; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10014973 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10014973
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionRNA-binding (RRM/RBD/RNP motifs) family protein
Genome locationChr02:22505694..22507243
RNA-Seq ExpressionHG10014973
SyntenyHG10014973
Gene Ontology termsGO:0005634 - nucleus (cellular component)
GO:0003723 - RNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0034049.1 putative RNA-binding protein ARP1 isoform X1 [Cucumis melo var. makuwa]1.6e-13291.95Show/hide
Query:  MTMI--TSNNTNNAGLFGDTTLTKVFVGGLAWETPKEAMRYHFEKFGDILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASL
        MTM+  T+N+  NAGLFGDTTLTKVFVGGLAWETPKEAMR HF+KFG+ILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASL
Subjt:  MTMI--TSNNTNNAGLFGDTTLTKVFVGGLAWETPKEAMRYHFEKFGDILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASL

Query:  GARRGGSRSASATPPQGPQPGSNGGGPRTTSPA-APGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLGYMNGHYTQMYPGQ-AM
        GARRGGSRSASATPPQ PQPGSNGGGPRTT+ A APGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLGY+NGHYTQMYPGQ AM
Subjt:  GARRGGSRSASATPPQGPQPGSNGGGPRTTSPA-APGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLGYMNGHYTQMYPGQ-AM

Query:  VGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTSAGPFAAVPPTSIMSKPASVGPNPGPFY
        VG NTLMPMYPLYHYHQSHAMGMPAHIFPPSPT+AGPFAAVPPTSIMSKP +VGPNPGPF+
Subjt:  VGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTSAGPFAAVPPTSIMSKPASVGPNPGPFY

XP_004143608.1 probable RNA-binding protein ARP1 isoform X1 [Cucumis sativus]3.6e-13292.31Show/hide
Query:  MTMIT-----SNNTNNAGLFGDTTLTKVFVGGLAWETPKEAMRYHFEKFGDILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNL
        MTM+T     +N++ NAGLFGDTTLTKVFVGGLAWETPKEAMR HF KFG+ILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNL
Subjt:  MTMIT-----SNNTNNAGLFGDTTLTKVFVGGLAWETPKEAMRYHFEKFGDILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNL

Query:  ASLGARRGGSRSASATPPQGPQPGSNGGGPRTTSPA-APGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLGYMNGHYTQMYPGQ
        ASLGARRGGSRSASATPPQ PQPGSN GGPRTTS A APGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLGYMNGHYTQMYPGQ
Subjt:  ASLGARRGGSRSASATPPQGPQPGSNGGGPRTTSPA-APGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLGYMNGHYTQMYPGQ

Query:  AMVGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTSAGPFAAVPPTSIMSKPASVGPNPG
        AMVGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPT+AGPFAAVPPTSIMSKP +VGPNPG
Subjt:  AMVGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTSAGPFAAVPPTSIMSKPASVGPNPG

XP_011654915.1 probable RNA-binding protein ARP1 isoform X2 [Cucumis sativus]1.4e-13192.28Show/hide
Query:  MTMIT-----SNNTNNAGLFGDTTLTKVFVGGLAWETPKEAMRYHFEKFGDILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNL
        MTM+T     +N++ NAGLFGDTTLTKVFVGGLAWETPKEAMR HF KFG+ILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNL
Subjt:  MTMIT-----SNNTNNAGLFGDTTLTKVFVGGLAWETPKEAMRYHFEKFGDILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNL

Query:  ASLGARRGGSRSASATPPQGPQPGSNGGGPRTTSPA-APGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLGYMNGHYTQMYPGQ
        ASLGARRGGSRSASATPPQ PQPGSN GGPRTTS A APGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLGYMNGHYTQMYPGQ
Subjt:  ASLGARRGGSRSASATPPQGPQPGSNGGGPRTTSPA-APGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLGYMNGHYTQMYPGQ

Query:  AMVGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTSAGPFAAVPPTSIMSKPASVGPNP
        AMVGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPT+AGPFAAVPPTSIMSKP +VGPNP
Subjt:  AMVGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTSAGPFAAVPPTSIMSKPASVGPNP

XP_038891949.1 probable RNA-binding protein ARP1 isoform X1 [Benincasa hispida]2.2e-13494.51Show/hide
Query:  MTMITSNNTNNAGLFGDTTLTKVFVGGLAWETPKEAMRYHFEKFGDILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGA
        M+  T++N NNAGLFGDTTLTKVFVGGLAWETPKEAMR HFEKFG+ILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGA
Subjt:  MTMITSNNTNNAGLFGDTTLTKVFVGGLAWETPKEAMRYHFEKFGDILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGA

Query:  RRGGSRSASATPPQGPQPGSNGGGPRTTS-PAAPGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLGYMNGHYTQMYPGQAMVGA
        RRGGSRSASATPPQ PQPGSNGGGPRTTS  A PGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLGYMNGHYTQMYPGQAMVGA
Subjt:  RRGGSRSASATPPQGPQPGSNGGGPRTTS-PAAPGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLGYMNGHYTQMYPGQAMVGA

Query:  NTLMPMYPLYHYHQSHAMGMPAHIFPPSPTSAGPFAAVPPTSIMSKPASVGPNPG
        NTLMPMYPLYHYHQSHAMGMPAHIFPPSPT+AGPFAAVPP+SIMSKPASVGPNPG
Subjt:  NTLMPMYPLYHYHQSHAMGMPAHIFPPSPTSAGPFAAVPPTSIMSKPASVGPNPG

XP_038891950.1 probable RNA-binding protein ARP1 isoform X2 [Benincasa hispida]8.5e-13494.49Show/hide
Query:  MTMITSNNTNNAGLFGDTTLTKVFVGGLAWETPKEAMRYHFEKFGDILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGA
        M+  T++N NNAGLFGDTTLTKVFVGGLAWETPKEAMR HFEKFG+ILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGA
Subjt:  MTMITSNNTNNAGLFGDTTLTKVFVGGLAWETPKEAMRYHFEKFGDILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGA

Query:  RRGGSRSASATPPQGPQPGSNGGGPRTTS-PAAPGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLGYMNGHYTQMYPGQAMVGA
        RRGGSRSASATPPQ PQPGSNGGGPRTTS  A PGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLGYMNGHYTQMYPGQAMVGA
Subjt:  RRGGSRSASATPPQGPQPGSNGGGPRTTS-PAAPGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLGYMNGHYTQMYPGQAMVGA

Query:  NTLMPMYPLYHYHQSHAMGMPAHIFPPSPTSAGPFAAVPPTSIMSKPASVGPNP
        NTLMPMYPLYHYHQSHAMGMPAHIFPPSPT+AGPFAAVPP+SIMSKPASVGPNP
Subjt:  NTLMPMYPLYHYHQSHAMGMPAHIFPPSPTSAGPFAAVPPTSIMSKPASVGPNP

TrEMBL top hitse value%identityAlignment
A0A0A0KNL6 RRM domain-containing protein1.7e-13292.31Show/hide
Query:  MTMIT-----SNNTNNAGLFGDTTLTKVFVGGLAWETPKEAMRYHFEKFGDILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNL
        MTM+T     +N++ NAGLFGDTTLTKVFVGGLAWETPKEAMR HF KFG+ILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNL
Subjt:  MTMIT-----SNNTNNAGLFGDTTLTKVFVGGLAWETPKEAMRYHFEKFGDILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNL

Query:  ASLGARRGGSRSASATPPQGPQPGSNGGGPRTTSPA-APGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLGYMNGHYTQMYPGQ
        ASLGARRGGSRSASATPPQ PQPGSN GGPRTTS A APGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLGYMNGHYTQMYPGQ
Subjt:  ASLGARRGGSRSASATPPQGPQPGSNGGGPRTTSPA-APGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLGYMNGHYTQMYPGQ

Query:  AMVGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTSAGPFAAVPPTSIMSKPASVGPNPG
        AMVGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPT+AGPFAAVPPTSIMSKP +VGPNPG
Subjt:  AMVGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTSAGPFAAVPPTSIMSKPASVGPNPG

A0A1S3BD62 probable RNA-binding protein ARP1 isoform X27.3e-13192.61Show/hide
Query:  MTMI--TSNNTNNAGLFGDTTLTKVFVGGLAWETPKEAMRYHFEKFGDILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASL
        MTM+  T+N+  NAGLFGDTTLTKVFVGGLAWETPKEAMR HF+KFG+ILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASL
Subjt:  MTMI--TSNNTNNAGLFGDTTLTKVFVGGLAWETPKEAMRYHFEKFGDILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASL

Query:  GARRGGSRSASATPPQGPQPGSNGGGPRTTSPA-APGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLGYMNGHYTQMYPGQ-AM
        GARRGGSRSASATPPQ PQPGSNGGGPRTT+ A APGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLGY+NGHYTQMYPGQ AM
Subjt:  GARRGGSRSASATPPQGPQPGSNGGGPRTTSPA-APGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLGYMNGHYTQMYPGQ-AM

Query:  VGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTSAGPFAAVPPTSIMSKPASVGPNP
        VGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPT+AGPFAAVPPTSIMSKP +VGPNP
Subjt:  VGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTSAGPFAAVPPTSIMSKPASVGPNP

A0A1S3BEI0 probable RNA-binding protein ARP1 isoform X11.9e-13192.64Show/hide
Query:  MTMI--TSNNTNNAGLFGDTTLTKVFVGGLAWETPKEAMRYHFEKFGDILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASL
        MTM+  T+N+  NAGLFGDTTLTKVFVGGLAWETPKEAMR HF+KFG+ILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASL
Subjt:  MTMI--TSNNTNNAGLFGDTTLTKVFVGGLAWETPKEAMRYHFEKFGDILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASL

Query:  GARRGGSRSASATPPQGPQPGSNGGGPRTTSPA-APGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLGYMNGHYTQMYPGQ-AM
        GARRGGSRSASATPPQ PQPGSNGGGPRTT+ A APGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLGY+NGHYTQMYPGQ AM
Subjt:  GARRGGSRSASATPPQGPQPGSNGGGPRTTSPA-APGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLGYMNGHYTQMYPGQ-AM

Query:  VGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTSAGPFAAVPPTSIMSKPASVGPNPG
        VGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPT+AGPFAAVPPTSIMSKP +VGPNPG
Subjt:  VGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTSAGPFAAVPPTSIMSKPASVGPNPG

A0A5A7SY01 Putative RNA-binding protein ARP1 isoform X17.8e-13391.95Show/hide
Query:  MTMI--TSNNTNNAGLFGDTTLTKVFVGGLAWETPKEAMRYHFEKFGDILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASL
        MTM+  T+N+  NAGLFGDTTLTKVFVGGLAWETPKEAMR HF+KFG+ILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASL
Subjt:  MTMI--TSNNTNNAGLFGDTTLTKVFVGGLAWETPKEAMRYHFEKFGDILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASL

Query:  GARRGGSRSASATPPQGPQPGSNGGGPRTTSPA-APGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLGYMNGHYTQMYPGQ-AM
        GARRGGSRSASATPPQ PQPGSNGGGPRTT+ A APGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLGY+NGHYTQMYPGQ AM
Subjt:  GARRGGSRSASATPPQGPQPGSNGGGPRTTSPA-APGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLGYMNGHYTQMYPGQ-AM

Query:  VGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTSAGPFAAVPPTSIMSKPASVGPNPGPFY
        VG NTLMPMYPLYHYHQSHAMGMPAHIFPPSPT+AGPFAAVPPTSIMSKP +VGPNPGPF+
Subjt:  VGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTSAGPFAAVPPTSIMSKPASVGPNPGPFY

A0A6J1CCJ5 probable RNA-binding protein ARP12.0e-12088.49Show/hide
Query:  SNNTNNAGL-FGDTTLTKVFVGGLAWETPKEAMRYHFEKFGDILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRGG
        SNN+NNAGL FGDTTLTKVFVGGLAWETPKEAMR HFEKFG+ILEAVIISDKLTGRSKGYGFVTFKDAESAKKACED+APIINGRRANCNLASLGARRG 
Subjt:  SNNTNNAGL-FGDTTLTKVFVGGLAWETPKEAMRYHFEKFGDILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRGG

Query:  SRSASATPPQGPQ-PGSNGGGPRTTSPAAPGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLGYMN--GHYTQMYPGQAMVGANT
          +++ATPPQ P  PGSNGGG   ++ AA  NHVQWYYPAGT PTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKL YMN  GHY+Q+YPGQAMVGANT
Subjt:  SRSASATPPQGPQ-PGSNGGGPRTTSPAAPGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLGYMN--GHYTQMYPGQAMVGANT

Query:  LMPMYPLYHYHQSHAMGMPAHIFPPSPTSAGPFAAVPPTSIMSKPASVGPNP
        LMPMYPLYHYHQSHAMGMPAHIFPPSPT+AGPFAAVPPTSIMSKPASVGPNP
Subjt:  LMPMYPLYHYHQSHAMGMPAHIFPPSPTSAGPFAAVPPTSIMSKPASVGPNP

SwissProt top hitse value%identityAlignment
Q5ZJX4 RNA-binding protein 381.4e-2258.82Show/hide
Query:  DTTLTKVFVGGLAWETPKEAMRYHFEKFGDILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGAR
        DTT TK+FVGGL + T   ++R +FE FGDI EAV+I+D+ TG+S+GYGFVT  D  +A++AC+D  PII+GR+AN NLA LGA+
Subjt:  DTTLTKVFVGGLAWETPKEAMRYHFEKFGDILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGAR

Q5ZMA3 RNA-binding protein 241.8e-2258.82Show/hide
Query:  DTTLTKVFVGGLAWETPKEAMRYHFEKFGDILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGAR
        DTT TK+FVGGL + T   ++R +FE FGDI EAV+I+D+ TG+S+GYGFVT  D  +A++AC+D  PII+GR+AN NLA LGA+
Subjt:  DTTLTKVFVGGLAWETPKEAMRYHFEKFGDILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGAR

Q6GQD3 RNA-binding protein 24-A1.8e-2258.82Show/hide
Query:  DTTLTKVFVGGLAWETPKEAMRYHFEKFGDILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGAR
        DTT TK+FVGGL + T   ++R +FE FGDI EAV+I+D+ TG+S+GYGFVT  D  +A++AC+D  PII+GR+AN NLA LGA+
Subjt:  DTTLTKVFVGGLAWETPKEAMRYHFEKFGDILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGAR

Q9I8B3 RNA-binding protein 24-B1.8e-2258.82Show/hide
Query:  DTTLTKVFVGGLAWETPKEAMRYHFEKFGDILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGAR
        DTT TK+FVGGL + T   ++R +FE FGDI EAV+I+D+ TG+S+GYGFVT  D  +A++AC+D  PII+GR+AN NLA LGA+
Subjt:  DTTLTKVFVGGLAWETPKEAMRYHFEKFGDILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGAR

Q9M1S3 Probable RNA-binding protein ARP13.0e-5753.03Show/hide
Query:  MITSNNTNNAGLFGDTTLTKVFVGGLAWETPKEAMRYHFEKFGDILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARR
        M TSNN N  G FGDT LTKVFVGGLAW+T KEAM  HF K+GDILEAVIISDKLT RSKGYGFVTFKDA++A +ACEDS PIINGRRANCNLASLG R 
Subjt:  MITSNNTNNAGLFGDTTLTKVFVGGLAWETPKEAMRYHFEKFGDILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARR

Query:  GGSRSASATPPQGPQPGSNGGGPRTTSPAAPGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLG-----YMNGHYTQMYP-----
          S + + +P QGP+ G+        +P   GNH QWYYP+G        Q HQ VPFYGY PS  Y+A ++++N K+G     YMNG+Y QM P     
Subjt:  GGSRSASATPPQGPQPGSNGGGPRTTSPAAPGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLG-----YMNGHYTQMYP-----

Query:  -------------GQAMVG-ANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTSAGPFA-AVPPTS
                     G+ MVG A+ ++P Y +Y YHQS A+G       P P+ + P + + PP S
Subjt:  -------------GQAMVG-ANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTSAGPFA-AVPPTS

Arabidopsis top hitse value%identityAlignment
AT1G22910.1 RNA-binding (RRM/RBD/RNP motifs) family protein3.9e-3642.17Show/hide
Query:  GDTTLTKVFVGGLAWETPKEAMRYHFEKFGDILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRGGSRSASATPPQG
        GDTT TKVFVGGLAWET KE M+ HFE+FG+ILEAV+I+DK +GRSKGYGFVTF++AE+A+ AC D+ P+I+GRRANCNLASLG +    RS  +TP   
Subjt:  GDTTLTKVFVGGLAWETPKEAMRYHFEKFGDILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRGGSRSASATPPQG

Query:  PQPGSNGGGPRTTSPAAPGNHVQWYY--PAGTHPTPFHHQPHQPVPFYGYSP-SPTYIATDISYNHKLGYMNGHYTQMY------PGQAMVGANTLMPMY
            ++GGG R  +     + +Q  +  P    P  F H PH P+  +GYSP SP Y +   +     G  +G    +Y       G     A +  P Y
Subjt:  PQPGSNGGGPRTTSPAAPGNHVQWYY--PAGTHPTPFHHQPHQPVPFYGYSP-SPTYIATDISYNHKLGYMNGHYTQMY------PGQAMVGANTLMPMY

Query:  PLYHYHQSHAMGMPAHIFPPSPTSAGPFAAVPPTSIMSKPASVGPNPGP
        P    H       P   F    +S  P    PPT  M +  +  P   P
Subjt:  PLYHYHQSHAMGMPAHIFPPSPTSAGPFAAVPPTSIMSKPASVGPNPGP

AT1G22910.2 RNA-binding (RRM/RBD/RNP motifs) family protein7.9e-3742.86Show/hide
Query:  GDTTLTKVFVGGLAWETPKEAMRYHFEKFGDILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRGGSRSASATPPQG
        GDTT TKVFVGGLAWET KE M+ HFE+FG+ILEAV+I+DK +GRSKGYGFVTF++AE+A+ AC D+ P+I+GRRANCNLASLG +    RS  +TP   
Subjt:  GDTTLTKVFVGGLAWETPKEAMRYHFEKFGDILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRGGSRSASATPPQG

Query:  PQPGSNGGGPRTTSPAAPGNHVQWYY--PAGTHPTPFHHQPHQPVPFYGYSP-SPTYIATDISYNHKLGYMNGHYTQMY------PGQAMVGANTLMPMY
            ++GGG R  +     + +Q  +  P    P  F H PH P+  +GYSP SP Y +   +     G  +G    +Y       G     A +  P Y
Subjt:  PQPGSNGGGPRTTSPAAPGNHVQWYY--PAGTHPTPFHHQPHQPVPFYGYSP-SPTYIATDISYNHKLGYMNGHYTQMY------PGQAMVGANTLMPMY

Query:  PLYHYHQSHAMGMPAHIFPPSPTSAGPFAAVPPTSIMSKPASVGP
        P    H       P   F    +S  P    PPT  M +   V P
Subjt:  PLYHYHQSHAMGMPAHIFPPSPTSAGPFAAVPPTSIMSKPASVGP

AT1G22910.3 RNA-binding (RRM/RBD/RNP motifs) family protein7.9e-3743.1Show/hide
Query:  GDTTLTKVFVGGLAWETPKEAMRYHFEKFGDILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRGGSRSASATPPQG
        GDTT TKVFVGGLAWET KE M+ HFE+FG+ILEAV+I+DK +GRSKGYGFVTF++AE+A+ AC D+ P+I+GRRANCNLASLG +    RS  +TP   
Subjt:  GDTTLTKVFVGGLAWETPKEAMRYHFEKFGDILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRGGSRSASATPPQG

Query:  PQPGSNGGGPRTTSPAAPGNHVQWYY--PAGTHPTPFHHQPHQPVPFYGYSP-SPTYIATDISYNHKLGYMNGHYTQMY------PGQAMVGANTLMPMY
            ++GGG R  +     + +Q  +  P    P  F H PH P+  +GYSP SP Y +   +     G  +G    +Y       G     A +  P Y
Subjt:  PQPGSNGGGPRTTSPAAPGNHVQWYY--PAGTHPTPFHHQPHQPVPFYGYSP-SPTYIATDISYNHKLGYMNGHYTQMY------PGQAMVGANTLMPMY

Query:  PLYHYHQSHAMGMPAHIFPPSPTSAGPFAAVPPTSIMSK
        P    H       P   F    +S  P    PPT  M +
Subjt:  PLYHYHQSHAMGMPAHIFPPSPTSAGPFAAVPPTSIMSK

AT3G54770.1 RNA-binding (RRM/RBD/RNP motifs) family protein2.1e-5853.03Show/hide
Query:  MITSNNTNNAGLFGDTTLTKVFVGGLAWETPKEAMRYHFEKFGDILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARR
        M TSNN N  G FGDT LTKVFVGGLAW+T KEAM  HF K+GDILEAVIISDKLT RSKGYGFVTFKDA++A +ACEDS PIINGRRANCNLASLG R 
Subjt:  MITSNNTNNAGLFGDTTLTKVFVGGLAWETPKEAMRYHFEKFGDILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARR

Query:  GGSRSASATPPQGPQPGSNGGGPRTTSPAAPGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLG-----YMNGHYTQMYP-----
          S + + +P QGP+ G+        +P   GNH QWYYP+G        Q HQ VPFYGY PS  Y+A ++++N K+G     YMNG+Y QM P     
Subjt:  GGSRSASATPPQGPQPGSNGGGPRTTSPAAPGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLG-----YMNGHYTQMYP-----

Query:  -------------GQAMVG-ANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTSAGPFA-AVPPTS
                     G+ MVG A+ ++P Y +Y YHQS A+G       P P+ + P + + PP S
Subjt:  -------------GQAMVG-ANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTSAGPFA-AVPPTS

AT3G54770.2 RNA-binding (RRM/RBD/RNP motifs) family protein5.6e-4348.46Show/hide
Query:  HFEKFGDILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRGGSRSASATPPQGPQPGSNGGGPRTTSPAAPGNHVQW
        HF K+GDILEAVIISDKLT RSKGYGFVTFKDA++A +ACEDS PIINGRRANCNLASLG R        ATPP                    GNH QW
Subjt:  HFEKFGDILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRGGSRSASATPPQGPQPGSNGGGPRTTSPAAPGNHVQW

Query:  YYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLG-----YMNGHYTQMYP------------------GQAMVG-ANTLMPMYPLYHYHQSH
        YYP+G        Q HQ VPFYGY PS  Y+A ++++N K+G     YMNG+Y QM P                  G+ MVG A+ ++P Y +Y YHQS 
Subjt:  YYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLG-----YMNGHYTQMYP------------------GQAMVG-ANTLMPMYPLYHYHQSH

Query:  AMGMPAHIFPPSPTSAGPFA-AVPPTS
        A+G       P P+ + P + + PP S
Subjt:  AMGMPAHIFPPSPTSAGPFA-AVPPTS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACCATGATCACCAGCAATAATACTAATAATGCAGGTTTGTTCGGCGACACCACCTTGACGAAGGTCTTCGTTGGGGGATTAGCTTGGGAGACTCCAAAGGAAGCCAT
GAGATATCACTTCGAGAAGTTTGGTGACATTCTGGAGGCGGTTATCATTTCCGATAAACTCACCGGCAGATCCAAGGGCTATGGATTCGTTACATTCAAGGACGCGGAAT
CGGCCAAGAAAGCTTGTGAGGATTCGGCTCCGATCATCAATGGCCGTCGAGCTAACTGTAATCTGGCTTCGCTTGGAGCTCGGCGCGGCGGCTCTAGGTCGGCTTCGGCT
ACTCCTCCCCAAGGTCCTCAACCAGGATCCAACGGTGGAGGACCGAGGACGACGTCACCAGCCGCACCGGGAAATCACGTGCAGTGGTACTACCCGGCGGGGACTCATCC
CACGCCGTTTCATCATCAGCCTCATCAGCCCGTCCCTTTCTATGGATACTCCCCAAGCCCCACTTACATCGCCACCGATATCAGTTACAACCACAAGCTGGGGTATATGA
ACGGGCATTACACGCAGATGTATCCAGGGCAGGCTATGGTAGGGGCGAACACATTGATGCCAATGTACCCGCTGTATCATTACCATCAATCACACGCGATGGGGATGCCG
GCCCACATTTTCCCTCCTAGTCCCACGTCGGCGGGCCCATTCGCCGCAGTCCCACCTACTTCCATTATGTCCAAACCGGCCTCCGTTGGTCCCAACCCAGGTCCATTTTA
CTGTAACTCATCAACTTAA
mRNA sequenceShow/hide mRNA sequence
ATGACCATGATCACCAGCAATAATACTAATAATGCAGGTTTGTTCGGCGACACCACCTTGACGAAGGTCTTCGTTGGGGGATTAGCTTGGGAGACTCCAAAGGAAGCCAT
GAGATATCACTTCGAGAAGTTTGGTGACATTCTGGAGGCGGTTATCATTTCCGATAAACTCACCGGCAGATCCAAGGGCTATGGATTCGTTACATTCAAGGACGCGGAAT
CGGCCAAGAAAGCTTGTGAGGATTCGGCTCCGATCATCAATGGCCGTCGAGCTAACTGTAATCTGGCTTCGCTTGGAGCTCGGCGCGGCGGCTCTAGGTCGGCTTCGGCT
ACTCCTCCCCAAGGTCCTCAACCAGGATCCAACGGTGGAGGACCGAGGACGACGTCACCAGCCGCACCGGGAAATCACGTGCAGTGGTACTACCCGGCGGGGACTCATCC
CACGCCGTTTCATCATCAGCCTCATCAGCCCGTCCCTTTCTATGGATACTCCCCAAGCCCCACTTACATCGCCACCGATATCAGTTACAACCACAAGCTGGGGTATATGA
ACGGGCATTACACGCAGATGTATCCAGGGCAGGCTATGGTAGGGGCGAACACATTGATGCCAATGTACCCGCTGTATCATTACCATCAATCACACGCGATGGGGATGCCG
GCCCACATTTTCCCTCCTAGTCCCACGTCGGCGGGCCCATTCGCCGCAGTCCCACCTACTTCCATTATGTCCAAACCGGCCTCCGTTGGTCCCAACCCAGGTCCATTTTA
CTGTAACTCATCAACTTAA
Protein sequenceShow/hide protein sequence
MTMITSNNTNNAGLFGDTTLTKVFVGGLAWETPKEAMRYHFEKFGDILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRGGSRSASA
TPPQGPQPGSNGGGPRTTSPAAPGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLGYMNGHYTQMYPGQAMVGANTLMPMYPLYHYHQSHAMGMP
AHIFPPSPTSAGPFAAVPPTSIMSKPASVGPNPGPFYCNSST