; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10014842 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10014842
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionSHSP domain-containing protein
Genome locationChr02:20746381..20746851
RNA-Seq ExpressionHG10014842
SyntenyHG10014842
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
BAS70261.1 Os01g0136050, partial [Oryza sativa Japonica Group]2.6e-2960.13Show/hide
Query:  MDLISGFFSSTFGTVTVRTPFSILAFTSSTLAFSGSLNLLMNFPLLRSILCHLSFFSSCSLLLSPLICKTLPSSTSTLTSCLLIPGRSAVKMWACGVSFQ
        M   SGF +S  GTVTV TPFS+LAFT STLAFSGSLN  MN PLLRS  CHLSF SS SLL  PLI  TLPSSTST TS  L PGRSA+K    GVSFQ
Subjt:  MDLISGFFSSTFGTVTVRTPFSILAFTSSTLAFSGSLNLLMNFPLLRSILCHLSFFSSCSLLLSPLICKTLPSSTSTLTSCLLIPGRSAVKMWACGVSFQ

Query:  SMRVLAKAEISGAEEGRLASEFENENPWNGSQTSNENGSKMLLRRPPKMLGIS
        S R LAKA +S +E   +A   E + P  GSQ S   GS  LLR    ++G+S
Subjt:  SMRVLAKAEISGAEEGRLASEFENENPWNGSQTSNENGSKMLLRRPPKMLGIS

CAB3496390.1 unnamed protein product [Digitaria exilis]5.2e-3059.09Show/hide
Query:  MDLISGFFSSTFGTVTVRTPFSILAFTSSTLAFSGSLNLLMNFPLLRSILCHLSFFSSCSLLLSPLICKTLPSSTSTLTSCLLIPGRSAVKMWACGVSFQ
        M L SGF +S+ GTVTV TPFS+ A   S LAFSGSLNL  N PLLRS  CH SFFSS SLL SPLI +TLPSS ST TS    PG SA+K WA GVSFQ
Subjt:  MDLISGFFSSTFGTVTVRTPFSILAFTSSTLAFSGSLNLLMNFPLLRSILCHLSFFSSCSLLLSPLICKTLPSSTSTLTSCLLIPGRSAVKMWACGVSFQ

Query:  SMRVLAKAEISGAEE---GRLASEFENENPWNGSQTSNENGSKMLLRRPPKMLG
        SMR  A A +S + E    RL     N   W GSQ S E GS  LLRR   M+G
Subjt:  SMRVLAKAEISGAEE---GRLASEFENENPWNGSQTSNENGSKMLLRRPPKMLG

CAG1834096.1 unnamed protein product [Musa acuminata subsp. malaccensis]2.8e-3157.5Show/hide
Query:  MDLISGFFSSTFGTVTVRTPFSILAFTSSTLAFSGSLNLLMNFPLLRSILCHLSFFSSCSLLLSPLICKTLPSSTSTLTSCLLIPGRSAVKMWACGVSFQ
        MDL SGF + + GTVTV TPFS+ AFT STLAFSG  NL  N PLLRS  C +S FSSCS L SPLI +T PSSTST+TS  L PG+SA+   A GVSFQ
Subjt:  MDLISGFFSSTFGTVTVRTPFSILAFTSSTLAFSGSLNLLMNFPLLRSILCHLSFFSSCSLLLSPLICKTLPSSTSTLTSCLLIPGRSAVKMWACGVSFQ

Query:  SMRVLAKAEISGAEEGRLASEFENE----NPWNGSQTSNENGSKMLLRRPPKMLGISDMV
        S R  A A+   A  G +A E E E     PW GSQ S E GSKM  RR P   G+SD++
Subjt:  SMRVLAKAEISGAEEGRLASEFENE----NPWNGSQTSNENGSKMLLRRPPKMLGISDMV

KVI11914.1 hypothetical protein Ccrd_009654, partial [Cynara cardunculus var. scolymus]2.9e-3664.9Show/hide
Query:  SGFFSSTFGTVTVRTPFSILAFTSSTLAFSGSLNLLMNFPLLRSILCHLSFFSSCSLLLSPLICKTLPSSTSTLTSCLLIPGRSAVKMWACGVSFQSMRV
        +GFF+S+FGTV V TPFSI AFT S  AFSG+LNLL+NFPLLRS LCH+SF SS S  LSPLICK L SSTST TS  LIPGRSA+K  A GVSFQS RV
Subjt:  SGFFSSTFGTVTVRTPFSILAFTSSTLAFSGSLNLLMNFPLLRSILCHLSFFSSCSLLLSPLICKTLPSSTSTLTSCLLIPGRSAVKMWACGVSFQSMRV

Query:  LAKAEISGAEEGRLASEFENENPWNGSQTSNENGSKMLLRRPPKMLGISDM
          KAE+S  E      E       NGSQ S  NGSKML RRPPK LG+ D+
Subjt:  LAKAEISGAEEGRLASEFENENPWNGSQTSNENGSKMLLRRPPKMLGISDM

VFQ82571.1 unnamed protein product [Cuscuta campestris]1.7e-3662.42Show/hide
Query:  MDLISGFFSSTFGTVTVRTPFSILAFTSSTLAFSGSLNLLMNFPLLRSILCHLSFFSSCSLLLSPLICKTLPSSTSTLTSCLLIPGRSAVKMWACGVSFQ
        MDL SGFF+S+ GTVTV TPFS+ AFT S  AFSGS N   N PLLRS  CHLS FSS SLLLSPLICK LPSSTST TS    PGRSA+  W  GVSFQ
Subjt:  MDLISGFFSSTFGTVTVRTPFSILAFTSSTLAFSGSLNLLMNFPLLRSILCHLSFFSSCSLLLSPLICKTLPSSTSTLTSCLLIPGRSAVKMWACGVSFQ

Query:  SMRVLAKAEISGAEEGRLASEFENENPWNGSQTSNENGSKMLLR-RPPKMLGISDMV
        S+R  A A++S      + + FEN NPW GSQ S ENGS   LR RPPK LGI +++
Subjt:  SMRVLAKAEISGAEEGRLASEFENENPWNGSQTSNENGSKMLLR-RPPKMLGISDMV

TrEMBL top hitse value%identityAlignment
A0A0A0KSC0 Uncharacterized protein8.0e-6185.26Show/hide
Query:  MDLISGFFSSTFGTVTVRTPFSILAFTSSTLAFSGSLNLLMNFPLLRSILCHLSFFSSCSLLLSPLICKTLPSSTSTLTSCLLIPGRSAVKMWACGVSFQ
        MDLISGFFSS  GT+TVRTPFS+LAFTSSTLAFSGSLNLLMNFP LRSILCHLSFFSSCSLLLSPLICKTLPSSTSTLTS  LIPGRSA+KMWACGVSFQ
Subjt:  MDLISGFFSSTFGTVTVRTPFSILAFTSSTLAFSGSLNLLMNFPLLRSILCHLSFFSSCSLLLSPLICKTLPSSTSTLTSCLLIPGRSAVKMWACGVSFQ

Query:  SMRVLAKAEISGAEEGRLASEFENENPWNGSQTSNENGSKMLLRRPPKMLGISDMV
        SMRVLAKAE+S AEEG LA EFE   P  GSQ SNE GSK LLRRPPKMLG   MV
Subjt:  SMRVLAKAEISGAEEGRLASEFENENPWNGSQTSNENGSKMLLRRPPKMLGISDMV

A0A0P0UXN9 Os01g0136050 protein (Fragment)1.3e-2960.13Show/hide
Query:  MDLISGFFSSTFGTVTVRTPFSILAFTSSTLAFSGSLNLLMNFPLLRSILCHLSFFSSCSLLLSPLICKTLPSSTSTLTSCLLIPGRSAVKMWACGVSFQ
        M   SGF +S  GTVTV TPFS+LAFT STLAFSGSLN  MN PLLRS  CHLSF SS SLL  PLI  TLPSSTST TS  L PGRSA+K    GVSFQ
Subjt:  MDLISGFFSSTFGTVTVRTPFSILAFTSSTLAFSGSLNLLMNFPLLRSILCHLSFFSSCSLLLSPLICKTLPSSTSTLTSCLLIPGRSAVKMWACGVSFQ

Query:  SMRVLAKAEISGAEEGRLASEFENENPWNGSQTSNENGSKMLLRRPPKMLGIS
        S R LAKA +S +E   +A   E + P  GSQ S   GS  LLR    ++G+S
Subjt:  SMRVLAKAEISGAEEGRLASEFENENPWNGSQTSNENGSKMLLRRPPKMLGIS

A0A103YMN4 Uncharacterized protein (Fragment)1.4e-3664.9Show/hide
Query:  SGFFSSTFGTVTVRTPFSILAFTSSTLAFSGSLNLLMNFPLLRSILCHLSFFSSCSLLLSPLICKTLPSSTSTLTSCLLIPGRSAVKMWACGVSFQSMRV
        +GFF+S+FGTV V TPFSI AFT S  AFSG+LNLL+NFPLLRS LCH+SF SS S  LSPLICK L SSTST TS  LIPGRSA+K  A GVSFQS RV
Subjt:  SGFFSSTFGTVTVRTPFSILAFTSSTLAFSGSLNLLMNFPLLRSILCHLSFFSSCSLLLSPLICKTLPSSTSTLTSCLLIPGRSAVKMWACGVSFQSMRV

Query:  LAKAEISGAEEGRLASEFENENPWNGSQTSNENGSKMLLRRPPKMLGISDM
          KAE+S  E      E       NGSQ S  NGSKML RRPPK LG+ D+
Subjt:  LAKAEISGAEEGRLASEFENENPWNGSQTSNENGSKMLLRRPPKMLGISDM

A0A484M1B1 Uncharacterized protein8.1e-3762.42Show/hide
Query:  MDLISGFFSSTFGTVTVRTPFSILAFTSSTLAFSGSLNLLMNFPLLRSILCHLSFFSSCSLLLSPLICKTLPSSTSTLTSCLLIPGRSAVKMWACGVSFQ
        MDL SGFF+S+ GTVTV TPFS+ AFT S  AFSGS N   N PLLRS  CHLS FSS SLLLSPLICK LPSSTST TS    PGRSA+  W  GVSFQ
Subjt:  MDLISGFFSSTFGTVTVRTPFSILAFTSSTLAFSGSLNLLMNFPLLRSILCHLSFFSSCSLLLSPLICKTLPSSTSTLTSCLLIPGRSAVKMWACGVSFQ

Query:  SMRVLAKAEISGAEEGRLASEFENENPWNGSQTSNENGSKMLLR-RPPKMLGISDMV
        S+R  A A++S      + + FEN NPW GSQ S ENGS   LR RPPK LGI +++
Subjt:  SMRVLAKAEISGAEEGRLASEFENENPWNGSQTSNENGSKMLLR-RPPKMLGISDMV

A0A7C9D9Y3 Uncharacterized protein1.1e-3864.97Show/hide
Query:  MDLISGFFSSTFGTVTVRTPFSILAFTSSTLAFSGSLNLLMNFPLLRSILCHLSFFSSCSLLLSPLICKTLPSSTSTLTSCLLIPGRSAVKMWACGVSFQ
        M   SGFFSST GTVTV TPFSI AFTSS LAFSG  N   N PL RS  CHLSFFSSCSL+LSPLI + LPSSTST TS  L PGRS +  WA GVSFQ
Subjt:  MDLISGFFSSTFGTVTVRTPFSILAFTSSTLAFSGSLNLLMNFPLLRSILCHLSFFSSCSLLLSPLICKTLPSSTSTLTSCLLIPGRSAVKMWACGVSFQ

Query:  SMRVLAKAEIS-GAEEGRLASEFENENPWNGSQTSNENGSKMLLRRPPKMLGISDMV
        S  VL   ++S  AE G      E++NP NGSQTS ENGS  L+ R PK LGISDMV
Subjt:  SMRVLAKAEIS-GAEEGRLASEFENENPWNGSQTSNENGSKMLLRRPPKMLGISDMV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACCTGATTTCAGGCTTCTTCTCTTCCACTTTTGGTACTGTCACAGTCAGAACTCCATTCTCCATACTGGCTTTCACTTCTTCAACCTTGGCATTCTCGGGCAGCCT
GAATCTCCTCATGAACTTCCCACTGCTTCGTTCAATCCTATGCCATTTGTCGTTCTTCTCTTCCTGTTCTTTGCTTCTCTCTCCACTGATCTGCAAAACTCTGCCTTCTT
CAACCTCAACTTTGACTTCTTGTTTGTTGATTCCGGGGAGATCGGCTGTGAAGATGTGGGCTTGTGGGGTCTCCTTCCAGTCGATGCGAGTGTTGGCAAAAGCAGAGATT
TCAGGAGCAGAGGAAGGACGATTAGCCAGTGAGTTTGAGAATGAAAATCCATGGAATGGATCCCAAACATCTAATGAAAATGGGTCAAAGATGTTGCTCCGGCGACCACC
AAAAATGCTTGGAATCAGTGACATGGTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGACCTGATTTCAGGCTTCTTCTCTTCCACTTTTGGTACTGTCACAGTCAGAACTCCATTCTCCATACTGGCTTTCACTTCTTCAACCTTGGCATTCTCGGGCAGCCT
GAATCTCCTCATGAACTTCCCACTGCTTCGTTCAATCCTATGCCATTTGTCGTTCTTCTCTTCCTGTTCTTTGCTTCTCTCTCCACTGATCTGCAAAACTCTGCCTTCTT
CAACCTCAACTTTGACTTCTTGTTTGTTGATTCCGGGGAGATCGGCTGTGAAGATGTGGGCTTGTGGGGTCTCCTTCCAGTCGATGCGAGTGTTGGCAAAAGCAGAGATT
TCAGGAGCAGAGGAAGGACGATTAGCCAGTGAGTTTGAGAATGAAAATCCATGGAATGGATCCCAAACATCTAATGAAAATGGGTCAAAGATGTTGCTCCGGCGACCACC
AAAAATGCTTGGAATCAGTGACATGGTTTAG
Protein sequenceShow/hide protein sequence
MDLISGFFSSTFGTVTVRTPFSILAFTSSTLAFSGSLNLLMNFPLLRSILCHLSFFSSCSLLLSPLICKTLPSSTSTLTSCLLIPGRSAVKMWACGVSFQSMRVLAKAEI
SGAEEGRLASEFENENPWNGSQTSNENGSKMLLRRPPKMLGISDMV