; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10015051 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10015051
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionCarbamoyl-phosphate synthase small chain
Genome locationChr02:23374473..23377647
RNA-Seq ExpressionHG10015051
SyntenyHG10015051
Gene Ontology termsGO:0006207 - 'de novo' pyrimidine nucleobase biosynthetic process (biological process)
GO:0006526 - arginine biosynthetic process (biological process)
GO:0006541 - glutamine metabolic process (biological process)
GO:0005951 - carbamoyl-phosphate synthase complex (cellular component)
GO:0004088 - carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity (molecular function)
InterPro domainsIPR002474 - Carbamoyl-phosphate synthase small subunit, N-terminal domain
IPR017926 - Glutamine amidotransferase
IPR029062 - Class I glutamine amidotransferase-like
IPR036480 - Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008445953.1 PREDICTED: carbamoyl-phosphate synthase small chain, chloroplastic [Cucumis melo]2.6e-17877.8Show/hide
Query:  MAIRVMDLVSGASLNCFHFKNPKGYVKSRDFSIRCSVPLSSSHGAATIDLGERPWKVSDARLVLEDGSVWRAKSFGASGTQVGEVVFNTSLTGYQEILTD
        MAIRVMDLVSGASLNCFHFKNPKG VKSR FSIRCSVPLSSS GAATIDLGERPWKVSDARLVLEDGSVW+AKSFGASGTQVGEVVFNTSLTGYQEILTD
Subjt:  MAIRVMDLVSGASLNCFHFKNPKGYVKSRDFSIRCSVPLSSSHGAATIDLGERPWKVSDARLVLEDGSVWRAKSFGASGTQVGEVVFNTSLTGYQEILTD

Query:  PSYAGQFVLMTNPHIGNTGVNFDDEEARQCFLAGLVIRSLSFSTSNWRCKQTLGDYLTERNIMGIYDVDTRAITRRLREDGSLIGVLSTEKSKSDDELLE
        PSYAGQFVLMTNPHIGNTGVNFDDEEARQCFLAGLVIRSLS STSNWRCKQTLGDYL ERNIMGIYDVDTRAITRRLREDGSLIGVLSTEKSKSDDELLE
Subjt:  PSYAGQFVLMTNPHIGNTGVNFDDEEARQCFLAGLVIRSLSFSTSNWRCKQTLGDYLTERNIMGIYDVDTRAITRRLREDGSLIGVLSTEKSKSDDELLE

Query:  MSRSWDIVGVDLISGVSCKSPYEWVDRTDLEWEFKSGGYSSETFH-------------------------------------------------------
        MSRSW+IVGVDLISGVSCKSPYEWVDRTDLEWEFKSGG+SSETFH                                                       
Subjt:  MSRSWDIVGVDLISGVSCKSPYEWVDRTDLEWEFKSGGYSSETFH-------------------------------------------------------

Query:  ----------------------------ALGGKTFKMKFGHHGGNHPVRNFRNDRVEISAQNHNYAVDPASLPEGVEVTHINLNDGSCAGLAFPKLKIMS
                                    ALGGKTFKMKFGHHGGNHPVRNFRNDRVEISAQNHNYAVDPASLPEGVEVTHINLNDGSCAGLAFPKLKIMS
Subjt:  ----------------------------ALGGKTFKMKFGHHGGNHPVRNFRNDRVEISAQNHNYAVDPASLPEGVEVTHINLNDGSCAGLAFPKLKIMS

Query:  LQYHPEASPGPHDSDSGSG
        LQYHPEASPGPHDSDS  G
Subjt:  LQYHPEASPGPHDSDSGSG

XP_022957422.1 carbamoyl-phosphate synthase small chain, chloroplastic-like [Cucurbita moschata]1.5e-17877.33Show/hide
Query:  MAIRVMDLVSGASLNCFHFKNPKGYVKSRDFSIRCSVPLSSSHGAATIDLGERPWKVSDARLVLEDGSVWRAKSFGASGTQVGEVVFNTSLTGYQEILTD
        MAIRVMDLVSG SLNCFHFKNPKG+ KSRDFSIRCSVPLSSSHGAATIDLGERPWKVSDARLVLEDGS+WRAKSFGASGTQVGEVVFNTSLTGYQEILTD
Subjt:  MAIRVMDLVSGASLNCFHFKNPKGYVKSRDFSIRCSVPLSSSHGAATIDLGERPWKVSDARLVLEDGSVWRAKSFGASGTQVGEVVFNTSLTGYQEILTD

Query:  PSYAGQFVLMTNPHIGNTGVNFDDEEARQCFLAGLVIRSLSFSTSNWRCKQTLGDYLTERNIMGIYDVDTRAITRRLREDGSLIGVLSTEKSKSDDELLE
        PSYAGQFVLMTNPHIGNTGVNFDDEEAR+CFLAGLVIRSLS STSNWRCKQTLGDYLTERNIMGIYDVDTRAITRRLREDGSLIGVLSTEKSKSDDELLE
Subjt:  PSYAGQFVLMTNPHIGNTGVNFDDEEARQCFLAGLVIRSLSFSTSNWRCKQTLGDYLTERNIMGIYDVDTRAITRRLREDGSLIGVLSTEKSKSDDELLE

Query:  MSRSWDIVGVDLISGVSCKSPYEWVDRTDLEWEFKSGGYSSETFH-------------------------------------------------------
        MSRSWDIVGVDLISGVSCKSPYEWV+RT LEWEFKSGG+SSETFH                                                       
Subjt:  MSRSWDIVGVDLISGVSCKSPYEWVDRTDLEWEFKSGGYSSETFH-------------------------------------------------------

Query:  ----------------------------ALGGKTFKMKFGHHGGNHPVRNFRNDRVEISAQNHNYAVDPASLPEGVEVTHINLNDGSCAGLAFPKLKIMS
                                    ALGGKTFKMKFGHHGGNHPVRNFR+DRVEISAQNHNYAVDPASLPEGVEVTHINLNDGSCAGLAFPKLKIMS
Subjt:  ----------------------------ALGGKTFKMKFGHHGGNHPVRNFRNDRVEISAQNHNYAVDPASLPEGVEVTHINLNDGSCAGLAFPKLKIMS

Query:  LQYHPEASPGPHDSDSGSG
        LQYHPEASPGPHDSDS  G
Subjt:  LQYHPEASPGPHDSDSGSG

XP_023514547.1 carbamoyl-phosphate synthase small chain, chloroplastic-like [Cucurbita pepo subsp. pepo]4.0e-17977.57Show/hide
Query:  MAIRVMDLVSGASLNCFHFKNPKGYVKSRDFSIRCSVPLSSSHGAATIDLGERPWKVSDARLVLEDGSVWRAKSFGASGTQVGEVVFNTSLTGYQEILTD
        MAIRVMDLVSG SLNCFHFKNPKG+ KSRDFSIRCSVPLSSSHGAATIDLGERPWKVSDARLVLEDGS+WRAKSFGASGTQVGEVVFNTSLTGYQEILTD
Subjt:  MAIRVMDLVSGASLNCFHFKNPKGYVKSRDFSIRCSVPLSSSHGAATIDLGERPWKVSDARLVLEDGSVWRAKSFGASGTQVGEVVFNTSLTGYQEILTD

Query:  PSYAGQFVLMTNPHIGNTGVNFDDEEARQCFLAGLVIRSLSFSTSNWRCKQTLGDYLTERNIMGIYDVDTRAITRRLREDGSLIGVLSTEKSKSDDELLE
        PSYAGQFVLMTNPHIGNTGVNFDDEEAR+CFLAGLVIRSLS STSNWRCKQTLGDYLTERNIMGIYDVDTRAITRRLREDGSLIGVLSTEKSKSDDELLE
Subjt:  PSYAGQFVLMTNPHIGNTGVNFDDEEARQCFLAGLVIRSLSFSTSNWRCKQTLGDYLTERNIMGIYDVDTRAITRRLREDGSLIGVLSTEKSKSDDELLE

Query:  MSRSWDIVGVDLISGVSCKSPYEWVDRTDLEWEFKSGGYSSETFH-------------------------------------------------------
        MSRSWDIVGVDLISGVSCKSPYEWVDRT LEWEFKSGG+SSETFH                                                       
Subjt:  MSRSWDIVGVDLISGVSCKSPYEWVDRTDLEWEFKSGGYSSETFH-------------------------------------------------------

Query:  ----------------------------ALGGKTFKMKFGHHGGNHPVRNFRNDRVEISAQNHNYAVDPASLPEGVEVTHINLNDGSCAGLAFPKLKIMS
                                    ALGGKTFKMKFGHHGGNHPVRNFR+DRVEISAQNHNYAVDPASLPEGVEVTHINLNDGSCAGLAFPKLKIMS
Subjt:  ----------------------------ALGGKTFKMKFGHHGGNHPVRNFRNDRVEISAQNHNYAVDPASLPEGVEVTHINLNDGSCAGLAFPKLKIMS

Query:  LQYHPEASPGPHDSDSGSG
        LQYHPEASPGPHDSDS  G
Subjt:  LQYHPEASPGPHDSDSGSG

XP_038893404.1 carbamoyl-phosphate synthase small chain, chloroplastic isoform X1 [Benincasa hispida]8.8e-17977.64Show/hide
Query:  MAIRVMDLVSGASLNCFHFKNPKGYVKSRDFSIRCSVPLSSSHGAATIDLGERPWKVSDARLVLEDGSVWRAKSFGASGTQVGEVVFNTSLTGYQEILTD
        MAIRVMDLVSGAS NCFHFKN KGYVKSRDFSIRCSVPLSS+HGAATIDLGERPWKVSDARLVLEDGS+WRAKSFGASGTQVGEVVFNTSLTGYQEILTD
Subjt:  MAIRVMDLVSGASLNCFHFKNPKGYVKSRDFSIRCSVPLSSSHGAATIDLGERPWKVSDARLVLEDGSVWRAKSFGASGTQVGEVVFNTSLTGYQEILTD

Query:  PSYAGQFVLMTNPHIGNTGVNFDDEEARQCFLAGLVIRSLSFSTSNWRCKQTLGDYLTERNIMGIYDVDTRAITRRLREDGSLIGVLSTEKSKSDDELLE
        PSYAGQFVLMTNPHIGNTGVNFDDEEARQCFLAGLVIRSLS STSNWRCKQTLGDYL ERNIMGIYDVDTRAITRRLREDGSLIGVLSTEKSKSDDELLE
Subjt:  PSYAGQFVLMTNPHIGNTGVNFDDEEARQCFLAGLVIRSLSFSTSNWRCKQTLGDYLTERNIMGIYDVDTRAITRRLREDGSLIGVLSTEKSKSDDELLE

Query:  MSRSWDIVGVDLISGVSCKSPYEWVDRTDLEWEFKSGGYSSETFH-------------------------------------------------------
        MSRSWDIVGVDLISGVSCKSPYEWVDRTD EWEFKSGGYSS+TFH                                                       
Subjt:  MSRSWDIVGVDLISGVSCKSPYEWVDRTDLEWEFKSGGYSSETFH-------------------------------------------------------

Query:  ----------------------------ALGGKTFKMKFGHHGGNHPVRNFRNDRVEISAQNHNYAVDPASLPEGVEVTHINLNDGSCAGLAFPKLKIMS
                                    ALGGKTFKMKFGHHGGNHPVRNFRN+RVEISAQNHNYA+DPASLPEGVEVTHINLNDGSCAGLAFPKLKIMS
Subjt:  ----------------------------ALGGKTFKMKFGHHGGNHPVRNFRNDRVEISAQNHNYAVDPASLPEGVEVTHINLNDGSCAGLAFPKLKIMS

Query:  LQYHPEASPGPHDSDS
        LQYHPEASPGPHDSDS
Subjt:  LQYHPEASPGPHDSDS

XP_038893406.1 carbamoyl-phosphate synthase small chain, chloroplastic isoform X2 [Benincasa hispida]8.8e-17977.33Show/hide
Query:  MAIRVMDLVSGASLNCFHFKNPKGYVKSRDFSIRCSVPLSSSHGAATIDLGERPWKVSDARLVLEDGSVWRAKSFGASGTQVGEVVFNTSLTGYQEILTD
        MAIRVMDLVSGAS NCFHFKN KGYVKSRDFSIRCSVPLSS+HGAATIDLGERPWKVSDARLVLEDGS+WRAKSFGASGTQVGEVVFNTSLTGYQEILTD
Subjt:  MAIRVMDLVSGASLNCFHFKNPKGYVKSRDFSIRCSVPLSSSHGAATIDLGERPWKVSDARLVLEDGSVWRAKSFGASGTQVGEVVFNTSLTGYQEILTD

Query:  PSYAGQFVLMTNPHIGNTGVNFDDEEARQCFLAGLVIRSLSFSTSNWRCKQTLGDYLTERNIMGIYDVDTRAITRRLREDGSLIGVLSTEKSKSDDELLE
        PSYAGQFVLMTNPHIGNTGVNFDDEEARQCFLAGLVIRSLS STSNWRCKQTLGDYL ERNIMGIYDVDTRAITRRLREDGSLIGVLSTEKSKSDDELLE
Subjt:  PSYAGQFVLMTNPHIGNTGVNFDDEEARQCFLAGLVIRSLSFSTSNWRCKQTLGDYLTERNIMGIYDVDTRAITRRLREDGSLIGVLSTEKSKSDDELLE

Query:  MSRSWDIVGVDLISGVSCKSPYEWVDRTDLEWEFKSGGYSSETFH-------------------------------------------------------
        MSRSWDIVGVDLISGVSCKSPYEWVDRTD EWEFKSGGYSS+TFH                                                       
Subjt:  MSRSWDIVGVDLISGVSCKSPYEWVDRTDLEWEFKSGGYSSETFH-------------------------------------------------------

Query:  ----------------------------ALGGKTFKMKFGHHGGNHPVRNFRNDRVEISAQNHNYAVDPASLPEGVEVTHINLNDGSCAGLAFPKLKIMS
                                    ALGGKTFKMKFGHHGGNHPVRNFRN+RVEISAQNHNYA+DPASLPEGVEVTHINLNDGSCAGLAFPKLKIMS
Subjt:  ----------------------------ALGGKTFKMKFGHHGGNHPVRNFRNDRVEISAQNHNYAVDPASLPEGVEVTHINLNDGSCAGLAFPKLKIMS

Query:  LQYHPEASPGPHDSDSGSG
        LQYHPEASPGPHDSDS  G
Subjt:  LQYHPEASPGPHDSDSGSG

TrEMBL top hitse value%identityAlignment
A0A0A0KV57 Glutamine amidotransferase type-1 domain-containing protein5.2e-17776.85Show/hide
Query:  MAIRVMDLVSGASLNCFHFKNPKGYVKSRDFSIRCSVPLSSSHGAATIDLGERPWKVSDARLVLEDGSVWRAKSFGASGTQVGEVVFNTSLTGYQEILTD
        MAIRVMDLVSGASLNCFHFKNPKG VKSR FSIRCSVPLSSS GAATIDLGERPWKVSDARLVLEDGS+W+AKSFGASGTQVGEVVFNTSLTGYQEILTD
Subjt:  MAIRVMDLVSGASLNCFHFKNPKGYVKSRDFSIRCSVPLSSSHGAATIDLGERPWKVSDARLVLEDGSVWRAKSFGASGTQVGEVVFNTSLTGYQEILTD

Query:  PSYAGQFVLMTNPHIGNTGVNFDDEEARQCFLAGLVIRSLSFSTSNWRCKQTLGDYLTERNIMGIYDVDTRAITRRLREDGSLIGVLSTEKSKSDDELLE
        PSYAGQFVLMTNPHIGNTGVNFDDEEARQCFL GLVIRSLS STSNWRCKQTLGDYL ERNIMGIYDVDTRAITRRLREDGSLIGVLSTEKSKSDDELLE
Subjt:  PSYAGQFVLMTNPHIGNTGVNFDDEEARQCFLAGLVIRSLSFSTSNWRCKQTLGDYLTERNIMGIYDVDTRAITRRLREDGSLIGVLSTEKSKSDDELLE

Query:  MSRSWDIVGVDLISGVSCKSPYEWVDRTDLEWEFKSGGYSSETFH-------------------------------------------------------
        MSRSW+IVGVDLISGVSCKSP+EWVDRTDLEWEFKSGG+SSETFH                                                       
Subjt:  MSRSWDIVGVDLISGVSCKSPYEWVDRTDLEWEFKSGGYSSETFH-------------------------------------------------------

Query:  ----------------------------ALGGKTFKMKFGHHGGNHPVRNFRNDRVEISAQNHNYAVDPASLPEGVEVTHINLNDGSCAGLAFPKLKIMS
                                    ALGGKTFKMKFGHHGGNHPVRNFRNDRVEISAQNHNYAVDPASLPEGVEVTHINLNDGSCAGL+FPKLKIMS
Subjt:  ----------------------------ALGGKTFKMKFGHHGGNHPVRNFRNDRVEISAQNHNYAVDPASLPEGVEVTHINLNDGSCAGLAFPKLKIMS

Query:  LQYHPEASPGPHDSDSGSG
        LQYHPEASPGPHDSDS  G
Subjt:  LQYHPEASPGPHDSDSGSG

A0A1S3BDW8 carbamoyl-phosphate synthase small chain, chloroplastic1.2e-17877.8Show/hide
Query:  MAIRVMDLVSGASLNCFHFKNPKGYVKSRDFSIRCSVPLSSSHGAATIDLGERPWKVSDARLVLEDGSVWRAKSFGASGTQVGEVVFNTSLTGYQEILTD
        MAIRVMDLVSGASLNCFHFKNPKG VKSR FSIRCSVPLSSS GAATIDLGERPWKVSDARLVLEDGSVW+AKSFGASGTQVGEVVFNTSLTGYQEILTD
Subjt:  MAIRVMDLVSGASLNCFHFKNPKGYVKSRDFSIRCSVPLSSSHGAATIDLGERPWKVSDARLVLEDGSVWRAKSFGASGTQVGEVVFNTSLTGYQEILTD

Query:  PSYAGQFVLMTNPHIGNTGVNFDDEEARQCFLAGLVIRSLSFSTSNWRCKQTLGDYLTERNIMGIYDVDTRAITRRLREDGSLIGVLSTEKSKSDDELLE
        PSYAGQFVLMTNPHIGNTGVNFDDEEARQCFLAGLVIRSLS STSNWRCKQTLGDYL ERNIMGIYDVDTRAITRRLREDGSLIGVLSTEKSKSDDELLE
Subjt:  PSYAGQFVLMTNPHIGNTGVNFDDEEARQCFLAGLVIRSLSFSTSNWRCKQTLGDYLTERNIMGIYDVDTRAITRRLREDGSLIGVLSTEKSKSDDELLE

Query:  MSRSWDIVGVDLISGVSCKSPYEWVDRTDLEWEFKSGGYSSETFH-------------------------------------------------------
        MSRSW+IVGVDLISGVSCKSPYEWVDRTDLEWEFKSGG+SSETFH                                                       
Subjt:  MSRSWDIVGVDLISGVSCKSPYEWVDRTDLEWEFKSGGYSSETFH-------------------------------------------------------

Query:  ----------------------------ALGGKTFKMKFGHHGGNHPVRNFRNDRVEISAQNHNYAVDPASLPEGVEVTHINLNDGSCAGLAFPKLKIMS
                                    ALGGKTFKMKFGHHGGNHPVRNFRNDRVEISAQNHNYAVDPASLPEGVEVTHINLNDGSCAGLAFPKLKIMS
Subjt:  ----------------------------ALGGKTFKMKFGHHGGNHPVRNFRNDRVEISAQNHNYAVDPASLPEGVEVTHINLNDGSCAGLAFPKLKIMS

Query:  LQYHPEASPGPHDSDSGSG
        LQYHPEASPGPHDSDS  G
Subjt:  LQYHPEASPGPHDSDSGSG

A0A5D3CV98 Carbamoyl-phosphate synthase small chain1.2e-17878.12Show/hide
Query:  MAIRVMDLVSGASLNCFHFKNPKGYVKSRDFSIRCSVPLSSSHGAATIDLGERPWKVSDARLVLEDGSVWRAKSFGASGTQVGEVVFNTSLTGYQEILTD
        MAIRVMDLVSGASLNCFHFKNPKG VKSR FSIRCSVPLSSS GAATIDLGERPWKVSDARLVLEDGSVW+AKSFGASGTQVGEVVFNTSLTGYQEILTD
Subjt:  MAIRVMDLVSGASLNCFHFKNPKGYVKSRDFSIRCSVPLSSSHGAATIDLGERPWKVSDARLVLEDGSVWRAKSFGASGTQVGEVVFNTSLTGYQEILTD

Query:  PSYAGQFVLMTNPHIGNTGVNFDDEEARQCFLAGLVIRSLSFSTSNWRCKQTLGDYLTERNIMGIYDVDTRAITRRLREDGSLIGVLSTEKSKSDDELLE
        PSYAGQFVLMTNPHIGNTGVNFDDEEARQCFLAGLVIRSLS STSNWRCKQTLGDYL ERNIMGIYDVDTRAITRRLREDGSLIGVLSTEKSKSDDELLE
Subjt:  PSYAGQFVLMTNPHIGNTGVNFDDEEARQCFLAGLVIRSLSFSTSNWRCKQTLGDYLTERNIMGIYDVDTRAITRRLREDGSLIGVLSTEKSKSDDELLE

Query:  MSRSWDIVGVDLISGVSCKSPYEWVDRTDLEWEFKSGGYSSETFH-------------------------------------------------------
        MSRSW+IVGVDLISGVSCKSPYEWVDRTDLEWEFKSGG+SSETFH                                                       
Subjt:  MSRSWDIVGVDLISGVSCKSPYEWVDRTDLEWEFKSGGYSSETFH-------------------------------------------------------

Query:  ----------------------------ALGGKTFKMKFGHHGGNHPVRNFRNDRVEISAQNHNYAVDPASLPEGVEVTHINLNDGSCAGLAFPKLKIMS
                                    ALGGKTFKMKFGHHGGNHPVRNFRNDRVEISAQNHNYAVDPASLPEGVEVTHINLNDGSCAGLAFPKLKIMS
Subjt:  ----------------------------ALGGKTFKMKFGHHGGNHPVRNFRNDRVEISAQNHNYAVDPASLPEGVEVTHINLNDGSCAGLAFPKLKIMS

Query:  LQYHPEASPGPHDSDS
        LQYHPEASPGPHDSDS
Subjt:  LQYHPEASPGPHDSDS

A0A6J1H064 carbamoyl-phosphate synthase small chain, chloroplastic-like7.3e-17977.33Show/hide
Query:  MAIRVMDLVSGASLNCFHFKNPKGYVKSRDFSIRCSVPLSSSHGAATIDLGERPWKVSDARLVLEDGSVWRAKSFGASGTQVGEVVFNTSLTGYQEILTD
        MAIRVMDLVSG SLNCFHFKNPKG+ KSRDFSIRCSVPLSSSHGAATIDLGERPWKVSDARLVLEDGS+WRAKSFGASGTQVGEVVFNTSLTGYQEILTD
Subjt:  MAIRVMDLVSGASLNCFHFKNPKGYVKSRDFSIRCSVPLSSSHGAATIDLGERPWKVSDARLVLEDGSVWRAKSFGASGTQVGEVVFNTSLTGYQEILTD

Query:  PSYAGQFVLMTNPHIGNTGVNFDDEEARQCFLAGLVIRSLSFSTSNWRCKQTLGDYLTERNIMGIYDVDTRAITRRLREDGSLIGVLSTEKSKSDDELLE
        PSYAGQFVLMTNPHIGNTGVNFDDEEAR+CFLAGLVIRSLS STSNWRCKQTLGDYLTERNIMGIYDVDTRAITRRLREDGSLIGVLSTEKSKSDDELLE
Subjt:  PSYAGQFVLMTNPHIGNTGVNFDDEEARQCFLAGLVIRSLSFSTSNWRCKQTLGDYLTERNIMGIYDVDTRAITRRLREDGSLIGVLSTEKSKSDDELLE

Query:  MSRSWDIVGVDLISGVSCKSPYEWVDRTDLEWEFKSGGYSSETFH-------------------------------------------------------
        MSRSWDIVGVDLISGVSCKSPYEWV+RT LEWEFKSGG+SSETFH                                                       
Subjt:  MSRSWDIVGVDLISGVSCKSPYEWVDRTDLEWEFKSGGYSSETFH-------------------------------------------------------

Query:  ----------------------------ALGGKTFKMKFGHHGGNHPVRNFRNDRVEISAQNHNYAVDPASLPEGVEVTHINLNDGSCAGLAFPKLKIMS
                                    ALGGKTFKMKFGHHGGNHPVRNFR+DRVEISAQNHNYAVDPASLPEGVEVTHINLNDGSCAGLAFPKLKIMS
Subjt:  ----------------------------ALGGKTFKMKFGHHGGNHPVRNFRNDRVEISAQNHNYAVDPASLPEGVEVTHINLNDGSCAGLAFPKLKIMS

Query:  LQYHPEASPGPHDSDSGSG
        LQYHPEASPGPHDSDS  G
Subjt:  LQYHPEASPGPHDSDSGSG

A0A6J1JPA8 carbamoyl-phosphate synthase small chain, chloroplastic-like3.1e-17776.61Show/hide
Query:  MAIRVMDLVSGASLNCFHFKNPKGYVKSRDFSIRCSVPLSSSHGAATIDLGERPWKVSDARLVLEDGSVWRAKSFGASGTQVGEVVFNTSLTGYQEILTD
        MAIRVMDLVSGASLNCFHFKNPKG+  SRDFSIRCSVPLSSSHGAATIDLGERPWKVSDARLVLEDGS+W AKSFGASGTQVGEVVFNTSLTGYQEILTD
Subjt:  MAIRVMDLVSGASLNCFHFKNPKGYVKSRDFSIRCSVPLSSSHGAATIDLGERPWKVSDARLVLEDGSVWRAKSFGASGTQVGEVVFNTSLTGYQEILTD

Query:  PSYAGQFVLMTNPHIGNTGVNFDDEEARQCFLAGLVIRSLSFSTSNWRCKQTLGDYLTERNIMGIYDVDTRAITRRLREDGSLIGVLSTEKSKSDDELLE
        PSYAGQFVLMTNPHIGNTGVNFDDEEAR+CFLAGLVIRSLS STSNWRCKQTLGDYL ERNIMGIYDVDTRAITRRLREDGSLIGVLSTEKSKSDDELLE
Subjt:  PSYAGQFVLMTNPHIGNTGVNFDDEEARQCFLAGLVIRSLSFSTSNWRCKQTLGDYLTERNIMGIYDVDTRAITRRLREDGSLIGVLSTEKSKSDDELLE

Query:  MSRSWDIVGVDLISGVSCKSPYEWVDRTDLEWEFKSGGYSSETFH-------------------------------------------------------
        MSRSWDIVGVDLISGVSCKSPYEWVDRT LEWEFKSGG+SSETFH                                                       
Subjt:  MSRSWDIVGVDLISGVSCKSPYEWVDRTDLEWEFKSGGYSSETFH-------------------------------------------------------

Query:  ----------------------------ALGGKTFKMKFGHHGGNHPVRNFRNDRVEISAQNHNYAVDPASLPEGVEVTHINLNDGSCAGLAFPKLKIMS
                                    ALGGKTFKMKFGHHGGNHPVRNFR++RVEISAQNHNYAVDPASLPEG+EVTHINLNDGSCAGLAFPKLKIMS
Subjt:  ----------------------------ALGGKTFKMKFGHHGGNHPVRNFRNDRVEISAQNHNYAVDPASLPEGVEVTHINLNDGSCAGLAFPKLKIMS

Query:  LQYHPEASPGPHDSDSGSG
        LQYHPEASPGPHDSDS  G
Subjt:  LQYHPEASPGPHDSDSGSG

SwissProt top hitse value%identityAlignment
O66727 Carbamoyl-phosphate synthase small chain6.8e-6540.28Show/hide
Query:  ARLVLEDGSVWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTGVNFDDEEARQCFLAGLVIRSLSFSTSNWRCKQTLGDYLTE
        A L LEDGS +   SFGA G   GE+VFNTS+TGYQEILTDPSY GQ V+MT   IGN GVN +D E++   + G V++   F  SNWR K++L +YL E
Subjt:  ARLVLEDGSVWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTGVNFDDEEARQCFLAGLVIRSLSFSTSNWRCKQTLGDYLTE

Query:  RNIMGIYDVDTRAITRRLREDGSLIGVLSTEKSKSDDELLEMSRSW-DIVGVDLISGVSCKSPYEW----------------------------------
         N++GIY +DTRA+ +++RE GS+ GV+ST + K   +L++ +R   DI   +L+  VS K  Y W                                  
Subjt:  RNIMGIYDVDTRAITRRLREDGSLIGVLSTEKSKSDDELLEMSRSW-DIVGVDLISGVSCKSPYEW----------------------------------

Query:  --------------------VDRTDLEWEFKSGG------------YSSETFH----------------ALGGKTFKMKFGHHGGNHPVRNFRNDRVEIS
                            +++ + +  F S G             + E                   ALGGKT+K+KFGHHGGNHPV++ R  ++EI+
Subjt:  --------------------VDRTDLEWEFKSGG------------YSSETFH----------------ALGGKTFKMKFGHHGGNHPVRNFRNDRVEIS

Query:  AQNHNYAVDPASLPEGVEVTHINLNDGSCAGLAFPKLKIMSLQYHPEASPGPHDS
        AQNHN+A+DP SLPE VEVTH+NL D +  G+    L I ++QYHPE SPGPHDS
Subjt:  AQNHNYAVDPASLPEGVEVTHINLNDGSCAGLAFPKLKIMSLQYHPEASPGPHDS

Q5N0L0 Carbamoyl-phosphate synthase small chain5.9e-6138.2Show/hide
Query:  ARLVLEDGSVWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTGVNFDDEEARQCFLAGLVIRSLSFSTSNWRCKQTLGDYLTE
        A LVL DGSV+   + GA+GT +GEVVFNT +TGYQE+LTDPSY GQ V  T P +GNTGVN +DEE+ +  ++GL+ R+++   SNWR  ++L DYL +
Subjt:  ARLVLEDGSVWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTGVNFDDEEARQCFLAGLVIRSLSFSTSNWRCKQTLGDYLTE

Query:  RNIMGIYDVDTRAITRRLREDGSLIGVLSTEKSKSDDELLEMSRSWDIVGVDLISGVSCKSPYEWVDRTDLEWEF-------------------------
         NI+GIY +DTRA+T+ LR  G++ G +ST     ++   E+  +  + G++L+  V+   PYEW   T   WEF                         
Subjt:  RNIMGIYDVDTRAITRRLREDGSLIGVLSTEKSKSDDELLEMSRSWDIVGVDLISGVSCKSPYEWVDRTDLEWEF-------------------------

Query:  ----------------------------------------KSGGYSSETF------------------HALGGKTFKMKFGHHGGNHPVRNFRNDRVEIS
                                                K+G  +++                     ALG +TFK+KFGH G NHP     + +VEI+
Subjt:  ----------------------------------------KSGGYSSETF------------------HALGGKTFKMKFGHHGGNHPVRNFRNDRVEIS

Query:  AQNHNYAVDPASLPEGVEVTHINLNDGSCAGLAFPKLKIMSLQYHPEASPGPHDSD
         QNH +A+   SL   VEVTH+NLND + AGL    L + S+QYHPEASPGPHDSD
Subjt:  AQNHNYAVDPASLPEGVEVTHINLNDGSCAGLAFPKLKIMSLQYHPEASPGPHDSD

Q6YV23 Carbamoyl-phosphate synthase small chain, chloroplastic3.9e-12960.2Show/hide
Query:  RDFSIRCSVPLSSSHGAATIDLG-ERPWKVSDARLVLEDGSVWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTGVNFDDEEA
        R   +R +  +S       +D G +RPWK+SDARLVLEDGSVW+AKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTGVN DDEE+
Subjt:  RDFSIRCSVPLSSSHGAATIDLG-ERPWKVSDARLVLEDGSVWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTGVNFDDEEA

Query:  RQCFLAGLVIRSLSFSTSNWRCKQTLGDYLTERNIMGIYDVDTRAITRRLREDGSLIGVLSTEKSKSDDELLEMSRSWDIVGVDLISGVSCKSPYEWVDR
         +CFLAGL+IR+LS  TSNWRC +TL +YL +RNIMGIYDVDTRAITRRLREDGSLIGVLST++S++DDELLEM+++W IVGVDLISGV+C +PYEW D+
Subjt:  RQCFLAGLVIRSLSFSTSNWRCKQTLGDYLTERNIMGIYDVDTRAITRRLREDGSLIGVLSTEKSKSDDELLEMSRSWDIVGVDLISGVSCKSPYEWVDR

Query:  TDLEWEFKSGGYSSETFH----------------------------------------------------------------------------------
        TD EWEFK  G S+E+FH                                                                                  
Subjt:  TDLEWEFKSGGYSSETFH----------------------------------------------------------------------------------

Query:  -ALGGKTFKMKFGHHGGNHPVRNFRNDRVEISAQNHNYAVDPASLPEGVEVTHINLNDGSCAGLAFPKLKIMSLQYHPEASPGPHDSDSGSG
         ALGGKTFKMKFGHHGGNHPV + R+ RV+ISAQNHNYAVDP SLPEGV+VTHINLND SCAGL +PK+K++SLQYHPE+SPGPHDSD   G
Subjt:  -ALGGKTFKMKFGHHGGNHPVRNFRNDRVEISAQNHNYAVDPASLPEGVEVTHINLNDGSCAGLAFPKLKIMSLQYHPEASPGPHDSDSGSG

Q8YXQ7 Carbamoyl-phosphate synthase small chain7.5e-6438.61Show/hide
Query:  ARLVLEDGSVWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTGVNFDDEEARQCFLAGLVIRSLSFSTSNWRCKQTLGDYLTE
        A LVL DG+ +R  SFGA+GT +GEVVFNT +TGYQE+LTDPSY GQ V+ T P +GNTGVN +DEE+ +  + G + R++    SNWR  Q+L DYL +
Subjt:  ARLVLEDGSVWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTGVNFDDEEARQCFLAGLVIRSLSFSTSNWRCKQTLGDYLTE

Query:  RNIMGIYDVDTRAITRRLREDGSLIGVLSTEKSKSDDELLEMSRSWDIVGVDLISGVSCKSPYEWVDRTDLEWEFKSGG---------------------
         +I GI+ +DTRA+TR++R  G++ G +STE     + L ++  + ++ G++L+  V+  + YEW D T   WEF   G                     
Subjt:  RNIMGIYDVDTRAITRRLREDGSLIGVLSTEKSKSDDELLEMSRSWDIVGVDLISGVSCKSPYEWVDRTDLEWEFKSGG---------------------

Query:  -------------------------YSSETF----------------------------------------HALGGKTFKMKFGHHGGNHPVRNFRNDRV
                                 Y+ +                                          HALG +TFK+KFGH G N P       RV
Subjt:  -------------------------YSSETF----------------------------------------HALGGKTFKMKFGHHGGNHPVRNFRNDRV

Query:  EISAQNHNYAVDPASLPEG-VEVTHINLNDGSCAGLAFPKLKIMSLQYHPEASPGPHDSD
        EI++QNH++A+DP SLPE  VE++H+NLND + AGL    L I S+QYHPEASPGPHD+D
Subjt:  EISAQNHNYAVDPASLPEG-VEVTHINLNDGSCAGLAFPKLKIMSLQYHPEASPGPHDSD

Q9LVW7 Carbamoyl-phosphate synthase small chain, chloroplastic5.3e-12660.94Show/hide
Query:  IRCSVPLSSSHGAATIDLGERPWKVSDARLVLEDGSVWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTGVNFDDEEARQCFL
        IRCS   +S     T  + E+PW   +ARLVLEDGS+W AKSFGA GT++ E+VFNTSLTGYQEILTDPSYAGQFVLMTNP IGNTGVN DDEE+ QCFL
Subjt:  IRCSVPLSSSHGAATIDLGERPWKVSDARLVLEDGSVWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTGVNFDDEEARQCFL

Query:  AGLVIRSLSFSTSNWRCKQTLGDYLTERNIMGIYDVDTRAITRRLREDGSLIGVLSTEKSKSDDELLEMSRSWDIVGVDLISGVSCKSPYEWVDRTDLEW
         GLVIR+LS STSNWRC +TL DYLTER+IMG+YD+DTRAITRRLREDGSLIGVLSTE+SK+DDELL+MSRSWDIVG+DLIS VSCKSPYEWVD+T+ EW
Subjt:  AGLVIRSLSFSTSNWRCKQTLGDYLTERNIMGIYDVDTRAITRRLREDGSLIGVLSTEKSKSDDELLEMSRSWDIVGVDLISGVSCKSPYEWVDRTDLEW

Query:  EFKSGG---------------------------------------------------------------YSSETF--------------------HALGG
        +F +                                                                 Y+ ET                      ALGG
Subjt:  EFKSGG---------------------------------------------------------------YSSETF--------------------HALGG

Query:  KTFKMKFGHHGGNHPVRNFRNDRVEISAQNHNYAVDPASLPEGVEVTHINLNDGSCAGLAFPKLKIMSLQYHPEASPGPHDSDS
        KTFKMKFGHHGGNHPVRN R  +VEISAQNHNYAVDPASLP GVEVTH+NLNDGSCAGL+FP++ +MSLQYHPEASPGPHDSD+
Subjt:  KTFKMKFGHHGGNHPVRNFRNDRVEISAQNHNYAVDPASLPEGVEVTHINLNDGSCAGLAFPKLKIMSLQYHPEASPGPHDSDS

Arabidopsis top hitse value%identityAlignment
AT3G27740.1 carbamoyl phosphate synthetase A3.7e-12760.94Show/hide
Query:  IRCSVPLSSSHGAATIDLGERPWKVSDARLVLEDGSVWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTGVNFDDEEARQCFL
        IRCS   +S     T  + E+PW   +ARLVLEDGS+W AKSFGA GT++ E+VFNTSLTGYQEILTDPSYAGQFVLMTNP IGNTGVN DDEE+ QCFL
Subjt:  IRCSVPLSSSHGAATIDLGERPWKVSDARLVLEDGSVWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTGVNFDDEEARQCFL

Query:  AGLVIRSLSFSTSNWRCKQTLGDYLTERNIMGIYDVDTRAITRRLREDGSLIGVLSTEKSKSDDELLEMSRSWDIVGVDLISGVSCKSPYEWVDRTDLEW
         GLVIR+LS STSNWRC +TL DYLTER+IMG+YD+DTRAITRRLREDGSLIGVLSTE+SK+DDELL+MSRSWDIVG+DLIS VSCKSPYEWVD+T+ EW
Subjt:  AGLVIRSLSFSTSNWRCKQTLGDYLTERNIMGIYDVDTRAITRRLREDGSLIGVLSTEKSKSDDELLEMSRSWDIVGVDLISGVSCKSPYEWVDRTDLEW

Query:  EFKSGG---------------------------------------------------------------YSSETF--------------------HALGG
        +F +                                                                 Y+ ET                      ALGG
Subjt:  EFKSGG---------------------------------------------------------------YSSETF--------------------HALGG

Query:  KTFKMKFGHHGGNHPVRNFRNDRVEISAQNHNYAVDPASLPEGVEVTHINLNDGSCAGLAFPKLKIMSLQYHPEASPGPHDSDS
        KTFKMKFGHHGGNHPVRN R  +VEISAQNHNYAVDPASLP GVEVTH+NLNDGSCAGL+FP++ +MSLQYHPEASPGPHDSD+
Subjt:  KTFKMKFGHHGGNHPVRNFRNDRVEISAQNHNYAVDPASLPEGVEVTHINLNDGSCAGLAFPKLKIMSLQYHPEASPGPHDSDS

AT3G27740.2 carbamoyl phosphate synthetase A5.3e-8145.57Show/hide
Query:  IRCSVPLSSSHGAATIDLGERPWKVSDARLVLEDGSVWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTGVNFDDEEARQCFL
        IRCS   +S     T  + E+PW   +ARLVLEDGS+W AKSFGA GT++ E+VFNTSLTGYQEILTDPSYAGQFVLMTNP IGNTGVN           
Subjt:  IRCSVPLSSSHGAATIDLGERPWKVSDARLVLEDGSVWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTGVNFDDEEARQCFL

Query:  AGLVIRSLSFSTSNWRCKQTLGDYLTERNIMGIYDVDTRAITRRLREDGSLIGVLSTEKSKSDDELLEMSRSWDIVGVDLISGVSCKSPYEWVDRTDLEW
                                                                      DDELL+MSRSWDIVG+DLIS VSCKSPYEWVD+T+ EW
Subjt:  AGLVIRSLSFSTSNWRCKQTLGDYLTERNIMGIYDVDTRAITRRLREDGSLIGVLSTEKSKSDDELLEMSRSWDIVGVDLISGVSCKSPYEWVDRTDLEW

Query:  EFKSGG---------------------------------------------------------------YSSETF--------------------HALGG
        +F +                                                                 Y+ ET                      ALGG
Subjt:  EFKSGG---------------------------------------------------------------YSSETF--------------------HALGG

Query:  KTFKMKFGHHGGNHPVRNFRNDRVEISAQNHNYAVDPASLPEGVEVTHINLNDGSCAGLAFPKLKIMSLQYHPEASPGPHDSDS
        KTFKMKFGHHGGNHPVRN R  +VEISAQNHNYAVDPASLP GVEVTH+NLNDGSCAGL+FP++ +MSLQYHPEASPGPHDSD+
Subjt:  KTFKMKFGHHGGNHPVRNFRNDRVEISAQNHNYAVDPASLPEGVEVTHINLNDGSCAGLAFPKLKIMSLQYHPEASPGPHDSDS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGATCAGGGTTATGGATTTGGTTTCCGGAGCTTCGCTGAATTGTTTTCATTTCAAAAACCCCAAAGGATATGTGAAATCTAGAGATTTCTCTATCAGATGCTCTGT
TCCTCTTTCCTCATCCCATGGTGCTGCCACGATTGATTTGGGAGAGAGGCCATGGAAGGTGTCGGATGCTCGGCTGGTGCTTGAAGATGGTTCAGTCTGGAGGGCCAAAT
CTTTTGGCGCTTCTGGAACCCAAGTTGGTGAAGTGGTTTTCAATACTTCTTTGACTGGGTATCAAGAAATTCTAACAGATCCCAGCTATGCTGGCCAGTTTGTGCTGATG
ACAAATCCCCATATTGGCAATACTGGTGTCAATTTCGATGATGAAGAAGCTAGGCAATGCTTTCTCGCCGGCCTGGTGATCAGAAGCCTAAGCTTCAGCACTTCAAATTG
GAGGTGTAAACAGACGCTTGGTGATTATTTAACAGAGAGAAACATCATGGGAATTTATGATGTTGATACTCGTGCTATTACTCGCCGGTTAAGGGAAGATGGAAGTCTTA
TTGGTGTTTTAAGCACTGAAAAATCAAAATCTGATGATGAGCTATTGGAAATGTCTCGGTCATGGGACATTGTTGGTGTTGACTTAATTAGTGGTGTTTCATGCAAATCG
CCTTATGAATGGGTGGATAGAACAGATTTGGAATGGGAGTTCAAATCTGGAGGGTACAGTTCAGAAACCTTTCATGCCTTGGGTGGTAAGACCTTCAAAATGAAATTTGG
TCATCATGGAGGCAATCATCCTGTTCGCAACTTCCGGAATGACCGTGTAGAAATTAGTGCGCAGAATCACAACTACGCCGTCGACCCTGCATCCCTTCCCGAAGGTGTTG
AAGTGACCCACATCAATCTAAATGATGGAAGTTGTGCTGGCCTTGCTTTCCCTAAGCTAAAGATTATGTCTCTTCAATACCATCCAGAAGCTTCCCCCGGACCTCATGAT
TCTGACTCCGGGTCAGGCGGGTTGCCTAGTGAGATTAGTCTAGATGTGCGTAGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGATCAGGGTTATGGATTTGGTTTCCGGAGCTTCGCTGAATTGTTTTCATTTCAAAAACCCCAAAGGATATGTGAAATCTAGAGATTTCTCTATCAGATGCTCTGT
TCCTCTTTCCTCATCCCATGGTGCTGCCACGATTGATTTGGGAGAGAGGCCATGGAAGGTGTCGGATGCTCGGCTGGTGCTTGAAGATGGTTCAGTCTGGAGGGCCAAAT
CTTTTGGCGCTTCTGGAACCCAAGTTGGTGAAGTGGTTTTCAATACTTCTTTGACTGGGTATCAAGAAATTCTAACAGATCCCAGCTATGCTGGCCAGTTTGTGCTGATG
ACAAATCCCCATATTGGCAATACTGGTGTCAATTTCGATGATGAAGAAGCTAGGCAATGCTTTCTCGCCGGCCTGGTGATCAGAAGCCTAAGCTTCAGCACTTCAAATTG
GAGGTGTAAACAGACGCTTGGTGATTATTTAACAGAGAGAAACATCATGGGAATTTATGATGTTGATACTCGTGCTATTACTCGCCGGTTAAGGGAAGATGGAAGTCTTA
TTGGTGTTTTAAGCACTGAAAAATCAAAATCTGATGATGAGCTATTGGAAATGTCTCGGTCATGGGACATTGTTGGTGTTGACTTAATTAGTGGTGTTTCATGCAAATCG
CCTTATGAATGGGTGGATAGAACAGATTTGGAATGGGAGTTCAAATCTGGAGGGTACAGTTCAGAAACCTTTCATGCCTTGGGTGGTAAGACCTTCAAAATGAAATTTGG
TCATCATGGAGGCAATCATCCTGTTCGCAACTTCCGGAATGACCGTGTAGAAATTAGTGCGCAGAATCACAACTACGCCGTCGACCCTGCATCCCTTCCCGAAGGTGTTG
AAGTGACCCACATCAATCTAAATGATGGAAGTTGTGCTGGCCTTGCTTTCCCTAAGCTAAAGATTATGTCTCTTCAATACCATCCAGAAGCTTCCCCCGGACCTCATGAT
TCTGACTCCGGGTCAGGCGGGTTGCCTAGTGAGATTAGTCTAGATGTGCGTAGCTGA
Protein sequenceShow/hide protein sequence
MAIRVMDLVSGASLNCFHFKNPKGYVKSRDFSIRCSVPLSSSHGAATIDLGERPWKVSDARLVLEDGSVWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLM
TNPHIGNTGVNFDDEEARQCFLAGLVIRSLSFSTSNWRCKQTLGDYLTERNIMGIYDVDTRAITRRLREDGSLIGVLSTEKSKSDDELLEMSRSWDIVGVDLISGVSCKS
PYEWVDRTDLEWEFKSGGYSSETFHALGGKTFKMKFGHHGGNHPVRNFRNDRVEISAQNHNYAVDPASLPEGVEVTHINLNDGSCAGLAFPKLKIMSLQYHPEASPGPHD
SDSGSGGLPSEISLDVRS