; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10014832 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10014832
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionCCHC-type domain-containing protein
Genome locationChr02:20623364..20624380
RNA-Seq ExpressionHG10014832
SyntenyHG10014832
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001878 - Zinc finger, CCHC-type
IPR025558 - Domain of unknown function DUF4283
IPR025836 - Zinc knuckle CX2CX4HX4C
IPR040256 - Uncharacterized protein At4g02000-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TXG50019.1 hypothetical protein EZV62_025894 [Acer yangbiense]3.6e-2839.38Show/hide
Query:  VLKLGPWLFDSSLLVVEDPKANVKLSKLSFDKVAFWIRLMDIPLSFQNRFMAKNLGDALCKFLEVDCDQEKFYWGGGGG---GESLHIKVMMDITKPLRR
        VL+ GPW FD +LLV+E+P     + ++ FDKVAFWI++  +PL      + + LG  + +  E+D         GG G   G+ + ++V++D+TKPLRR
Subjt:  VLKLGPWLFDSSLLVVEDPKANVKLSKLSFDKVAFWIRLMDIPLSFQNRFMAKNLGDALCKFLEVDCDQEKFYWGGGGG---GESLHIKVMMDITKPLRR

Query:  GIWIEPGGDQEKQWINVKYERLPDFCYGCGRIGHVIKICNFVIDVVDSDPEAWQYGSWLR
         + ++  GD ++  + ++YERLPD CY CGRIGHV++ C+ V   V+ +     +GSWLR
Subjt:  GIWIEPGGDQEKQWINVKYERLPDFCYGCGRIGHVIKICNFVIDVVDSDPEAWQYGSWLR

XP_021749726.1 uncharacterized protein LOC110715454 [Chenopodium quinoa]6.9e-2737.79Show/hide
Query:  MVLKLGPWLFDSSLLVVEDPKANVKLSKLSFDKVAFWIRLMDIPLSFQNRFMAKNLGDALCKFLEVDCDQEKFYWGGGGGGESLHIKVMMDITKPLRRGI
        MVL   PW FD  L+V+ +     + S++ F     W+RL+D+P S +N+     +GD L  FLE+D D +   W     GE + +KVM+D+ KPLRRG+
Subjt:  MVLKLGPWLFDSSLLVVEDPKANVKLSKLSFDKVAFWIRLMDIPLSFQNRFMAKNLGDALCKFLEVDCDQEKFYWGGGGGGESLHIKVMMDITKPLRRGI

Query:  WIEPGGDQEKQWINVKYERLPDFCYGCGRIGHVIKICNFVIDVVDSDPE-AWQYGSWLRFQESNPRKRRKSP
        ++  G    K W+ +KYERL +FC+ CGR+ H    C++  +  +++ E  +QYG WLR   ++PRK  + P
Subjt:  WIEPGGDQEKQWINVKYERLPDFCYGCGRIGHVIKICNFVIDVVDSDPE-AWQYGSWLRFQESNPRKRRKSP

XP_022132681.1 uncharacterized protein LOC111005481 [Momordica charantia]3.3e-2938.99Show/hide
Query:  VLKLGPWLFDSSLLVVEDPKANVKLSKLSFDKVAFWIRLMDIPLSFQNRFMAKNLGDALCKFLEVDCDQEKFYWGGGGGGESLHIKVMMDITKPLRRGIW
        +L++GPW FD +L+++++P +  K   + F  V+ W+   D+ L+  N+ MA  LG+A+  F +V+ +   F W     G  L ++V  D+ KPL RGI 
Subjt:  VLKLGPWLFDSSLLVVEDPKANVKLSKLSFDKVAFWIRLMDIPLSFQNRFMAKNLGDALCKFLEVDCDQEKFYWGGGGGGESLHIKVMMDITKPLRRGIW

Query:  IEPGGDQEKQWINVKYERLPDFCYGCGRIGHVIKICNFVIDVVDSDPEAWQYGSWLRFQ
        +   G     WI ++YERLPDF Y CGR+ H++K C+     VDS  +  QYG WLRFQ
Subjt:  IEPGGDQEKQWINVKYERLPDFCYGCGRIGHVIKICNFVIDVVDSDPEAWQYGSWLRFQ

XP_022156185.1 uncharacterized protein LOC111023135 [Momordica charantia]5.6e-3744.68Show/hide
Query:  VLKLGPWLFDSSLLVVEDPKANVKLSKLSFDKVAFWIRLMDIPLSFQNRFMAKNLGDALCKFLEVDCDQEKFYWGGGGGGESLHIKVMMDITKPLRRGIW
        V+K GPW FD +L+V++ P ++  +S+L F++VAFWI L D+P+S+ N+ MA  LG+A+  F++VDC+++ F WG      SL I+V++DITKPLRRGI 
Subjt:  VLKLGPWLFDSSLLVVEDPKANVKLSKLSFDKVAFWIRLMDIPLSFQNRFMAKNLGDALCKFLEVDCDQEKFYWGGGGGGESLHIKVMMDITKPLRRGIW

Query:  IEPGGDQEKQWINVKYERLPDFCYGCGRIGHVIKICNFVIDVVDSDPEAW-QYGSWLRFQES----NPRKRRKSPQRNEKEGSHAESS
        I   G     WI ++YERLPDFCY CG IGH    C+        D  A  +YG WLRF  S       ++ KSP R +  GS + +S
Subjt:  IEPGGDQEKQWINVKYERLPDFCYGCGRIGHVIKICNFVIDVVDSDPEAW-QYGSWLRFQES----NPRKRRKSPQRNEKEGSHAESS

XP_022158377.1 uncharacterized protein LOC111024874 [Momordica charantia]2.4e-2737.21Show/hide
Query:  VLKLGPWLFDSSLLVVEDPKANVKLSKLSFDKVAFWIRLMDIPLSFQNRFMAKNLGDALCKFLEVDCDQEKFYWGGGGGGESLHIKVMMDITKPLRRGIW
        + K GPW FD +L+++  P A +  S+L F K+  W+R  D+PL    R MA  LG+AL  F E DCD     W     G +L ++VM+DI+KPLRRGI 
Subjt:  VLKLGPWLFDSSLLVVEDPKANVKLSKLSFDKVAFWIRLMDIPLSFQNRFMAKNLGDALCKFLEVDCDQEKFYWGGGGGGESLHIKVMMDITKPLRRGIW

Query:  IEPGGDQEKQWINVKYERLPDFCYGCGRIGHVIKICNFVIDVVDSDPEAWQYGSWLRFQESNPRKRRKSPQRNEKEGSHAESSAFQTENSPQKENLGKSS
        +   G     WI ++YERLPDFCY CG               + S  +  QYGSWLR+Q +    +   PQ  +                PQ++ L KS 
Subjt:  IEPGGDQEKQWINVKYERLPDFCYGCGRIGHVIKICNFVIDVVDSDPEAWQYGSWLRFQESNPRKRRKSPQRNEKEGSHAESSAFQTENSPQKENLGKSS

Query:  KISNTKSTSAVSKGN
          S + STS V  G+
Subjt:  KISNTKSTSAVSKGN

TrEMBL top hitse value%identityAlignment
A0A5C7GZQ4 CCHC-type domain-containing protein1.8e-2839.38Show/hide
Query:  VLKLGPWLFDSSLLVVEDPKANVKLSKLSFDKVAFWIRLMDIPLSFQNRFMAKNLGDALCKFLEVDCDQEKFYWGGGGG---GESLHIKVMMDITKPLRR
        VL+ GPW FD +LLV+E+P     + ++ FDKVAFWI++  +PL      + + LG  + +  E+D         GG G   G+ + ++V++D+TKPLRR
Subjt:  VLKLGPWLFDSSLLVVEDPKANVKLSKLSFDKVAFWIRLMDIPLSFQNRFMAKNLGDALCKFLEVDCDQEKFYWGGGGG---GESLHIKVMMDITKPLRR

Query:  GIWIEPGGDQEKQWINVKYERLPDFCYGCGRIGHVIKICNFVIDVVDSDPEAWQYGSWLR
         + ++  GD ++  + ++YERLPD CY CGRIGHV++ C+ V   V+ +     +GSWLR
Subjt:  GIWIEPGGDQEKQWINVKYERLPDFCYGCGRIGHVIKICNFVIDVVDSDPEAWQYGSWLR

A0A6J1BSZ1 uncharacterized protein LOC1110054811.6e-2938.99Show/hide
Query:  VLKLGPWLFDSSLLVVEDPKANVKLSKLSFDKVAFWIRLMDIPLSFQNRFMAKNLGDALCKFLEVDCDQEKFYWGGGGGGESLHIKVMMDITKPLRRGIW
        +L++GPW FD +L+++++P +  K   + F  V+ W+   D+ L+  N+ MA  LG+A+  F +V+ +   F W     G  L ++V  D+ KPL RGI 
Subjt:  VLKLGPWLFDSSLLVVEDPKANVKLSKLSFDKVAFWIRLMDIPLSFQNRFMAKNLGDALCKFLEVDCDQEKFYWGGGGGGESLHIKVMMDITKPLRRGIW

Query:  IEPGGDQEKQWINVKYERLPDFCYGCGRIGHVIKICNFVIDVVDSDPEAWQYGSWLRFQ
        +   G     WI ++YERLPDF Y CGR+ H++K C+     VDS  +  QYG WLRFQ
Subjt:  IEPGGDQEKQWINVKYERLPDFCYGCGRIGHVIKICNFVIDVVDSDPEAWQYGSWLRFQ

A0A6J1DU55 uncharacterized protein LOC1110231352.7e-3744.68Show/hide
Query:  VLKLGPWLFDSSLLVVEDPKANVKLSKLSFDKVAFWIRLMDIPLSFQNRFMAKNLGDALCKFLEVDCDQEKFYWGGGGGGESLHIKVMMDITKPLRRGIW
        V+K GPW FD +L+V++ P ++  +S+L F++VAFWI L D+P+S+ N+ MA  LG+A+  F++VDC+++ F WG      SL I+V++DITKPLRRGI 
Subjt:  VLKLGPWLFDSSLLVVEDPKANVKLSKLSFDKVAFWIRLMDIPLSFQNRFMAKNLGDALCKFLEVDCDQEKFYWGGGGGGESLHIKVMMDITKPLRRGIW

Query:  IEPGGDQEKQWINVKYERLPDFCYGCGRIGHVIKICNFVIDVVDSDPEAW-QYGSWLRFQES----NPRKRRKSPQRNEKEGSHAESS
        I   G     WI ++YERLPDFCY CG IGH    C+        D  A  +YG WLRF  S       ++ KSP R +  GS + +S
Subjt:  IEPGGDQEKQWINVKYERLPDFCYGCGRIGHVIKICNFVIDVVDSDPEAW-QYGSWLRFQES----NPRKRRKSPQRNEKEGSHAESS

A0A6J1DX30 uncharacterized protein LOC1110248741.1e-2737.21Show/hide
Query:  VLKLGPWLFDSSLLVVEDPKANVKLSKLSFDKVAFWIRLMDIPLSFQNRFMAKNLGDALCKFLEVDCDQEKFYWGGGGGGESLHIKVMMDITKPLRRGIW
        + K GPW FD +L+++  P A +  S+L F K+  W+R  D+PL    R MA  LG+AL  F E DCD     W     G +L ++VM+DI+KPLRRGI 
Subjt:  VLKLGPWLFDSSLLVVEDPKANVKLSKLSFDKVAFWIRLMDIPLSFQNRFMAKNLGDALCKFLEVDCDQEKFYWGGGGGGESLHIKVMMDITKPLRRGIW

Query:  IEPGGDQEKQWINVKYERLPDFCYGCGRIGHVIKICNFVIDVVDSDPEAWQYGSWLRFQESNPRKRRKSPQRNEKEGSHAESSAFQTENSPQKENLGKSS
        +   G     WI ++YERLPDFCY CG               + S  +  QYGSWLR+Q +    +   PQ  +                PQ++ L KS 
Subjt:  IEPGGDQEKQWINVKYERLPDFCYGCGRIGHVIKICNFVIDVVDSDPEAWQYGSWLRFQESNPRKRRKSPQRNEKEGSHAESSAFQTENSPQKENLGKSS

Query:  KISNTKSTSAVSKGN
          S + STS V  G+
Subjt:  KISNTKSTSAVSKGN

A0A803LAB8 Uncharacterized protein1.1e-2741.04Show/hide
Query:  PWLFDSSLLVVEDPKANVKLSKLSFDKVAFWIRLMDIPLSFQNRFMAKNLGDALCKFLEVDCDQEKFYWGGGGGGESLHIKVMMDITKPLRRGIWIEPGG
        PW FD  LLV+++ K   + S++ F     W+RL+D+P + +N+     +GD L  FLE D D +   W     GE L IKVM+DI KPLRRG+++  G 
Subjt:  PWLFDSSLLVVEDPKANVKLSKLSFDKVAFWIRLMDIPLSFQNRFMAKNLGDALCKFLEVDCDQEKFYWGGGGGGESLHIKVMMDITKPLRRGIWIEPGG

Query:  DQEKQWINVKYERLPDFCYGCGRIGHVIKICNFVIDVVDSDPE-AWQYGSWLRFQESNPRKR-RKSPQRNEKE
           K W+ +KYERL +FC+ CGR+ H    C+F  +  + + +  +QYG WLR   ++PRK+ RKS    EKE
Subjt:  DQEKQWINVKYERLPDFCYGCGRIGHVIKICNFVIDVVDSDPE-AWQYGSWLRFQESNPRKR-RKSPQRNEKE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTCTAAAACTTGGCCCTTGGCTTTTCGACAGTTCTTTACTGGTGGTGGAAGACCCAAAAGCTAATGTCAAATTATCCAAACTTTCTTTTGATAAAGTGGCATTCTG
GATTCGTCTAATGGATATTCCACTAAGTTTCCAAAATAGATTCATGGCTAAAAATTTAGGAGATGCTTTATGCAAATTCTTAGAAGTTGACTGTGATCAAGAAAAATTTT
ACTGGGGGGGGGGGGGGGGGGGAGAGAGTTTGCATATCAAAGTTATGATGGATATCACAAAACCCTTAAGAAGAGGAATCTGGATTGAACCAGGAGGAGATCAAGAAAAA
CAATGGATTAATGTTAAATATGAAAGGTTGCCTGATTTCTGTTATGGTTGTGGCAGAATTGGTCATGTAATCAAGATTTGCAATTTTGTAATAGATGTTGTTGATTCTGA
TCCTGAAGCTTGGCAATATGGGAGTTGGTTGAGATTTCAAGAGAGTAATCCAAGAAAGCGTAGAAAGAGTCCTCAAAGAAACGAGAAAGAAGGTTCCCATGCTGAATCCT
CAGCCTTCCAAACAGAAAATTCTCCACAAAAAGAAAATCTTGGCAAATCCTCAAAGATCTCAAACACAAAATCAACCTCTGCTGTCAGCAAAGGGAATCTTGATCCAAAC
TTTCTGAACTCAAATTCTGTTTTCGACCTCAACATAGGACCTCCGGATAGTGAGCCCTTTAAAGGAAATCAAGAAACCTCTCACTGGTTCAATGACTCTCAACAATCTCA
TAAGACAGTGGCGGTTGAACTACAGAATGAGACAATTTTAGATCCTAATGAAGAACATACGGGAAACAAGGTTTCAATTGGAAAAAAGCCAAAAGATTGGAAAAGAAGGA
CCAGGTCTGATTCTAGATTCTCAAATCACTCTATGAAAACACAATATGAGCAGAAGAGAAAGGGAGTGCCTTTGTTCAATCCTTCAGAGTTCAAGAAAAAAAGGGAAACC
TCTTACCTGTATTCAGGAATGAAATAG
mRNA sequenceShow/hide mRNA sequence
ATGGTTCTAAAACTTGGCCCTTGGCTTTTCGACAGTTCTTTACTGGTGGTGGAAGACCCAAAAGCTAATGTCAAATTATCCAAACTTTCTTTTGATAAAGTGGCATTCTG
GATTCGTCTAATGGATATTCCACTAAGTTTCCAAAATAGATTCATGGCTAAAAATTTAGGAGATGCTTTATGCAAATTCTTAGAAGTTGACTGTGATCAAGAAAAATTTT
ACTGGGGGGGGGGGGGGGGGGGAGAGAGTTTGCATATCAAAGTTATGATGGATATCACAAAACCCTTAAGAAGAGGAATCTGGATTGAACCAGGAGGAGATCAAGAAAAA
CAATGGATTAATGTTAAATATGAAAGGTTGCCTGATTTCTGTTATGGTTGTGGCAGAATTGGTCATGTAATCAAGATTTGCAATTTTGTAATAGATGTTGTTGATTCTGA
TCCTGAAGCTTGGCAATATGGGAGTTGGTTGAGATTTCAAGAGAGTAATCCAAGAAAGCGTAGAAAGAGTCCTCAAAGAAACGAGAAAGAAGGTTCCCATGCTGAATCCT
CAGCCTTCCAAACAGAAAATTCTCCACAAAAAGAAAATCTTGGCAAATCCTCAAAGATCTCAAACACAAAATCAACCTCTGCTGTCAGCAAAGGGAATCTTGATCCAAAC
TTTCTGAACTCAAATTCTGTTTTCGACCTCAACATAGGACCTCCGGATAGTGAGCCCTTTAAAGGAAATCAAGAAACCTCTCACTGGTTCAATGACTCTCAACAATCTCA
TAAGACAGTGGCGGTTGAACTACAGAATGAGACAATTTTAGATCCTAATGAAGAACATACGGGAAACAAGGTTTCAATTGGAAAAAAGCCAAAAGATTGGAAAAGAAGGA
CCAGGTCTGATTCTAGATTCTCAAATCACTCTATGAAAACACAATATGAGCAGAAGAGAAAGGGAGTGCCTTTGTTCAATCCTTCAGAGTTCAAGAAAAAAAGGGAAACC
TCTTACCTGTATTCAGGAATGAAATAG
Protein sequenceShow/hide protein sequence
MVLKLGPWLFDSSLLVVEDPKANVKLSKLSFDKVAFWIRLMDIPLSFQNRFMAKNLGDALCKFLEVDCDQEKFYWGGGGGGESLHIKVMMDITKPLRRGIWIEPGGDQEK
QWINVKYERLPDFCYGCGRIGHVIKICNFVIDVVDSDPEAWQYGSWLRFQESNPRKRRKSPQRNEKEGSHAESSAFQTENSPQKENLGKSSKISNTKSTSAVSKGNLDPN
FLNSNSVFDLNIGPPDSEPFKGNQETSHWFNDSQQSHKTVAVELQNETILDPNEEHTGNKVSIGKKPKDWKRRTRSDSRFSNHSMKTQYEQKRKGVPLFNPSEFKKKRET
SYLYSGMK