSM
Subjt:  MADNNPRRKSKMKPSA--TTTTTTTTSDDGQHDGFPDEYDAEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVSLIQELNGNISKVVSM

Query:  YSDFSSDFSTAFNNHKPRNGKRGSSNPNA
        YSDFSSDFSTAF+NHKPR+GKRG++NP+A
Subjt:  YSDFSSDFSTAFNNHKPRNGKRGSSNPNA

KAG6600929.1 Protein EARLY FLOWERING 4, partial [Cucurbita argyrosperma subsp. sororia]1.6e-5389.92Show/hide
Query:  MADNNPRRKSKMKPSA--TTTTTTTTSDDGQHDGFPDEYDAEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVSLIQELNGNISKVVSM
        MAD NPRRKSK KPSA  TTTTTTTTSDDG+HDGFPDE DA+VWASFDQTFRQVQSVLDRNR LIQQVNENHQSRIPSNMVDNV+LIQELNGNISKVVSM
Subjt:  MADNNPRRKSKMKPSA--TTTTTTTTSDDGQHDGFPDEYDAEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVSLIQELNGNISKVVSM

Query:  YSDFSSDFSTAFNNHKPRNGKRGSSNPNA
        YSDFSSDFS+ FNNHK RNGKRGSSNP+A
Subjt:  YSDFSSDFSTAFNNHKPRNGKRGSSNPNA

XP_004149248.1 protein EARLY FLOWERING 4 [Cucumis sativus]4.2e-5489.92Show/hide
Query:  MADNNPRRKSKMKPSA--TTTTTTTTSDDGQHDGFPDEYDAEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVSLIQELNGNISKVVSM
        MADNNPRRKSKMKPSA  TTTTTTTTSDD  H  FPDEYD EVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNV+LIQELNGNISKVVSM
Subjt:  MADNNPRRKSKMKPSA--TTTTTTTTSDDGQHDGFPDEYDAEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVSLIQELNGNISKVVSM

Query:  YSDFSSDFSTAFNNHKPRNGKRGSSNPNA
        YSDFSSDFSTAF+NHKPR GKRG++NP+A
Subjt:  YSDFSSDFSTAFNNHKPRNGKRGSSNPNA

XP_008463236.2 PREDICTED: uncharacterized protein LOC103501440 [Cucumis melo]2.2e-5591.47Show/hide
Query:  MADNNPRRKSKMKPSA--TTTTTTTTSDDGQHDGFPDEYDAEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVSLIQELNGNISKVVSM
        MADNNPRRKSKMKPSA  TTTTTTTTSDD  HD FPDEYDAEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNV+LIQELNGNISKVVSM
Subjt:  MADNNPRRKSKMKPSA--TTTTTTTTSDDGQHDGFPDEYDAEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVSLIQELNGNISKVVSM

Query:  YSDFSSDFSTAFNNHKPRNGKRGSSNPNA
        YSDFSSDFSTAF+NHKPR+GKRG++NP+A
Subjt:  YSDFSSDFSTAFNNHKPRNGKRGSSNPNA

XP_038892867.1 protein EARLY FLOWERING 4-like [Benincasa hispida]1.5e-5693.13Show/hide
Query:  MADNNPRRKSKMKPSA---TTTTTTTTSDDGQHDG-FPDEYDAEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVSLIQELNGNISKVV
        MADNNPRRKSKMKPSA   TTTTTTTTSDDG HDG FPDEYDAEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNV+LIQELNGNISKVV
Subjt:  MADNNPRRKSKMKPSA---TTTTTTTTSDDGQHDG-FPDEYDAEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVSLIQELNGNISKVV

Query:  SMYSDFSSDFSTAFNNHKPRNGKRGSSNPNA
        SMYSDFSSDFS+AF+NHKPRNGKRGS+NPNA
Subjt:  SMYSDFSSDFSTAFNNHKPRNGKRGSSNPNA

TrEMBL top hitse value%identityAlignment
A0A0A0KM35 Elf4 domain-containing protein2.0e-5489.92Show/hide
Query:  MADNNPRRKSKMKPSA--TTTTTTTTSDDGQHDGFPDEYDAEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVSLIQELNGNISKVVSM
        MADNNPRRKSKMKPSA  TTTTTTTTSDD  H  FPDEYD EVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNV+LIQELNGNISKVVSM
Subjt:  MADNNPRRKSKMKPSA--TTTTTTTTSDDGQHDGFPDEYDAEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVSLIQELNGNISKVVSM

Query:  YSDFSSDFSTAFNNHKPRNGKRGSSNPNA
        YSDFSSDFSTAF+NHKPR GKRG++NP+A
Subjt:  YSDFSSDFSTAFNNHKPRNGKRGSSNPNA

A0A1S3CIT1 uncharacterized protein LOC1035014401.1e-5591.47Show/hide
Query:  MADNNPRRKSKMKPSA--TTTTTTTTSDDGQHDGFPDEYDAEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVSLIQELNGNISKVVSM
        MADNNPRRKSKMKPSA  TTTTTTTTSDD  HD FPDEYDAEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNV+LIQELNGNISKVVSM
Subjt:  MADNNPRRKSKMKPSA--TTTTTTTTSDDGQHDGFPDEYDAEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVSLIQELNGNISKVVSM

Query:  YSDFSSDFSTAFNNHKPRNGKRGSSNPNA
        YSDFSSDFSTAF+NHKPR+GKRG++NP+A
Subjt:  YSDFSSDFSTAFNNHKPRNGKRGSSNPNA

A0A5A7SR92 Protein EARLY FLOWERING 41.1e-5591.47Show/hide
Query:  MADNNPRRKSKMKPSA--TTTTTTTTSDDGQHDGFPDEYDAEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVSLIQELNGNISKVVSM
        MADNNPRRKSKMKPSA  TTTTTTTTSDD  HD FPDEYDAEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNV+LIQELNGNISKVVSM
Subjt:  MADNNPRRKSKMKPSA--TTTTTTTTSDDGQHDGFPDEYDAEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVSLIQELNGNISKVVSM

Query:  YSDFSSDFSTAFNNHKPRNGKRGSSNPNA
        YSDFSSDFSTAF+NHKPR+GKRG++NP+A
Subjt:  YSDFSSDFSTAFNNHKPRNGKRGSSNPNA

A0A6J1GYX8 protein EARLY FLOWERING 4-like5.0e-5389.15Show/hide
Query:  MADNNPRRKSKMKPSA--TTTTTTTTSDDGQHDGFPDEYDAEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVSLIQELNGNISKVVSM
        MAD NPRRKSK KPSA  TTTTTTTTSDDG+HDGFPDE DA+VWASFDQTFRQVQSVLDRNR LIQQVNENHQSRIPSNMVDNV+LIQELNGNISKVVSM
Subjt:  MADNNPRRKSKMKPSA--TTTTTTTTSDDGQHDGFPDEYDAEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVSLIQELNGNISKVVSM

Query:  YSDFSSDFSTAFNNHKPRNGKRGSSNPNA
        YSDFSSDFS+ FNN+K RNGKRGSSNP+A
Subjt:  YSDFSSDFSTAFNNHKPRNGKRGSSNPNA

A0A6J1IH33 protein EARLY FLOWERING 4-like9.5e-5287.6Show/hide
Query:  MADNNPRRKSKMKPSA--TTTTTTTTSDDGQHDGFPDEYDAEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVSLIQELNGNISKVVSM
        MA+ N RRKSK KPSA  TTTTTTTTSDDG+HDGFPDE D +VWASFDQTFRQVQSVLDRNR LIQQVNENHQSRIPSNMVDNV+LIQELNGNISKVVSM
Subjt:  MADNNPRRKSKMKPSA--TTTTTTTTSDDGQHDGFPDEYDAEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVSLIQELNGNISKVVSM

Query:  YSDFSSDFSTAFNNHKPRNGKRGSSNPNA
        YSDFSSDFS+ FNNHK RNGKRGSSNP+A
Subjt:  YSDFSSDFSTAFNNHKPRNGKRGSSNPNA

SwissProt top hitse value%identityAlignment
O04211 Protein EARLY FLOWERING 49.8e-2264.29Show/hide
Query:  DAEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVSLIQELNGNISKVVSMYSDFSSDFSTAFNNHKPRNGKRG
        D  +W + D+ FRQVQSVLDRNR+LIQQVN+NHQSR+  NM  NV+LIQELNGNISKVV+MYSD ++ FS+ F  H  +NG  G
Subjt:  DAEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVSLIQELNGNISKVVSMYSDFSSDFSTAFNNHKPRNGKRG

O80877 Protein ELF4-LIKE 11.2e-1450Show/hide
Query:  DAEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVSLIQELNGNISKVVSMYSDFSSDFSTAFNNHKPRNGKRGSS
        D EVW +    F++ Q  LD+NR LIQ+VNENH SRIP N+  NV LI E+NGNIS+V+ +YSD S +F+  F+  + R  K G +
Subjt:  DAEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVSLIQELNGNISKVVSMYSDFSSDFSTAFNNHKPRNGKRGSS

Q570U6 Protein ELF4-LIKE 44.1e-1246.15Show/hide
Query:  GFPDEY--DAEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVSLIQELNGNISKVVSMYSDFSSDFS
        GF D +  D ++  SF ++F  VQ +LD+NR LI ++N+NH+S+ P N+  NV LI+ELN NI +V S+Y D S  F+
Subjt:  GFPDEY--DAEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVSLIQELNGNISKVVSMYSDFSSDFS

Q8S8F5 Protein ELF4-LIKE 31.1e-1239.33Show/hide
Query:  EYDAEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVSLIQELNGNISKVVSMYSDFSSDFSTAFNNHKPRNGKRGSSN
        + D ++  +F+++F QVQ++LD NR LI ++N+NH+S+IP N+  NV LI+ELN N+ +V  +Y D S++FS +       +   G  N
Subjt:  EYDAEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVSLIQELNGNISKVVSMYSDFSSDFSTAFNNHKPRNGKRGSSN

Q94BS8 Protein ELF4-LIKE 21.0e-1042.5Show/hide
Query:  HDGFPDEY--DAEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVSLIQELNGNISKVVSMYSDFSSDFS
        + GF + Y  D ++  +F ++F QVQ +LD+NR LI ++N+NH+S+   ++  NV LI+ELN NI  V S+Y D S  F+
Subjt:  HDGFPDEY--DAEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVSLIQELNGNISKVVSMYSDFSSDFS

Arabidopsis top hitse value%identityAlignment
AT1G17455.1 ELF4-like 42.9e-1346.15Show/hide
Query:  GFPDEY--DAEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVSLIQELNGNISKVVSMYSDFSSDFS
        GF D +  D ++  SF ++F  VQ +LD+NR LI ++N+NH+S+ P N+  NV LI+ELN NI +V S+Y D S  F+
Subjt:  GFPDEY--DAEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVSLIQELNGNISKVVSMYSDFSSDFS

AT1G17455.2 ELF4-like 42.9e-1346.15Show/hide
Query:  GFPDEY--DAEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVSLIQELNGNISKVVSMYSDFSSDFS
        GF D +  D ++  SF ++F  VQ +LD+NR LI ++N+NH+S+ P N+  NV LI+ELN NI +V S+Y D S  F+
Subjt:  GFPDEY--DAEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVSLIQELNGNISKVVSMYSDFSSDFS

AT2G06255.1 ELF4-like 37.7e-1439.33Show/hide
Query:  EYDAEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVSLIQELNGNISKVVSMYSDFSSDFSTAFNNHKPRNGKRGSSN
        + D ++  +F+++F QVQ++LD NR LI ++N+NH+S+IP N+  NV LI+ELN N+ +V  +Y D S++FS +       +   G  N
Subjt:  EYDAEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVSLIQELNGNISKVVSMYSDFSSDFSTAFNNHKPRNGKRGSSN

AT2G29950.1 ELF4-like 18.3e-1650Show/hide
Query:  DAEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVSLIQELNGNISKVVSMYSDFSSDFSTAFNNHKPRNGKRGSS
        D EVW +    F++ Q  LD+NR LIQ+VNENH SRIP N+  NV LI E+NGNIS+V+ +YSD S +F+  F+  + R  K G +
Subjt:  DAEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVSLIQELNGNISKVVSMYSDFSSDFSTAFNNHKPRNGKRGSS

AT2G40080.1 Protein of unknown function (DUF1313)7.0e-2364.29Show/hide
Query:  DAEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVSLIQELNGNISKVVSMYSDFSSDFSTAFNNHKPRNGKRG
        D  +W + D+ FRQVQSVLDRNR+LIQQVN+NHQSR+  NM  NV+LIQELNGNISKVV+MYSD ++ FS+ F  H  +NG  G
Subjt:  DAEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVSLIQELNGNISKVVSMYSDFSSDFSTAFNNHKPRNGKRG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGATAACAACCCACGCCGCAAATCCAAAATGAAGCCTTCAGCAACCACCACCACCACAACCACCACCAGCGACGACGGCCAACACGACGGCTTCCCTGATGAATA
CGACGCCGAGGTTTGGGCCTCCTTTGACCAGACCTTCCGGCAGGTCCAATCAGTGCTGGATCGGAACAGAACTCTGATTCAACAAGTAAACGAGAATCATCAATCTCGAA
TTCCAAGCAACATGGTCGACAACGTTTCTCTCATTCAAGAACTCAATGGAAACATCTCTAAAGTTGTTTCCATGTACTCTGATTTCTCCTCTGATTTCTCCACTGCCTTC
AATAACCACAAACCCAGAAATGGTAAAAGAGGCAGCAGCAACCCAAATGCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCGATAACAACCCACGCCGCAAATCCAAAATGAAGCCTTCAGCAACCACCACCACCACAACCACCACCAGCGACGACGGCCAACACGACGGCTTCCCTGATGAATA
CGACGCCGAGGTTTGGGCCTCCTTTGACCAGACCTTCCGGCAGGTCCAATCAGTGCTGGATCGGAACAGAACTCTGATTCAACAAGTAAACGAGAATCATCAATCTCGAA
TTCCAAGCAACATGGTCGACAACGTTTCTCTCATTCAAGAACTCAATGGAAACATCTCTAAAGTTGTTTCCATGTACTCTGATTTCTCCTCTGATTTCTCCACTGCCTTC
AATAACCACAAACCCAGAAATGGTAAAAGAGGCAGCAGCAACCCAAATGCTTGA
Protein sequenceShow/hide protein sequence
MADNNPRRKSKMKPSATTTTTTTTSDDGQHDGFPDEYDAEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVSLIQELNGNISKVVSMYSDFSSDFSTAF
NNHKPRNGKRGSSNPNA