; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10014910 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10014910
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Descriptionserine/arginine-rich SC35-like splicing factor SCL30
Genome locationChr02:21709828..21713983
RNA-Seq ExpressionHG10014910
SyntenyHG10014910
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6601004.1 Serine/arginine-rich SC35-like splicing factor SCL30, partial [Cucurbita argyrosperma subsp. sororia]1.3e-10083.67Show/hide
Query:  MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGGYGRRREQPHGSLLVRNIPMDC--------------------------SDPRGFAFVEFVDPY
        MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGGYGRRREQPHGSLLVRNIPMDC                            PRGFAFVEFVDPY
Subjt:  MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGGYGRRREQPHGSLLVRNIPMDC--------------------------SDPRGFAFVEFVDPY

Query:  EASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSHYGRSRSRSVSRSRSPRHPSGSRSRYRSRSYSPAPRWRGDYSVSPGRRHA
        EASEAQYHMNGKKFAGREI VVLAAESRKRPEQMRQRSRRGPS YGGRRS+YGRSRSRSVSRSRSPRHPSGSRSR+RSRSYSPAPRWRGDYSVSP RRHA
Subjt:  EASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSHYGRSRSRSVSRSRSPRHPSGSRSRYRSRSYSPAPRWRGDYSVSPGRRHA

Query:  DYPESPRGAPRERDGERSRQVYSPGYDNAD--DHDRNGNGNGYHE
        DYP SPRGA RERDGERSRQVYSPGYDNAD  D D NGNGNGYH+
Subjt:  DYPESPRGAPRERDGERSRQVYSPGYDNAD--DHDRNGNGNGYHE

XP_008461655.1 PREDICTED: serine/arginine-rich SC35-like splicing factor SCL30 [Cucumis melo]6.4e-10385.6Show/hide
Query:  MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGGYGRRREQPHGSLLVRNIPMDC--------------------------SDPRGFAFVEFVDPY
        MRRYSPPYHSPPRRGYGGRGRSPPGRGY GGGGGGGGGYGRRREQPHGSLLVRNIPMDC                           +PRGFAFVEFVDPY
Subjt:  MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGGYGRRREQPHGSLLVRNIPMDC--------------------------SDPRGFAFVEFVDPY

Query:  EASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSHYGRSRSRSVSRSRSPRHPSGSRSRYRSRSYSPAPRWRGDYSVSPGRRHA
        EASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSHYGRSRSRSVSRSRSPRHPSGSRSRYRSRSYSPAPRWRGDYSVSPGRRHA
Subjt:  EASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSHYGRSRSRSVSRSRSPRHPSGSRSRYRSRSYSPAPRWRGDYSVSPGRRHA

Query:  DYPESPRGAPRERDGERSRQVYSPGYDNADDHDRNGNGNGYHE
        DYPESPRGAPRERD ERSRQVYSPGYDNAD+HD+  NGNGYH+
Subjt:  DYPESPRGAPRERDGERSRQVYSPGYDNADDHDRNGNGNGYHE

XP_022987464.1 serine/arginine-rich SC35-like splicing factor SCL30 [Cucurbita maxima]3.3e-9982.86Show/hide
Query:  MRRYSPPYHSPPRRGYGGRGRSPPGRGY--GGGGGGGGGGYGRRREQPHGSLLVRNIPMDC--------------------------SDPRGFAFVEFVD
        MRRYSPPYHSPPRRGYGGRGRSPPGRGY  GGGGGGGGGGYGRRREQPHGSLLVRNIPMDC                            PRGFAFVEFVD
Subjt:  MRRYSPPYHSPPRRGYGGRGRSPPGRGY--GGGGGGGGGGYGRRREQPHGSLLVRNIPMDC--------------------------SDPRGFAFVEFVD

Query:  PYEASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSHYGRSRSRSVSRSRSPRHPSGSRSRYRSRSYSPAPRWRGDYSVSPGRR
        PYEASEAQYHMNGKKFAGREI VVLAAESRKRPEQMRQRSRRGPS YGGRRS+YGRSRSRSVSRSRSPRHPSGSRSR+RSRSYSPAPRWRGDYSVSP RR
Subjt:  PYEASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSHYGRSRSRSVSRSRSPRHPSGSRSRYRSRSYSPAPRWRGDYSVSPGRR

Query:  HADYPESPRGAPRERDGERSRQVYSPGYDNADDHDRNGNGNGYHE
        HADYP SPRGA RERDGERSRQVYSPGYDNAD  D +GNGNGYH+
Subjt:  HADYPESPRGAPRERDGERSRQVYSPGYDNADDHDRNGNGNGYHE

XP_038892246.1 serine/arginine-rich SC35-like splicing factor SCL30 isoform X1 [Benincasa hispida]7.3e-9983.06Show/hide
Query:  MRRYSPPYHSPPRRGYGGRGRSPPGRGY--GGGGGGGGGGYGRRREQPHGSLLVRNIPMDC--------------------------SDPRGFAFVEFVD
        MRRYSPPYHSPPRRGYGGRGRSPPGRGY  GGGGGGGGGGYGRRREQPHGSLLVRNIPMDC                           +PRGFAFVEFVD
Subjt:  MRRYSPPYHSPPRRGYGGRGRSPPGRGY--GGGGGGGGGGYGRRREQPHGSLLVRNIPMDC--------------------------SDPRGFAFVEFVD

Query:  PYEASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSHY---GRSRSRSVSRSRSPRHPSGSRSRYRSRSYSPAPRWRGDYSVSP
        PYEASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSHY   GRSRSRS+SRSRSPRHPSGSRSRYRSRSYSPAPRWRGDYSVSP
Subjt:  PYEASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSHY---GRSRSRSVSRSRSPRHPSGSRSRYRSRSYSPAPRWRGDYSVSP

Query:  GRRHADYPESPRGAPRERDGERSRQVYSPGYDNADDHDRNGNGNGYHE
         RRHADYPESPRG PRERD ER+RQVYSPGYDNADDH  N NGNGYH+
Subjt:  GRRHADYPESPRGAPRERDGERSRQVYSPGYDNADDHDRNGNGNGYHE

XP_038892248.1 serine/arginine-rich SC35-like splicing factor SCL30 isoform X2 [Benincasa hispida]1.7e-10084.08Show/hide
Query:  MRRYSPPYHSPPRRGYGGRGRSPPGRGY--GGGGGGGGGGYGRRREQPHGSLLVRNIPMDC--------------------------SDPRGFAFVEFVD
        MRRYSPPYHSPPRRGYGGRGRSPPGRGY  GGGGGGGGGGYGRRREQPHGSLLVRNIPMDC                           +PRGFAFVEFVD
Subjt:  MRRYSPPYHSPPRRGYGGRGRSPPGRGY--GGGGGGGGGGYGRRREQPHGSLLVRNIPMDC--------------------------SDPRGFAFVEFVD

Query:  PYEASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSHYGRSRSRSVSRSRSPRHPSGSRSRYRSRSYSPAPRWRGDYSVSPGRR
        PYEASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSHYGRSRSRS+SRSRSPRHPSGSRSRYRSRSYSPAPRWRGDYSVSP RR
Subjt:  PYEASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSHYGRSRSRSVSRSRSPRHPSGSRSRYRSRSYSPAPRWRGDYSVSPGRR

Query:  HADYPESPRGAPRERDGERSRQVYSPGYDNADDHDRNGNGNGYHE
        HADYPESPRG PRERD ER+RQVYSPGYDNADDH  N NGNGYH+
Subjt:  HADYPESPRGAPRERDGERSRQVYSPGYDNADDHDRNGNGNGYHE

TrEMBL top hitse value%identityAlignment
A0A0A0KNV5 RRM domain-containing protein4.5e-10284.15Show/hide
Query:  MRRYSPPYHSPPRRGYGGRGRSPPGRGY---GGGGGGGGGGYGRRREQPHGSLLVRNIPMDC--------------------------SDPRGFAFVEFV
        MRRYSPPYHSPPRRGYGGRGRSPPGRGY   GGGGGGGGGGYGRRREQPHGSLLVRNIPMDC                           +PRGFAFVEFV
Subjt:  MRRYSPPYHSPPRRGYGGRGRSPPGRGY---GGGGGGGGGGYGRRREQPHGSLLVRNIPMDC--------------------------SDPRGFAFVEFV

Query:  DPYEASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSHYGRSRSRSVSRSRSPRHPSGSRSRYRSRSYSPAPRWRGDYSVSPGR
        DPYEASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSHYGRSRSRSVSRSRSPRHPSGSRSRYRSRSYSPAPRWRGDYSVSPGR
Subjt:  DPYEASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSHYGRSRSRSVSRSRSPRHPSGSRSRYRSRSYSPAPRWRGDYSVSPGR

Query:  RHADYPESPRGAPRERDGERSRQVYSPGYDNADDHDRNGNGNGYHE
        RH DYPESPRGAPRERD ERSRQVYSPGYDNAD+H +  NGNGYH+
Subjt:  RHADYPESPRGAPRERDGERSRQVYSPGYDNADDHDRNGNGNGYHE

A0A1S3CFP8 serine/arginine-rich SC35-like splicing factor SCL303.1e-10385.6Show/hide
Query:  MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGGYGRRREQPHGSLLVRNIPMDC--------------------------SDPRGFAFVEFVDPY
        MRRYSPPYHSPPRRGYGGRGRSPPGRGY GGGGGGGGGYGRRREQPHGSLLVRNIPMDC                           +PRGFAFVEFVDPY
Subjt:  MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGGYGRRREQPHGSLLVRNIPMDC--------------------------SDPRGFAFVEFVDPY

Query:  EASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSHYGRSRSRSVSRSRSPRHPSGSRSRYRSRSYSPAPRWRGDYSVSPGRRHA
        EASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSHYGRSRSRSVSRSRSPRHPSGSRSRYRSRSYSPAPRWRGDYSVSPGRRHA
Subjt:  EASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSHYGRSRSRSVSRSRSPRHPSGSRSRYRSRSYSPAPRWRGDYSVSPGRRHA

Query:  DYPESPRGAPRERDGERSRQVYSPGYDNADDHDRNGNGNGYHE
        DYPESPRGAPRERD ERSRQVYSPGYDNAD+HD+  NGNGYH+
Subjt:  DYPESPRGAPRERDGERSRQVYSPGYDNADDHDRNGNGNGYHE

A0A6J1CBL6 serine/arginine-rich SC35-like splicing factor SCL303.0e-9882.3Show/hide
Query:  MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGGYGRRREQPHGSLLVRNIPMDC--------------------------SDPRGFAFVEFVDPY
        MRRYSPPYHSPPRRGYGGRGRSPPGRGY GGGGGGGGGYGRRREQ HGSLLVRNIPMDC                           +PRGFAFVEFVDPY
Subjt:  MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGGYGRRREQPHGSLLVRNIPMDC--------------------------SDPRGFAFVEFVDPY

Query:  EASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSHYGRSRSRSVSRSRSPRHPSGSRSRYRSRSYSPAPRWRGDYSVSPGRRHA
        EASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSGYGGRRS+YGRSRSRSVSRSRSP HPSGSRSRYRSRSYSPAPRWRGDYSVSP RRHA
Subjt:  EASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSHYGRSRSRSVSRSRSPRHPSGSRSRYRSRSYSPAPRWRGDYSVSPGRRHA

Query:  DYPESPRGAPRERDGERSRQVYSPGYDNADDHDRNGNGNGYHE
        DYP SPRGAP ERDGERS+Q YSPGYDNAD HD   +GNGYH+
Subjt:  DYPESPRGAPRERDGERSRQVYSPGYDNADDHDRNGNGNGYHE

A0A6J1H0N2 serine/arginine-rich SC35-like splicing factor SCL306.7e-9881.89Show/hide
Query:  MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGGYGRRREQPHGSLLVRNIPMDC--------------------------SDPRGFAFVEFVDPY
        MRRYSPPYHSPPRRGYGGRGRSPPGRGY   GGGGGGGYGRRREQPHGSLLVRNIPMDC                            PRGFAFVEFVDPY
Subjt:  MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGGYGRRREQPHGSLLVRNIPMDC--------------------------SDPRGFAFVEFVDPY

Query:  EASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSHYGRSRSRSVSRSRSPRHPSGSRSRYRSRSYSPAPRWRGDYSVSPGRRHA
        EASEAQYHMNGKKFAGREI VVLAAESRKRPEQMRQRSRRGPS YGGRRS+YGRSRSRSVSRSRSPRHPSGSRSR+RSRSYSPAPRWRGDYSVSP RRHA
Subjt:  EASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSHYGRSRSRSVSRSRSPRHPSGSRSRYRSRSYSPAPRWRGDYSVSPGRRHA

Query:  DYPESPRGAPRERDGERSRQVYSPGYDNADDHDRNGNGNGYHE
        DYP SPRGA RERDGER+RQVYSPGYDNAD  D +GNGNGYH+
Subjt:  DYPESPRGAPRERDGERSRQVYSPGYDNADDHDRNGNGNGYHE

A0A6J1JIZ1 serine/arginine-rich SC35-like splicing factor SCL301.6e-9982.86Show/hide
Query:  MRRYSPPYHSPPRRGYGGRGRSPPGRGY--GGGGGGGGGGYGRRREQPHGSLLVRNIPMDC--------------------------SDPRGFAFVEFVD
        MRRYSPPYHSPPRRGYGGRGRSPPGRGY  GGGGGGGGGGYGRRREQPHGSLLVRNIPMDC                            PRGFAFVEFVD
Subjt:  MRRYSPPYHSPPRRGYGGRGRSPPGRGY--GGGGGGGGGGYGRRREQPHGSLLVRNIPMDC--------------------------SDPRGFAFVEFVD

Query:  PYEASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSHYGRSRSRSVSRSRSPRHPSGSRSRYRSRSYSPAPRWRGDYSVSPGRR
        PYEASEAQYHMNGKKFAGREI VVLAAESRKRPEQMRQRSRRGPS YGGRRS+YGRSRSRSVSRSRSPRHPSGSRSR+RSRSYSPAPRWRGDYSVSP RR
Subjt:  PYEASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSHYGRSRSRSVSRSRSPRHPSGSRSRYRSRSYSPAPRWRGDYSVSPGRR

Query:  HADYPESPRGAPRERDGERSRQVYSPGYDNADDHDRNGNGNGYHE
        HADYP SPRGA RERDGERSRQVYSPGYDNAD  D +GNGNGYH+
Subjt:  HADYPESPRGAPRERDGERSRQVYSPGYDNADDHDRNGNGNGYHE

SwissProt top hitse value%identityAlignment
Q1PDV2 Serine/arginine-rich SC35-like splicing factor SCL284.9e-0532.31Show/hide
Query:  RRYS--PPYHSPP--RRGYGGR--GRSPPGRGYGGGGGGGGGGYGRRREQPHGSLLVRNIPMDC--------------------------SDPRGFAFVE
        R YS  P   SPP  R+GY        P  R +   G  G              LL+RN+P+D                            +PRGF FV+
Subjt:  RRYS--PPYHSPP--RRGYGGR--GRSPPGRGYGGGGGGGGGGYGRRREQPHGSLLVRNIPMDC--------------------------SDPRGFAFVE

Query:  FVDPYEASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSHYGRSRSRSVSRSRSPRHPSGSRSRYRSRSYSPAPRWRGDYSVSP
        +    +A+EA   MN K   GREI +V A E+RK P++MR       +G  GR   Y R+  RS  R    R+ S SRSR   R  S   + R D   SP
Subjt:  FVDPYEASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSHYGRSRSRSVSRSRSPRHPSGSRSRYRSRSYSPAPRWRGDYSVSP

Query:  GRRHADYPESPRGAPRERDGERSRQVYSP
         RR      SP   PR     +SR   SP
Subjt:  GRRHADYPESPRGAPRERDGERSRQVYSP

Q8L3X8 Serine/arginine-rich SC35-like splicing factor SCL303.5e-5156.91Show/hide
Query:  MRRYSPPYHSPPRRGYGGRGRS----PPGRGYGGGGGGGGGGYGRRREQPHGSLLVRNIPMDC--------------------------SDPRGFAFVEF
        MRRYSPPY+SPPRRGYGGRGRS    PP RGYGGGGGGGG     RR   HGSLLVRNIP+DC                            PRGFAFVEF
Subjt:  MRRYSPPYHSPPRRGYGGRGRS----PPGRGYGGGGGGGGGGYGRRREQPHGSLLVRNIPMDC--------------------------SDPRGFAFVEF

Query:  VDPYEASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSR-RGPSGYGGRRSHYGRSRSRSVSRSRSPRHPSGSRSRYRSRSYSPAPRWRGDYSVSP
        VD Y+A EAQ  MN + FAGREITVV+A+ESRKRPE+MR ++R R     G R   +GRSRSRS+SRSRSPR PS SRSRYRSRSYSPAPR RG      
Subjt:  VDPYEASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSR-RGPSGYGGRRSHYGRSRSRSVSRSRSPRHPSGSRSRYRSRSYSPAPRWRGDYSVSP

Query:  GRRHADYPESPRGAPRERDGERSRQVYSPGYDN----ADDHDRNGN
                  PRG   E D   SR+ YSPGY+     A D DRNG+
Subjt:  GRRHADYPESPRGAPRERDGERSRQVYSPGYDN----ADDHDRNGN

Q9BRL6 Serine/arginine-rich splicing factor 87.3e-0940.4Show/hide
Query:  PRGFAFVEFVDPYEASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPS---GYGGRRSHYGR----SRSRSVSRSRSPR-HPSGSRSRYRSR
        PRGFAFV F D  +A +A+  M+G +  GRE+ V +A   R+   + RQ   RG S   GYG R   YGR     R R  SRSR P    S SRSRYR  
Subjt:  PRGFAFVEFVDPYEASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPS---GYGGRRSHYGR----SRSRSVSRSRSPR-HPSGSRSRYRSR

Query:  SYSPAPRWRGDYSVSPGRRHADYPESPRGAPRERDGERSRQVY-SPGYDNA
         YS +P  R  YS       + Y  SP    R R+       Y S GY N+
Subjt:  SYSPAPRWRGDYSVSPGRRHADYPESPRGAPRERDGERSRQVY-SPGYDNA

Q9LHP2 Serine/arginine-rich SC35-like splicing factor SCL30A8.1e-1638.39Show/hide
Query:  RRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGGYGRRREQPHGSLLVRNIPMDC--------------------------SDPRGFAFVEFVDPYE
        R Y+P   SPP RGYG RGRSP  RG  GG          R      SLLVRN+  DC                           DPRGF F++F+DP +
Subjt:  RRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGGYGRRREQPHGSLLVRNIPMDC--------------------------SDPRGFAFVEFVDPYE

Query:  ASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSHYGRSRSRSVSRSRSPRHPSGSRSRYRSRSY-SPAPRWRGDYSVSPGRRHA
        A+EA++ M+G    GRE+TVV A E+RK+P +MR R R      GGR + +   R      SRSP    G RSR RSR Y SP  +     SVSP  R  
Subjt:  ASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSHYGRSRSRSVSRSRSPRHPSGSRSRYRSRSY-SPAPRWRGDYSVSPGRRHA

Query:  DYPES-----PRGAPRERDGERSR
        +   S     P    R R G   R
Subjt:  DYPES-----PRGAPRERDGERSR

Q9SEU4 Serine/arginine-rich SC35-like splicing factor SCL331.3e-1841.63Show/hide
Query:  RRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGGYGRRREQPHGSLLVRNIPMDC--------------------------SDPRGFAFVEFVDPYE
        R Y+P   SPP RGYG RGRSP  RG  G         GR R+ P  SLLVRN+  DC                           DPRGF FV+F+DP +
Subjt:  RRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGGYGRRREQPHGSLLVRNIPMDC--------------------------SDPRGFAFVEFVDPYE

Query:  ASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSHYGRSRSRSVSRSRSPRHPSGSRSRYRSRS-YSPAPRWRGDYSVSPGRRHA
        A++A++HM+G    GRE+TVV A E+RK+P +MR R R      GGR     R+  R  SRSRSP  P   RSR RS   YSP PR     S+SP     
Subjt:  ASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSHYGRSRSRSVSRSRSPRHPSGSRSRYRSRS-YSPAPRWRGDYSVSPGRRHA

Query:  DYPESPRGAPRERDGERSRQV
        D   S   +P   DG R R +
Subjt:  DYPESPRGAPRERDGERSRQV

Arabidopsis top hitse value%identityAlignment
AT1G55310.1 SC35-like splicing factor 339.5e-2041.63Show/hide
Query:  RRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGGYGRRREQPHGSLLVRNIPMDC--------------------------SDPRGFAFVEFVDPYE
        R Y+P   SPP RGYG RGRSP  RG  G         GR R+ P  SLLVRN+  DC                           DPRGF FV+F+DP +
Subjt:  RRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGGYGRRREQPHGSLLVRNIPMDC--------------------------SDPRGFAFVEFVDPYE

Query:  ASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSHYGRSRSRSVSRSRSPRHPSGSRSRYRSRS-YSPAPRWRGDYSVSPGRRHA
        A++A++HM+G    GRE+TVV A E+RK+P +MR R R      GGR     R+  R  SRSRSP  P   RSR RS   YSP PR     S+SP     
Subjt:  ASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSHYGRSRSRSVSRSRSPRHPSGSRSRYRSRS-YSPAPRWRGDYSVSPGRRHA

Query:  DYPESPRGAPRERDGERSRQV
        D   S   +P   DG R R +
Subjt:  DYPESPRGAPRERDGERSRQV

AT1G55310.2 SC35-like splicing factor 339.5e-2041.63Show/hide
Query:  RRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGGYGRRREQPHGSLLVRNIPMDC--------------------------SDPRGFAFVEFVDPYE
        R Y+P   SPP RGYG RGRSP  RG  G         GR R+ P  SLLVRN+  DC                           DPRGF FV+F+DP +
Subjt:  RRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGGYGRRREQPHGSLLVRNIPMDC--------------------------SDPRGFAFVEFVDPYE

Query:  ASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSHYGRSRSRSVSRSRSPRHPSGSRSRYRSRS-YSPAPRWRGDYSVSPGRRHA
        A++A++HM+G    GRE+TVV A E+RK+P +MR R R      GGR     R+  R  SRSRSP  P   RSR RS   YSP PR     S+SP     
Subjt:  ASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSHYGRSRSRSVSRSRSPRHPSGSRSRYRSRS-YSPAPRWRGDYSVSPGRRHA

Query:  DYPESPRGAPRERDGERSRQV
        D   S   +P   DG R R +
Subjt:  DYPESPRGAPRERDGERSRQV

AT1G55310.3 SC35-like splicing factor 332.1e-1939.91Show/hide
Query:  RRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGGYGRRREQPHGSLLVRNIPMDC--------------------------------------SDPR
        R Y+P   SPP RGYG RGRSP  RG  G         GR R+ P  SLLVRN+  DC                                       DPR
Subjt:  RRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGGYGRRREQPHGSLLVRNIPMDC--------------------------------------SDPR

Query:  GFAFVEFVDPYEASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSHYGRSRSRSVSRSRSPRHPSGSRSRYRSRS-YSPAPRWR
        GF FV+F+DP +A++A++HM+G    GRE+TVV A E+RK+P +MR R R G S +  RR    R+  R  SRSRSP  P   RSR RS   YSP PR  
Subjt:  GFAFVEFVDPYEASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSHYGRSRSRSVSRSRSPRHPSGSRSRYRSRS-YSPAPRWR

Query:  GDYSVSPGRRHADYPESPRGAPRERDGERSRQV
           S+SP     D   S   +P   DG R R +
Subjt:  GDYSVSPGRRHADYPESPRGAPRERDGERSRQV

AT3G13570.1 SC35-like splicing factor 30A5.7e-1738.39Show/hide
Query:  RRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGGYGRRREQPHGSLLVRNIPMDC--------------------------SDPRGFAFVEFVDPYE
        R Y+P   SPP RGYG RGRSP  RG  GG          R      SLLVRN+  DC                           DPRGF F++F+DP +
Subjt:  RRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGGYGRRREQPHGSLLVRNIPMDC--------------------------SDPRGFAFVEFVDPYE

Query:  ASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSHYGRSRSRSVSRSRSPRHPSGSRSRYRSRSY-SPAPRWRGDYSVSPGRRHA
        A+EA++ M+G    GRE+TVV A E+RK+P +MR R R      GGR + +   R      SRSP    G RSR RSR Y SP  +     SVSP  R  
Subjt:  ASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSHYGRSRSRSVSRSRSPRHPSGSRSRYRSRSY-SPAPRWRGDYSVSPGRRHA

Query:  DYPES-----PRGAPRERDGERSR
        +   S     P    R R G   R
Subjt:  DYPES-----PRGAPRERDGERSR

AT3G55460.1 SC35-like splicing factor 302.5e-5256.91Show/hide
Query:  MRRYSPPYHSPPRRGYGGRGRS----PPGRGYGGGGGGGGGGYGRRREQPHGSLLVRNIPMDC--------------------------SDPRGFAFVEF
        MRRYSPPY+SPPRRGYGGRGRS    PP RGYGGGGGGGG     RR   HGSLLVRNIP+DC                            PRGFAFVEF
Subjt:  MRRYSPPYHSPPRRGYGGRGRS----PPGRGYGGGGGGGGGGYGRRREQPHGSLLVRNIPMDC--------------------------SDPRGFAFVEF

Query:  VDPYEASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSR-RGPSGYGGRRSHYGRSRSRSVSRSRSPRHPSGSRSRYRSRSYSPAPRWRGDYSVSP
        VD Y+A EAQ  MN + FAGREITVV+A+ESRKRPE+MR ++R R     G R   +GRSRSRS+SRSRSPR PS SRSRYRSRSYSPAPR RG      
Subjt:  VDPYEASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSR-RGPSGYGGRRSHYGRSRSRSVSRSRSPRHPSGSRSRYRSRSYSPAPRWRGDYSVSP

Query:  GRRHADYPESPRGAPRERDGERSRQVYSPGYDN----ADDHDRNGN
                  PRG   E D   SR+ YSPGY+     A D DRNG+
Subjt:  GRRHADYPESPRGAPRERDGERSRQVYSPGYDN----ADDHDRNGN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAAGATACAGTCCACCATACCATAGTCCTCCAAGAAGAGGATACGGTGGTCGTGGAAGAAGCCCCCCGGGTAGGGGTTATGGTGGTGGTGGAGGTGGAGGTGGCGG
CGGGTATGGAAGACGAAGGGAACAACCTCATGGTAGCCTTCTGGTTAGAAATATTCCTATGGATTGCAGTGATCCTCGAGGATTTGCGTTTGTGGAGTTTGTTGATCCTT
ATGAGGCTTCTGAAGCTCAGTACCATATGAATGGGAAAAAATTTGCTGGTAGGGAGATTACTGTGGTCCTTGCTGCAGAGTCGAGGAAGAGGCCAGAACAGATGCGGCAA
AGGAGTAGAAGGGGACCATCTGGCTATGGTGGACGCCGTTCTCATTATGGGCGTTCTAGATCTCGTTCAGTATCCAGATCACGCTCCCCTCGCCATCCGTCGGGTTCAAG
AAGTAGATATCGATCAAGGTCCTACTCTCCTGCTCCGAGATGGCGAGGTGACTATTCTGTTTCCCCTGGTAGAAGGCATGCAGATTACCCAGAATCACCCAGAGGTGCTC
CTCGTGAGCGAGACGGTGAGAGGAGTCGACAAGTATATTCTCCTGGTTATGATAATGCTGATGACCACGATCGCAATGGAAATGGAAATGGATATCATGAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGAAGATACAGTCCACCATACCATAGTCCTCCAAGAAGAGGATACGGTGGTCGTGGAAGAAGCCCCCCGGGTAGGGGTTATGGTGGTGGTGGAGGTGGAGGTGGCGG
CGGGTATGGAAGACGAAGGGAACAACCTCATGGTAGCCTTCTGGTTAGAAATATTCCTATGGATTGCAGTGATCCTCGAGGATTTGCGTTTGTGGAGTTTGTTGATCCTT
ATGAGGCTTCTGAAGCTCAGTACCATATGAATGGGAAAAAATTTGCTGGTAGGGAGATTACTGTGGTCCTTGCTGCAGAGTCGAGGAAGAGGCCAGAACAGATGCGGCAA
AGGAGTAGAAGGGGACCATCTGGCTATGGTGGACGCCGTTCTCATTATGGGCGTTCTAGATCTCGTTCAGTATCCAGATCACGCTCCCCTCGCCATCCGTCGGGTTCAAG
AAGTAGATATCGATCAAGGTCCTACTCTCCTGCTCCGAGATGGCGAGGTGACTATTCTGTTTCCCCTGGTAGAAGGCATGCAGATTACCCAGAATCACCCAGAGGTGCTC
CTCGTGAGCGAGACGGTGAGAGGAGTCGACAAGTATATTCTCCTGGTTATGATAATGCTGATGACCACGATCGCAATGGAAATGGAAATGGATATCATGAGTAA
Protein sequenceShow/hide protein sequence
MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGGYGRRREQPHGSLLVRNIPMDCSDPRGFAFVEFVDPYEASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQ
RSRRGPSGYGGRRSHYGRSRSRSVSRSRSPRHPSGSRSRYRSRSYSPAPRWRGDYSVSPGRRHADYPESPRGAPRERDGERSRQVYSPGYDNADDHDRNGNGNGYHE