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HG10015063 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10015063
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionRNase H domain-containing protein
Genome locationChr02:23545107..23545373
RNA-Seq ExpressionHG10015063
SyntenyHG10015063
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
No hits found
TrEMBL top hitse value%identityAlignment
A0A1J3C7A8 Putative ribonuclease H protein (Fragment)2.3e-0444.83Show/hide
Query:  KRTLNPCLSINNNWKPPIIGFRKLNVNATWSESAHRSGTGWIIRDKKGNRVVGGGVAT
        K +  P  S  N WKPP  G+ K NV+ TWSE   RSG GW++RD +G  +  G   T
Subjt:  KRTLNPCLSINNNWKPPIIGFRKLNVNATWSESAHRSGTGWIIRDKKGNRVVGGGVAT
A0A1J3ELU2 RNase H domain-containing protein3.9e-0433.77Show/hide
Query:  MKVVEKDLEIYEDKR--IGFLPKRTLNPCLSINNNWKPPIIGFRKLNVNATWSESAHRSGTGWIIRDKKGNRVVGGG
        +K   +D+E ++ ++   G L  +   P   +  +WKPP  G+ K NV+ TW++ A  +G GW++RD KG+ +  GG
Subjt:  MKVVEKDLEIYEDKR--IGFLPKRTLNPCLSINNNWKPPIIGFRKLNVNATWSESAHRSGTGWIIRDKKGNRVVGGG
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G29090.1 Ribonuclease H-like superfamily protein4.6e-0531.94Show/hide
Query:  MKVVEKDLEIY----EDKRIGFLPKRTLNPCLSINNNWKPPIIGFRKLNVNATWSESAHRSGTGWIIRDKKG
        ++  E DLE +    E +  G  P+   + C      W+PP   + K N +ATW+    R G GW++R++KG
Subjt:  MKVVEKDLEIY----EDKRIGFLPKRTLNPCLSINNNWKPPIIGFRKLNVNATWSESAHRSGTGWIIRDKKG

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAGTAGTTGAGAAAGATTTGGAGATTTACGAGGATAAAAGGATTGGGTTCCTTCCTAAGCGAACTCTGAATCCCTGCCTATCAATCAACAACAATTGGAAGCCACC
GATCATAGGGTTTAGGAAACTCAACGTCAACGCTACCTGGTCAGAGTCTGCCCATCGCAGTGGTACGGGTTGGATTATTCGTGATAAGAAAGGCAATCGGGTCGTTGGAG
GGGGGGTTGCAACTTCGTATCATCCAACTGGCCAGTGGAAGTTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGAAAGTAGTTGAGAAAGATTTGGAGATTTACGAGGATAAAAGGATTGGGTTCCTTCCTAAGCGAACTCTGAATCCCTGCCTATCAATCAACAACAATTGGAAGCCACC
GATCATAGGGTTTAGGAAACTCAACGTCAACGCTACCTGGTCAGAGTCTGCCCATCGCAGTGGTACGGGTTGGATTATTCGTGATAAGAAAGGCAATCGGGTCGTTGGAG
GGGGGGTTGCAACTTCGTATCATCCAACTGGCCAGTGGAAGTTTTAG
Protein sequenceShow/hide protein sequence
MKVVEKDLEIYEDKRIGFLPKRTLNPCLSINNNWKPPIIGFRKLNVNATWSESAHRSGTGWIIRDKKGNRVVGGGVATSYHPTGQWKF