; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10014939 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10014939
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description60S ribosomal protein L35-like
Genome locationChr02:22030984..22034033
RNA-Seq ExpressionHG10014939
SyntenyHG10014939
Gene Ontology termsGO:0000463 - maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (biological process)
GO:0006412 - translation (biological process)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003729 - mRNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR001854 - Ribosomal protein L29/L35
IPR036049 - Ribosomal protein L29/L35 superfamily
IPR045059 - 60S ribosomal protein L35


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6601021.1 Spliceosome-associated protein 130 B, partial [Cucurbita argyrosperma subsp. sororia]5.9e-6093.62Show/hide
Query:  RPPPNPKTQQPVSASQILMARIKVHELRQKSKGDLLTQLKDLKAELALLRVSKVTGGTPNKLSKIKVVRLSIAQVLTVISQKQKSALREAYKKKKLLPLD
        +PPPNPKT QPVSA QILMARIKVHELRQKSK DLLTQLKDLKAEL+LLRV+KVTGG PNKLSKIKVVRLSIAQVLTVISQKQK+ALREAYKKKKLLPLD
Subjt:  RPPPNPKTQQPVSASQILMARIKVHELRQKSKGDLLTQLKDLKAELALLRVSKVTGGTPNKLSKIKVVRLSIAQVLTVISQKQKSALREAYKKKKLLPLD

Query:  LRPKKTRAIRRRLTKHQASLKTERQKKKEMYYPLRKYAIKV
        LRPKKTRAIRRRLTKHQASLKTER+KKKEMYYPLRKYAIKV
Subjt:  LRPKKTRAIRRRLTKHQASLKTERQKKKEMYYPLRKYAIKV

KAG7031634.1 60S ribosomal protein L35, partial [Cucurbita argyrosperma subsp. argyrosperma]7.5e-6393.84Show/hide
Query:  GFASCRPPPNPKTQQPVSASQILMARIKVHELRQKSKGDLLTQLKDLKAELALLRVSKVTGGTPNKLSKIKVVRLSIAQVLTVISQKQKSALREAYKKKK
        G ASCRPPPNPKT QPVSA QILMARIKVHELRQKSK DLLTQLKDLKAEL+LLRV+KVTGG PNKLSKIKVVRLSIAQVLTVISQKQK+ALREAYKKKK
Subjt:  GFASCRPPPNPKTQQPVSASQILMARIKVHELRQKSKGDLLTQLKDLKAELALLRVSKVTGGTPNKLSKIKVVRLSIAQVLTVISQKQKSALREAYKKKK

Query:  LLPLDLRPKKTRAIRRRLTKHQASLKTERQKKKEMYYPLRKYAIKV
        LLPLDLRPKKTRAIRRRLTKHQASLKTER+KKKEMYYPLRKYAIKV
Subjt:  LLPLDLRPKKTRAIRRRLTKHQASLKTERQKKKEMYYPLRKYAIKV

XP_004150961.1 60S ribosomal protein L35 [Cucumis sativus]7.8e-5296.75Show/hide
Query:  MARIKVHELRQKSKGDLLTQLKDLKAELALLRVSKVTGGTPNKLSKIKVVRLSIAQVLTVISQKQKSALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
        MARIKVHELRQKSKGDLL QLKDLKAELALLRV+KVTGG PNKLSKIKVVRLSIAQVLTVISQKQK+ALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
Subjt:  MARIKVHELRQKSKGDLLTQLKDLKAELALLRVSKVTGGTPNKLSKIKVVRLSIAQVLTVISQKQKSALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA

Query:  SLKTERQKKKEMYYPLRKYAIKV
        SLKTERQKKKEMYYPLRKYAIKV
Subjt:  SLKTERQKKKEMYYPLRKYAIKV

XP_022134532.1 60S ribosomal protein L35 [Momordica charantia]3.0e-5195.93Show/hide
Query:  MARIKVHELRQKSKGDLLTQLKDLKAELALLRVSKVTGGTPNKLSKIKVVRLSIAQVLTVISQKQKSALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
        MARIKVHELRQKSK DLLTQLKDLKAELALLRV+KVTGG PNKLSKIKVVRLSIAQVLTVISQKQK+ALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
Subjt:  MARIKVHELRQKSKGDLLTQLKDLKAELALLRVSKVTGGTPNKLSKIKVVRLSIAQVLTVISQKQKSALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA

Query:  SLKTERQKKKEMYYPLRKYAIKV
        SLKTERQKKKEMY+PLRKYAIKV
Subjt:  SLKTERQKKKEMYYPLRKYAIKV

XP_038891782.1 60S ribosomal protein L35-like [Benincasa hispida]9.2e-5398.37Show/hide
Query:  MARIKVHELRQKSKGDLLTQLKDLKAELALLRVSKVTGGTPNKLSKIKVVRLSIAQVLTVISQKQKSALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
        MARIKVHELRQKSKGDLLTQLKDLKAELALLRV+KVTGG PNKLSKIKVVRLSIAQVLTVISQKQKSALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
Subjt:  MARIKVHELRQKSKGDLLTQLKDLKAELALLRVSKVTGGTPNKLSKIKVVRLSIAQVLTVISQKQKSALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA

Query:  SLKTERQKKKEMYYPLRKYAIKV
        SLKTERQKKKEMYYPLRKYAIKV
Subjt:  SLKTERQKKKEMYYPLRKYAIKV

TrEMBL top hitse value%identityAlignment
A0A0A0KLK6 Uncharacterized protein3.8e-5296.75Show/hide
Query:  MARIKVHELRQKSKGDLLTQLKDLKAELALLRVSKVTGGTPNKLSKIKVVRLSIAQVLTVISQKQKSALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
        MARIKVHELRQKSKGDLL QLKDLKAELALLRV+KVTGG PNKLSKIKVVRLSIAQVLTVISQKQK+ALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
Subjt:  MARIKVHELRQKSKGDLLTQLKDLKAELALLRVSKVTGGTPNKLSKIKVVRLSIAQVLTVISQKQKSALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA

Query:  SLKTERQKKKEMYYPLRKYAIKV
        SLKTERQKKKEMYYPLRKYAIKV
Subjt:  SLKTERQKKKEMYYPLRKYAIKV

A0A1S3CF13 60S ribosomal protein L35-like1.4e-5195.93Show/hide
Query:  MARIKVHELRQKSKGDLLTQLKDLKAELALLRVSKVTGGTPNKLSKIKVVRLSIAQVLTVISQKQKSALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
        MARIKVHELRQKSKGDLL QLKDLKAELALLRV+KVTGG PNKLSKIKVVRLSIAQVLTVISQKQK+ALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQ 
Subjt:  MARIKVHELRQKSKGDLLTQLKDLKAELALLRVSKVTGGTPNKLSKIKVVRLSIAQVLTVISQKQKSALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA

Query:  SLKTERQKKKEMYYPLRKYAIKV
        SLKTERQKKKEMYYPLRKYAIKV
Subjt:  SLKTERQKKKEMYYPLRKYAIKV

A0A6J1BZV3 60S ribosomal protein L351.4e-5195.93Show/hide
Query:  MARIKVHELRQKSKGDLLTQLKDLKAELALLRVSKVTGGTPNKLSKIKVVRLSIAQVLTVISQKQKSALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
        MARIKVHELRQKSK DLLTQLKDLKAELALLRV+KVTGG PNKLSKIKVVRLSIAQVLTVISQKQK+ALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
Subjt:  MARIKVHELRQKSKGDLLTQLKDLKAELALLRVSKVTGGTPNKLSKIKVVRLSIAQVLTVISQKQKSALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA

Query:  SLKTERQKKKEMYYPLRKYAIKV
        SLKTERQKKKEMY+PLRKYAIKV
Subjt:  SLKTERQKKKEMYYPLRKYAIKV

A0A6J1FH81 60S ribosomal protein L352.4e-5195.12Show/hide
Query:  MARIKVHELRQKSKGDLLTQLKDLKAELALLRVSKVTGGTPNKLSKIKVVRLSIAQVLTVISQKQKSALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
        MARIKVHELRQKSK DLLTQLKDLKAEL+LLRV+KVTGG PNKLSKIKVVRLSIAQVLTVISQKQK+ALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
Subjt:  MARIKVHELRQKSKGDLLTQLKDLKAELALLRVSKVTGGTPNKLSKIKVVRLSIAQVLTVISQKQKSALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA

Query:  SLKTERQKKKEMYYPLRKYAIKV
        SLKTER+KKKEMYYPLRKYAIKV
Subjt:  SLKTERQKKKEMYYPLRKYAIKV

A0A6J1JVN4 60S ribosomal protein L352.4e-5195.12Show/hide
Query:  MARIKVHELRQKSKGDLLTQLKDLKAELALLRVSKVTGGTPNKLSKIKVVRLSIAQVLTVISQKQKSALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
        MARIKVHELRQKSK DLLTQLKDLKAEL+LLRV+KVTGG PNKLSKIKVVRLSIAQVLTVISQKQK+ALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
Subjt:  MARIKVHELRQKSKGDLLTQLKDLKAELALLRVSKVTGGTPNKLSKIKVVRLSIAQVLTVISQKQKSALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA

Query:  SLKTERQKKKEMYYPLRKYAIKV
        SLKTER+KKKEMYYPLRKYAIKV
Subjt:  SLKTERQKKKEMYYPLRKYAIKV

SwissProt top hitse value%identityAlignment
O80626 60S ribosomal protein L35-27.6e-5089.43Show/hide
Query:  MARIKVHELRQKSKGDLLTQLKDLKAELALLRVSKVTGGTPNKLSKIKVVRLSIAQVLTVISQKQKSALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
        MARIKVHELR+KSK DL  QLK+ KAELALLRV+KVTGG PNKLSKIKVVR SIAQVLTVISQKQKSALREAYK KKLLPLDLRPKKTRAIRRRLTKHQA
Subjt:  MARIKVHELRQKSKGDLLTQLKDLKAELALLRVSKVTGGTPNKLSKIKVVRLSIAQVLTVISQKQKSALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA

Query:  SLKTERQKKKEMYYPLRKYAIKV
        SLKTER+KKKEMY+P+RKYAIKV
Subjt:  SLKTERQKKKEMYYPLRKYAIKV

Q9LZ41 60S ribosomal protein L35-41.7e-4989.43Show/hide
Query:  MARIKVHELRQKSKGDLLTQLKDLKAELALLRVSKVTGGTPNKLSKIKVVRLSIAQVLTVISQKQKSALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
        MARIKVHELR KSK DL  QLK+ KAELALLRV+KVTGG PNKLSKIKVVR SIAQVLTVISQKQKSALREAYK KKLLPLDLRPKKTRAIRRRLTKHQA
Subjt:  MARIKVHELRQKSKGDLLTQLKDLKAELALLRVSKVTGGTPNKLSKIKVVRLSIAQVLTVISQKQKSALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA

Query:  SLKTERQKKKEMYYPLRKYAIKV
        SLKTER+KKKEMY+P+RKYAIKV
Subjt:  SLKTERQKKKEMYYPLRKYAIKV

Q9M3D2 60S ribosomal protein L35-33.8e-4988.62Show/hide
Query:  MARIKVHELRQKSKGDLLTQLKDLKAELALLRVSKVTGGTPNKLSKIKVVRLSIAQVLTVISQKQKSALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
        MARIKVHELR KSK DL TQLK+LKAELA LRV+KVTGG PNKLSKIKVVR SIAQVLTV SQKQKSALREAYK KKLLPLDLRPKKTRAIRRRLTKHQA
Subjt:  MARIKVHELRQKSKGDLLTQLKDLKAELALLRVSKVTGGTPNKLSKIKVVRLSIAQVLTVISQKQKSALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA

Query:  SLKTERQKKKEMYYPLRKYAIKV
        SLKTER+KKK+MY+P+RKYAIKV
Subjt:  SLKTERQKKKEMYYPLRKYAIKV

Q9M5L0 60S ribosomal protein L353.4e-5089.43Show/hide
Query:  MARIKVHELRQKSKGDLLTQLKDLKAELALLRVSKVTGGTPNKLSKIKVVRLSIAQVLTVISQKQKSALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
        MARIKVHELRQK+K +LL QLKDLKAELALLRV+KVTGG PNKLSKIKVVRLSIAQVLTVISQKQK ALREAYK KK LPLDLRPKKTRAIRRRLTKHQ 
Subjt:  MARIKVHELRQKSKGDLLTQLKDLKAELALLRVSKVTGGTPNKLSKIKVVRLSIAQVLTVISQKQKSALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA

Query:  SLKTERQKKKEMYYPLRKYAIKV
        SLKTER+KKKEMY+P+RKYAIKV
Subjt:  SLKTERQKKKEMYYPLRKYAIKV

Q9SF53 60S ribosomal protein L35-17.6e-5089.43Show/hide
Query:  MARIKVHELRQKSKGDLLTQLKDLKAELALLRVSKVTGGTPNKLSKIKVVRLSIAQVLTVISQKQKSALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
        MARIKVHELR+KSK DL  QLK+LKAELALLRV+KVTGG PNKLSKIKVVR SIAQVLTV SQKQKSALREAYK KKLLPLDLRPKKTRAIRRRLTKHQA
Subjt:  MARIKVHELRQKSKGDLLTQLKDLKAELALLRVSKVTGGTPNKLSKIKVVRLSIAQVLTVISQKQKSALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA

Query:  SLKTERQKKKEMYYPLRKYAIKV
        SLKTER+KKKEMY+P+RKYAIKV
Subjt:  SLKTERQKKKEMYYPLRKYAIKV

Arabidopsis top hitse value%identityAlignment
AT2G39390.1 Ribosomal L29 family protein5.4e-5189.43Show/hide
Query:  MARIKVHELRQKSKGDLLTQLKDLKAELALLRVSKVTGGTPNKLSKIKVVRLSIAQVLTVISQKQKSALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
        MARIKVHELR+KSK DL  QLK+ KAELALLRV+KVTGG PNKLSKIKVVR SIAQVLTVISQKQKSALREAYK KKLLPLDLRPKKTRAIRRRLTKHQA
Subjt:  MARIKVHELRQKSKGDLLTQLKDLKAELALLRVSKVTGGTPNKLSKIKVVRLSIAQVLTVISQKQKSALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA

Query:  SLKTERQKKKEMYYPLRKYAIKV
        SLKTER+KKKEMY+P+RKYAIKV
Subjt:  SLKTERQKKKEMYYPLRKYAIKV

AT3G09500.1 Ribosomal L29 family protein5.4e-5189.43Show/hide
Query:  MARIKVHELRQKSKGDLLTQLKDLKAELALLRVSKVTGGTPNKLSKIKVVRLSIAQVLTVISQKQKSALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
        MARIKVHELR+KSK DL  QLK+LKAELALLRV+KVTGG PNKLSKIKVVR SIAQVLTV SQKQKSALREAYK KKLLPLDLRPKKTRAIRRRLTKHQA
Subjt:  MARIKVHELRQKSKGDLLTQLKDLKAELALLRVSKVTGGTPNKLSKIKVVRLSIAQVLTVISQKQKSALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA

Query:  SLKTERQKKKEMYYPLRKYAIKV
        SLKTER+KKKEMY+P+RKYAIKV
Subjt:  SLKTERQKKKEMYYPLRKYAIKV

AT3G55170.1 Ribosomal L29 family protein2.7e-5088.62Show/hide
Query:  MARIKVHELRQKSKGDLLTQLKDLKAELALLRVSKVTGGTPNKLSKIKVVRLSIAQVLTVISQKQKSALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
        MARIKVHELR KSK DL TQLK+LKAELA LRV+KVTGG PNKLSKIKVVR SIAQVLTV SQKQKSALREAYK KKLLPLDLRPKKTRAIRRRLTKHQA
Subjt:  MARIKVHELRQKSKGDLLTQLKDLKAELALLRVSKVTGGTPNKLSKIKVVRLSIAQVLTVISQKQKSALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA

Query:  SLKTERQKKKEMYYPLRKYAIKV
        SLKTER+KKK+MY+P+RKYAIKV
Subjt:  SLKTERQKKKEMYYPLRKYAIKV

AT3G55170.2 Ribosomal L29 family protein2.7e-5088.62Show/hide
Query:  MARIKVHELRQKSKGDLLTQLKDLKAELALLRVSKVTGGTPNKLSKIKVVRLSIAQVLTVISQKQKSALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
        MARIKVHELR KSK DL TQLK+LKAELA LRV+KVTGG PNKLSKIKVVR SIAQVLTV SQKQKSALREAYK KKLLPLDLRPKKTRAIRRRLTKHQA
Subjt:  MARIKVHELRQKSKGDLLTQLKDLKAELALLRVSKVTGGTPNKLSKIKVVRLSIAQVLTVISQKQKSALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA

Query:  SLKTERQKKKEMYYPLRKYAIKV
        SLKTER+KKK+MY+P+RKYAIKV
Subjt:  SLKTERQKKKEMYYPLRKYAIKV

AT5G02610.1 Ribosomal L29 family protein1.2e-5089.43Show/hide
Query:  MARIKVHELRQKSKGDLLTQLKDLKAELALLRVSKVTGGTPNKLSKIKVVRLSIAQVLTVISQKQKSALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
        MARIKVHELR KSK DL  QLK+ KAELALLRV+KVTGG PNKLSKIKVVR SIAQVLTVISQKQKSALREAYK KKLLPLDLRPKKTRAIRRRLTKHQA
Subjt:  MARIKVHELRQKSKGDLLTQLKDLKAELALLRVSKVTGGTPNKLSKIKVVRLSIAQVLTVISQKQKSALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA

Query:  SLKTERQKKKEMYYPLRKYAIKV
        SLKTER+KKKEMY+P+RKYAIKV
Subjt:  SLKTERQKKKEMYYPLRKYAIKV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTTTTGCTAGTTGCAGACCTCCGCCGAATCCCAAAACCCAACAGCCGGTCTCTGCTTCTCAGATTCTAATGGCGAGAATTAAGGTTCATGAGCTTAGACAGAAGTC
GAAGGGGGATCTTTTGACCCAGCTTAAGGACCTTAAGGCGGAGCTTGCTCTTCTCCGTGTCTCTAAGGTCACTGGTGGTACTCCTAACAAGCTCTCCAAAATTAAGGTAG
TGAGGTTGTCAATCGCTCAGGTGTTGACAGTGATTTCTCAGAAACAGAAGTCTGCTCTTAGGGAAGCTTACAAGAAGAAGAAGCTTTTGCCTCTTGATTTGCGCCCCAAG
AAGACCAGGGCCATTCGTAGAAGGCTCACCAAACACCAAGCATCTCTAAAGACAGAGCGACAGAAGAAGAAAGAGATGTACTACCCATTGAGGAAGTACGCCATCAAGGT
GTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGTTTTGCTAGTTGCAGACCTCCGCCGAATCCCAAAACCCAACAGCCGGTCTCTGCTTCTCAGATTCTAATGGCGAGAATTAAGGTTCATGAGCTTAGACAGAAGTC
GAAGGGGGATCTTTTGACCCAGCTTAAGGACCTTAAGGCGGAGCTTGCTCTTCTCCGTGTCTCTAAGGTCACTGGTGGTACTCCTAACAAGCTCTCCAAAATTAAGGTAG
TGAGGTTGTCAATCGCTCAGGTGTTGACAGTGATTTCTCAGAAACAGAAGTCTGCTCTTAGGGAAGCTTACAAGAAGAAGAAGCTTTTGCCTCTTGATTTGCGCCCCAAG
AAGACCAGGGCCATTCGTAGAAGGCTCACCAAACACCAAGCATCTCTAAAGACAGAGCGACAGAAGAAGAAAGAGATGTACTACCCATTGAGGAAGTACGCCATCAAGGT
GTAA
Protein sequenceShow/hide protein sequence
MGFASCRPPPNPKTQQPVSASQILMARIKVHELRQKSKGDLLTQLKDLKAELALLRVSKVTGGTPNKLSKIKVVRLSIAQVLTVISQKQKSALREAYKKKKLLPLDLRPK
KTRAIRRRLTKHQASLKTERQKKKEMYYPLRKYAIKV