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HG10015004 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10015004
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionGRAM domain-containing protein
Genome locationChr02:22860679..22861314
RNA-Seq ExpressionHG10015004
SyntenyHG10015004
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0004252 - serine-type endopeptidase activity (molecular function)
InterPro domainsIPR011993 - PH-like domain superfamily
IPR037848 - GEM-like protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008445894.1 PREDICTED: GEM-like protein 4 [Cucumis melo]3.1e-1336.19Show/hide
Query:  MLGIQMSLALARARYLGAPSRHLHISSSDDGSQ-SIKK-----C------------------------------------------------------KR
        MLG QMSLAL+RARYLG P + LH+SSSDDGSQ SIKK     C                                                      K 
Subjt:  MLGIQMSLALARARYLGAPSRHLHISSSDDGSQ-SIKK-----C------------------------------------------------------KR

Query:  YIRRRRRK-------------------------------------------------KVVIPKEKVKSVNESENNVEKGSEKYIEIGTMDDFEFWFMGFL
        +      K                                                 KVVIPKEKV  VNESE NV+K SEKYI+I T+D+FEFWFMGFL
Subjt:  YIRRRRRK-------------------------------------------------KVVIPKEKVKSVNESENNVEKGSEKYIEIGTMDDFEFWFMGFL

Query:  NYQSTFNSLR
        NYQSTFNSL+
Subjt:  NYQSTFNSLR

XP_008465496.1 PREDICTED: GEM-like protein 4 [Cucumis melo]1.4e-1378.95Show/hide
Query:  KVVIPKEKVKSVNESENNVEKGSEKYIEIGTMDDFEFWFMGFLNYQSTFNSLRGVDR
        KVVIPKEKV  VNESE NV+K SEKYI+I T+D+FEFWFMGFLNYQSTFNSL+ V R
Subjt:  KVVIPKEKVKSVNESENNVEKGSEKYIEIGTMDDFEFWFMGFLNYQSTFNSLRGVDR

XP_022999512.1 putative GEM-like protein 8 [Cucurbita maxima]3.1e-1334.11Show/hide
Query:  MLGIQMSLALARARYLGAPSRHLHISSSDDGSQSIKKC--KRYIRRRRRK--------------------------------------------------
        +LG+Q+SLALARAR+L  PS+HLH+SS DDGSQSI+K   K +I  R  K                                                  
Subjt:  MLGIQMSLALARARYLGAPSRHLHISSSDDGSQSIKKC--KRYIRRRRRK--------------------------------------------------

Query:  ---------------------------------------------------------KVVIPKEKVKSVNESENNVEKGSEKYIEIGTMDDFEFWFMGFL
                                                                 KVVIP EKV  VNESE NV+K S+KYI+I T+D FEFWFMGFL
Subjt:  ---------------------------------------------------------KVVIPKEKVKSVNESENNVEKGSEKYIEIGTMDDFEFWFMGFL

Query:  NYQSTFNSLRGVDR
        NYQSTFNSL+ + R
Subjt:  NYQSTFNSLRGVDR

XP_023513116.1 putative GEM-like protein 8 [Cucurbita pepo subsp. pepo]4.1e-1334.11Show/hide
Query:  MLGIQMSLALARARYLGAPSRHLHISSSDDGSQSIKKC--KRYIRRRRRK--------------------------------------------------
        +LG+Q+SLALARAR+L  PS+HLHISS DDGSQSI+K   K +I  R  K                                                  
Subjt:  MLGIQMSLALARARYLGAPSRHLHISSSDDGSQSIKKC--KRYIRRRRRK--------------------------------------------------

Query:  ---------------------------------------------------------KVVIPKEKVKSVNESENNVEKGSEKYIEIGTMDDFEFWFMGFL
                                                                 KVVIP EKV  VNESE NV+K S+KYI+I T+D FEFWFMGFL
Subjt:  ---------------------------------------------------------KVVIPKEKVKSVNESENNVEKGSEKYIEIGTMDDFEFWFMGFL

Query:  NYQSTFNSLRGVDR
        NYQSTFNS + + R
Subjt:  NYQSTFNSLRGVDR

XP_038893152.1 GEM-like protein 4 [Benincasa hispida]3.7e-1437.26Show/hide
Query:  MLGIQMSLALARARYLGAPSRHLHISSSDDGSQSIKKC--KRYIRRRRRK--------------------------------------------------
        ML  QMSLAL RARYLG PSRH H SSSDDGSQSI+K   K +I  R  K                                                  
Subjt:  MLGIQMSLALARARYLGAPSRHLHISSSDDGSQSIKKC--KRYIRRRRRK--------------------------------------------------

Query:  ----------------------------------------------------KVVIPKEKVKSVNESENNVEKGSEKYIEIGTMDDFEFWFMGFLNYQST
                                                            KVVIPKEKV  VNESE NV+K SEKYI+I TMD+FEFW  GFLNYQST
Subjt:  ----------------------------------------------------KVVIPKEKVKSVNESENNVEKGSEKYIEIGTMDDFEFWFMGFLNYQST

Query:  FNSL-RGVDRRL
        FN L + V+RRL
Subjt:  FNSL-RGVDRRL

TrEMBL top hitse value%identityAlignment
A0A0A0KT32 GRAM domain-containing protein2.6e-1377.19Show/hide
Query:  KVVIPKEKVKSVNESENNVEKGSEKYIEIGTMDDFEFWFMGFLNYQSTFNSLRGVDR
        KVVIPKEKV  VNESE NV+K SE+YI+I T+D+FEFWFMGFLNYQSTFNSL+ V R
Subjt:  KVVIPKEKVKSVNESENNVEKGSEKYIEIGTMDDFEFWFMGFLNYQSTFNSLRGVDR

A0A1S3BEG1 GEM-like protein 41.5e-1336.19Show/hide
Query:  MLGIQMSLALARARYLGAPSRHLHISSSDDGSQ-SIKK-----C------------------------------------------------------KR
        MLG QMSLAL+RARYLG P + LH+SSSDDGSQ SIKK     C                                                      K 
Subjt:  MLGIQMSLALARARYLGAPSRHLHISSSDDGSQ-SIKK-----C------------------------------------------------------KR

Query:  YIRRRRRK-------------------------------------------------KVVIPKEKVKSVNESENNVEKGSEKYIEIGTMDDFEFWFMGFL
        +      K                                                 KVVIPKEKV  VNESE NV+K SEKYI+I T+D+FEFWFMGFL
Subjt:  YIRRRRRK-------------------------------------------------KVVIPKEKVKSVNESENNVEKGSEKYIEIGTMDDFEFWFMGFL

Query:  NYQSTFNSLR
        NYQSTFNSL+
Subjt:  NYQSTFNSLR

A0A1S3CNX8 GEM-like protein 46.8e-1478.95Show/hide
Query:  KVVIPKEKVKSVNESENNVEKGSEKYIEIGTMDDFEFWFMGFLNYQSTFNSLRGVDR
        KVVIPKEKV  VNESE NV+K SEKYI+I T+D+FEFWFMGFLNYQSTFNSL+ V R
Subjt:  KVVIPKEKVKSVNESENNVEKGSEKYIEIGTMDDFEFWFMGFLNYQSTFNSLRGVDR

A0A5A7SSL2 GEM-like protein 46.8e-1478.95Show/hide
Query:  KVVIPKEKVKSVNESENNVEKGSEKYIEIGTMDDFEFWFMGFLNYQSTFNSLRGVDR
        KVVIPKEKV  VNESE NV+K SEKYI+I T+D+FEFWFMGFLNYQSTFNSL+ V R
Subjt:  KVVIPKEKVKSVNESENNVEKGSEKYIEIGTMDDFEFWFMGFLNYQSTFNSLRGVDR

A0A6J1KB26 putative GEM-like protein 81.5e-1334.11Show/hide
Query:  MLGIQMSLALARARYLGAPSRHLHISSSDDGSQSIKKC--KRYIRRRRRK--------------------------------------------------
        +LG+Q+SLALARAR+L  PS+HLH+SS DDGSQSI+K   K +I  R  K                                                  
Subjt:  MLGIQMSLALARARYLGAPSRHLHISSSDDGSQSIKKC--KRYIRRRRRK--------------------------------------------------

Query:  ---------------------------------------------------------KVVIPKEKVKSVNESENNVEKGSEKYIEIGTMDDFEFWFMGFL
                                                                 KVVIP EKV  VNESE NV+K S+KYI+I T+D FEFWFMGFL
Subjt:  ---------------------------------------------------------KVVIPKEKVKSVNESENNVEKGSEKYIEIGTMDDFEFWFMGFL

Query:  NYQSTFNSLRGVDR
        NYQSTFNSL+ + R
Subjt:  NYQSTFNSLRGVDR

SwissProt top hitse value%identityAlignment
Q9FMW4 Putative GEM-like protein 82.4e-0855.77Show/hide
Query:  KVVIPKEKVKSVNESENNVEKGSEKYIEIGTMDDFEFWFMGFLNYQSTFNSL
        KV IP  K+  VN+S+N   K S+KY+E+ T+D F+FWFMGFL+YQ  FN L
Subjt:  KVVIPKEKVKSVNESENNVEKGSEKYIEIGTMDDFEFWFMGFLNYQSTFNSL

Q9FMW5 GEM-like protein 71.6e-0750Show/hide
Query:  KVVIPKEKVKSVNESENNVEKGSEKYIEIGTMDDFEFWFMGFLNYQSTFNSL
        KV IP  K+  VN+S+ N +K S++Y+E+ T+D+++FWFMGF++YQ  FN L
Subjt:  KVVIPKEKVKSVNESENNVEKGSEKYIEIGTMDDFEFWFMGFLNYQSTFNSL

Q9FMW6 GEM-like protein 62.4e-0855.77Show/hide
Query:  KVVIPKEKVKSVNESENNVEKGSEKYIEIGTMDDFEFWFMGFLNYQSTFNSL
        KV IP  K+  VN+S+ N +K S+KY+EI T+D+F+FWFMGF++YQ  FN L
Subjt:  KVVIPKEKVKSVNESENNVEKGSEKYIEIGTMDDFEFWFMGFLNYQSTFNSL

Q9FTA0 GEM-like protein 44.1e-0855.77Show/hide
Query:  KVVIPKEKVKSVNESENNVEKGSEKYIEIGTMDDFEFWFMGFLNYQSTFNSL
        KV IP  K+  VN+S+ N +K S+KY+E+ T+D F+FWFMGFL+YQ  FN L
Subjt:  KVVIPKEKVKSVNESENNVEKGSEKYIEIGTMDDFEFWFMGFLNYQSTFNSL

Q9M063 Putative GEM-like protein 37.7e-0753.85Show/hide
Query:  VVIPKEKVKSVNESENNVEKGSEKYIEIGTMDDFEFWFMGFLNYQSTFNSLR
        VVIP  ++KSVN S + V   +EKYI++ ++DD EFWFMGFLNY+    SL+
Subjt:  VVIPKEKVKSVNESENNVEKGSEKYIEIGTMDDFEFWFMGFLNYQSTFNSLR

Arabidopsis top hitse value%identityAlignment
AT4G40100.1 GRAM domain family protein5.5e-0853.85Show/hide
Query:  VVIPKEKVKSVNESENNVEKGSEKYIEIGTMDDFEFWFMGFLNYQSTFNSLR
        VVIP  ++KSVN S + V   +EKYI++ ++DD EFWFMGFLNY+    SL+
Subjt:  VVIPKEKVKSVNESENNVEKGSEKYIEIGTMDDFEFWFMGFLNYQSTFNSLR

AT5G08350.1 GRAM domain-containing protein / ABA-responsive protein-related2.9e-0955.77Show/hide
Query:  KVVIPKEKVKSVNESENNVEKGSEKYIEIGTMDDFEFWFMGFLNYQSTFNSL
        KV IP  K+  VN+S+ N +K S+KY+E+ T+D F+FWFMGFL+YQ  FN L
Subjt:  KVVIPKEKVKSVNESENNVEKGSEKYIEIGTMDDFEFWFMGFLNYQSTFNSL

AT5G23350.1 GRAM domain-containing protein / ABA-responsive protein-related1.7e-0955.77Show/hide
Query:  KVVIPKEKVKSVNESENNVEKGSEKYIEIGTMDDFEFWFMGFLNYQSTFNSL
        KV IP  K+  VN+S+ N +K S+KY+EI T+D+F+FWFMGF++YQ  FN L
Subjt:  KVVIPKEKVKSVNESENNVEKGSEKYIEIGTMDDFEFWFMGFLNYQSTFNSL

AT5G23360.1 GRAM domain-containing protein / ABA-responsive protein-related1.1e-0850Show/hide
Query:  KVVIPKEKVKSVNESENNVEKGSEKYIEIGTMDDFEFWFMGFLNYQSTFNSL
        KV IP  K+  VN+S+ N +K S++Y+E+ T+D+++FWFMGF++YQ  FN L
Subjt:  KVVIPKEKVKSVNESENNVEKGSEKYIEIGTMDDFEFWFMGFLNYQSTFNSL

AT5G23370.1 GRAM domain-containing protein / ABA-responsive protein-related1.7e-0955.77Show/hide
Query:  KVVIPKEKVKSVNESENNVEKGSEKYIEIGTMDDFEFWFMGFLNYQSTFNSL
        KV IP  K+  VN+S+N   K S+KY+E+ T+D F+FWFMGFL+YQ  FN L
Subjt:  KVVIPKEKVKSVNESENNVEKGSEKYIEIGTMDDFEFWFMGFLNYQSTFNSL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGGGAATTCAGATGTCATTGGCTCTTGCAAGAGCTAGATATTTGGGTGCTCCCTCCAGGCATCTCCACATATCTTCTTCAGATGATGGATCTCAATCAATTAAGAA
ATGTAAGAGATATATAAGAAGAAGAAGAAGAAAGAAAGTTGTGATTCCAAAGGAGAAGGTGAAGAGTGTAAATGAAAGTGAGAATAATGTTGAGAAAGGTTCAGAAAAGT
ACATAGAAATAGGGACAATGGACGACTTTGAATTTTGGTTTATGGGTTTTCTAAATTATCAATCAACTTTCAACTCTCTTCGAGGAGTAGACAGAAGACTGGGCTACAGA
TGA
mRNA sequenceShow/hide mRNA sequence
ATGTTGGGAATTCAGATGTCATTGGCTCTTGCAAGAGCTAGATATTTGGGTGCTCCCTCCAGGCATCTCCACATATCTTCTTCAGATGATGGATCTCAATCAATTAAGAA
ATGTAAGAGATATATAAGAAGAAGAAGAAGAAAGAAAGTTGTGATTCCAAAGGAGAAGGTGAAGAGTGTAAATGAAAGTGAGAATAATGTTGAGAAAGGTTCAGAAAAGT
ACATAGAAATAGGGACAATGGACGACTTTGAATTTTGGTTTATGGGTTTTCTAAATTATCAATCAACTTTCAACTCTCTTCGAGGAGTAGACAGAAGACTGGGCTACAGA
TGA
Protein sequenceShow/hide protein sequence
MLGIQMSLALARARYLGAPSRHLHISSSDDGSQSIKKCKRYIRRRRRKKVVIPKEKVKSVNESENNVEKGSEKYIEIGTMDDFEFWFMGFLNYQSTFNSLRGVDRRLGYR