; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10015114 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10015114
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description60S ribosomal protein L17
Genome locationChr02:24002797..24006235
RNA-Seq ExpressionHG10015114
SyntenyHG10015114
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0015934 - large ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR001063 - Ribosomal protein L22/L17
IPR005721 - Ribosomal protein L22/L17, eukaryotic/archaeal
IPR018260 - Ribosomal protein L22/L17, conserved site
IPR036394 - Ribosomal protein L22/L17 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7012735.1 60S ribosomal protein L17-1, partial [Cucurbita argyrosperma subsp. argyrosperma]6.5e-6587.58Show/hide
Query:  NTRETAHALRKLPLAKAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDSLIVSHIQVNQAQKQR
        NTRETAHALRKLPLAKAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDSLIVSHIQVNQAQKQR
Subjt:  NTRETAHALRKLPLAKAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDSLIVSHIQVNQAQKQR

Query:  RRTYRAHGRINRMIPKFSNINLTVSAYMSSPCHIELILSEKEEPVKKEVNSGL
        RRTYRAHGRIN               YMSSPCHIELILSEKEEPVKKE  + L
Subjt:  RRTYRAHGRINRMIPKFSNINLTVSAYMSSPCHIELILSEKEEPVKKEVNSGL

XP_008446047.1 PREDICTED: 60S ribosomal protein L17-2 [Cucumis melo]5.0e-6587.01Show/hide
Query:  ENTRETAHALRKLPLAKAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDSLIVSHIQVNQAQKQ
        +NTRETAHALRKLPLAKAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDSLIVSHIQVNQAQKQ
Subjt:  ENTRETAHALRKLPLAKAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDSLIVSHIQVNQAQKQ

Query:  RRRTYRAHGRINRMIPKFSNINLTVSAYMSSPCHIELILSEKEEPVKKEVNSGL
        RRRTYRAHGRIN               YMSSPCHIELILSEKEEPVKKE  + L
Subjt:  RRRTYRAHGRINRMIPKFSNINLTVSAYMSSPCHIELILSEKEEPVKKEVNSGL

XP_022151946.1 60S ribosomal protein L17-2 [Momordica charantia]6.5e-6586.36Show/hide
Query:  ENTRETAHALRKLPLAKAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDSLIVSHIQVNQAQKQ
        +NTRETAHALRKLPLAKAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDSLI+SHIQVNQAQKQ
Subjt:  ENTRETAHALRKLPLAKAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDSLIVSHIQVNQAQKQ

Query:  RRRTYRAHGRINRMIPKFSNINLTVSAYMSSPCHIELILSEKEEPVKKEVNSGL
        RRRTYRAHGRIN               YMSSPCHIELILSEKEEPVKKE  + L
Subjt:  RRRTYRAHGRINRMIPKFSNINLTVSAYMSSPCHIELILSEKEEPVKKEVNSGL

XP_022945920.1 60S ribosomal protein L17-2 [Cucurbita moschata]5.0e-6587.01Show/hide
Query:  ENTRETAHALRKLPLAKAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDSLIVSHIQVNQAQKQ
        +NTRETAHALRKLPLAKAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDSLIVSHIQVNQAQKQ
Subjt:  ENTRETAHALRKLPLAKAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDSLIVSHIQVNQAQKQ

Query:  RRRTYRAHGRINRMIPKFSNINLTVSAYMSSPCHIELILSEKEEPVKKEVNSGL
        RRRTYRAHGRIN               YMSSPCHIELILSEKEEPVKKE  + L
Subjt:  RRRTYRAHGRINRMIPKFSNINLTVSAYMSSPCHIELILSEKEEPVKKEVNSGL

XP_038891549.1 60S ribosomal protein L17-2 [Benincasa hispida]1.1e-6489.26Show/hide
Query:  ENTRETAHALRKLPLAKAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDSLIVSHIQVNQAQKQ
        +NTRETAHALRKLPLAKAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDSLIVSHIQVNQAQKQ
Subjt:  ENTRETAHALRKLPLAKAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDSLIVSHIQVNQAQKQ

Query:  RRRTYRAHGRINRMIPKFSNINLTVSAYMSSPCHIELILSEKEEPVKKE
        RRRTYRAHGRIN               YMSSPCHIELILSEKEEPVKKE
Subjt:  RRRTYRAHGRINRMIPKFSNINLTVSAYMSSPCHIELILSEKEEPVKKE

TrEMBL top hitse value%identityAlignment
A0A0A0KPZ4 Uncharacterized protein2.4e-6587.01Show/hide
Query:  ENTRETAHALRKLPLAKAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDSLIVSHIQVNQAQKQ
        +NTRETAHALRKLPLAKAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDSLIVSHIQVNQAQKQ
Subjt:  ENTRETAHALRKLPLAKAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDSLIVSHIQVNQAQKQ

Query:  RRRTYRAHGRINRMIPKFSNINLTVSAYMSSPCHIELILSEKEEPVKKEVNSGL
        RRRTYRAHGRIN               YMSSPCHIELILSEKEEPVKKE  + L
Subjt:  RRRTYRAHGRINRMIPKFSNINLTVSAYMSSPCHIELILSEKEEPVKKEVNSGL

A0A1S3BDN4 60S ribosomal protein L17-22.4e-6587.01Show/hide
Query:  ENTRETAHALRKLPLAKAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDSLIVSHIQVNQAQKQ
        +NTRETAHALRKLPLAKAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDSLIVSHIQVNQAQKQ
Subjt:  ENTRETAHALRKLPLAKAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDSLIVSHIQVNQAQKQ

Query:  RRRTYRAHGRINRMIPKFSNINLTVSAYMSSPCHIELILSEKEEPVKKEVNSGL
        RRRTYRAHGRIN               YMSSPCHIELILSEKEEPVKKE  + L
Subjt:  RRRTYRAHGRINRMIPKFSNINLTVSAYMSSPCHIELILSEKEEPVKKEVNSGL

A0A5A7STA3 60S ribosomal protein L17-22.4e-6587.01Show/hide
Query:  ENTRETAHALRKLPLAKAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDSLIVSHIQVNQAQKQ
        +NTRETAHALRKLPLAKAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDSLIVSHIQVNQAQKQ
Subjt:  ENTRETAHALRKLPLAKAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDSLIVSHIQVNQAQKQ

Query:  RRRTYRAHGRINRMIPKFSNINLTVSAYMSSPCHIELILSEKEEPVKKEVNSGL
        RRRTYRAHGRIN               YMSSPCHIELILSEKEEPVKKE  + L
Subjt:  RRRTYRAHGRINRMIPKFSNINLTVSAYMSSPCHIELILSEKEEPVKKEVNSGL

A0A6J1G2C7 60S ribosomal protein L17-22.4e-6587.01Show/hide
Query:  ENTRETAHALRKLPLAKAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDSLIVSHIQVNQAQKQ
        +NTRETAHALRKLPLAKAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDSLIVSHIQVNQAQKQ
Subjt:  ENTRETAHALRKLPLAKAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDSLIVSHIQVNQAQKQ

Query:  RRRTYRAHGRINRMIPKFSNINLTVSAYMSSPCHIELILSEKEEPVKKEVNSGL
        RRRTYRAHGRIN               YMSSPCHIELILSEKEEPVKKE  + L
Subjt:  RRRTYRAHGRINRMIPKFSNINLTVSAYMSSPCHIELILSEKEEPVKKEVNSGL

A0A6J1HQT9 60S ribosomal protein L17-2-like2.4e-6587.01Show/hide
Query:  ENTRETAHALRKLPLAKAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDSLIVSHIQVNQAQKQ
        +NTRETAHALRKLPLAKAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDSLIVSHIQVNQAQKQ
Subjt:  ENTRETAHALRKLPLAKAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDSLIVSHIQVNQAQKQ

Query:  RRRTYRAHGRINRMIPKFSNINLTVSAYMSSPCHIELILSEKEEPVKKEVNSGL
        RRRTYRAHGRIN               YMSSPCHIELILSEKEEPVKKE  + L
Subjt:  RRRTYRAHGRINRMIPKFSNINLTVSAYMSSPCHIELILSEKEEPVKKEVNSGL

SwissProt top hitse value%identityAlignment
O48557 60S ribosomal protein L171.3e-6381.58Show/hide
Query:  ENTRETAHALRKLPLAKAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDSLIVSHIQVNQAQKQ
        +NTRETA ALRKLPL KAKRYLEDV+AHKQAIPFRR+CGGVGRTAQAK+RHSNGQGRWPVKSA+FILDLLKNAESNA+VKGLDVD+L VSHIQVNQAQKQ
Subjt:  ENTRETAHALRKLPLAKAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDSLIVSHIQVNQAQKQ

Query:  RRRTYRAHGRINRMIPKFSNINLTVSAYMSSPCHIELILSEKEEPVKKEVNS
        RRRTYRAHGRIN               YMSSPCHIELILSEKEEPVKKE ++
Subjt:  RRRTYRAHGRINRMIPKFSNINLTVSAYMSSPCHIELILSEKEEPVKKEVNS

P35266 60S ribosomal protein L17-15.9e-6178.95Show/hide
Query:  ENTRETAHALRKLPLAKAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDSLIVSHIQVNQAQKQ
        +NTRETA ALRK+PL KAKRYLEDVLAHKQAIPFRR+C GVGRTAQ KNR  NGQGRWP KSAKF+LDLLKNAESNAEVKGLDVD+L +SHIQVNQAQKQ
Subjt:  ENTRETAHALRKLPLAKAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDSLIVSHIQVNQAQKQ

Query:  RRRTYRAHGRINRMIPKFSNINLTVSAYMSSPCHIELILSEKEEPVKKEVNS
        RRRTYRAHGRIN               YMS+PCHIELILSEKEEPVKKE  S
Subjt:  RRRTYRAHGRINRMIPKFSNINLTVSAYMSSPCHIELILSEKEEPVKKEVNS

P35267 60S ribosomal protein L17-23.8e-6076.97Show/hide
Query:  ENTRETAHALRKLPLAKAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDSLIVSHIQVNQAQKQ
        +NTRETA ALR++PL KAKRYLEDVLAHKQAIPFRR+C GVGRTAQ KNR  NGQGRWP KSA+F+LDLLKNAESNAEVKGLDVD+L +SHIQVNQAQKQ
Subjt:  ENTRETAHALRKLPLAKAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDSLIVSHIQVNQAQKQ

Query:  RRRTYRAHGRINRMIPKFSNINLTVSAYMSSPCHIELILSEKEEPVKKEVNS
        RRRTYRAHGRIN               YMS+PCHIELILSEKEEPVKKE ++
Subjt:  RRRTYRAHGRINRMIPKFSNINLTVSAYMSSPCHIELILSEKEEPVKKEVNS

P51413 60S ribosomal protein L17-23.1e-6278.57Show/hide
Query:  ENTRETAHALRKLPLAKAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDSLIVSHIQVNQAQKQ
        +NTRETAHA+RKLPL KAKRYLEDV+AHKQAIPF RFC GVGRTAQAKNRHSNGQGRWP KSA+F+LDLLKNAESNAEVKGLDVD+L +SHIQVNQA KQ
Subjt:  ENTRETAHALRKLPLAKAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDSLIVSHIQVNQAQKQ

Query:  RRRTYRAHGRINRMIPKFSNINLTVSAYMSSPCHIELILSEKEEPVKKEVNSGL
        RRRTYRAHGRIN               YMS+PCHIELILSEKEEPVKKE  + L
Subjt:  RRRTYRAHGRINRMIPKFSNINLTVSAYMSSPCHIELILSEKEEPVKKEVNSGL

Q93VI3 60S ribosomal protein L17-14.1e-6278.57Show/hide
Query:  ENTRETAHALRKLPLAKAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDSLIVSHIQVNQAQKQ
        +NTRETAHA+RKLPL KAKRYLEDV+AHKQAIPF RFC GVGRTAQAKNRHSNGQGRWP KSA+F+LDLLKNAESNAEVKGLDVD+L +SHIQVNQA KQ
Subjt:  ENTRETAHALRKLPLAKAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDSLIVSHIQVNQAQKQ

Query:  RRRTYRAHGRINRMIPKFSNINLTVSAYMSSPCHIELILSEKEEPVKKEVNSGL
        RRRTYRAHGRIN               YMS+PCHIELILSEKEEPVKKE  + L
Subjt:  RRRTYRAHGRINRMIPKFSNINLTVSAYMSSPCHIELILSEKEEPVKKEVNSGL

Arabidopsis top hitse value%identityAlignment
AT1G27400.1 Ribosomal protein L22p/L17e family protein2.9e-6378.57Show/hide
Query:  ENTRETAHALRKLPLAKAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDSLIVSHIQVNQAQKQ
        +NTRETAHA+RKLPL KAKRYLEDV+AHKQAIPF RFC GVGRTAQAKNRHSNGQGRWP KSA+F+LDLLKNAESNAEVKGLDVD+L +SHIQVNQA KQ
Subjt:  ENTRETAHALRKLPLAKAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDSLIVSHIQVNQAQKQ

Query:  RRRTYRAHGRINRMIPKFSNINLTVSAYMSSPCHIELILSEKEEPVKKEVNSGL
        RRRTYRAHGRIN               YMS+PCHIELILSEKEEPVKKE  + L
Subjt:  RRRTYRAHGRINRMIPKFSNINLTVSAYMSSPCHIELILSEKEEPVKKEVNSGL

AT1G67430.1 Ribosomal protein L22p/L17e family protein2.2e-6378.57Show/hide
Query:  ENTRETAHALRKLPLAKAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDSLIVSHIQVNQAQKQ
        +NTRETAHA+RKLPL KAKRYLEDV+AHKQAIPF RFC GVGRTAQAKNRHSNGQGRWP KSA+F+LDLLKNAESNAEVKGLDVD+L +SHIQVNQA KQ
Subjt:  ENTRETAHALRKLPLAKAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDSLIVSHIQVNQAQKQ

Query:  RRRTYRAHGRINRMIPKFSNINLTVSAYMSSPCHIELILSEKEEPVKKEVNSGL
        RRRTYRAHGRIN               YMS+PCHIELILSEKEEPVKKE  + L
Subjt:  RRRTYRAHGRINRMIPKFSNINLTVSAYMSSPCHIELILSEKEEPVKKEVNSGL

AT1G67430.2 Ribosomal protein L22p/L17e family protein1.5e-3587.34Show/hide
Query:  ENTRETAHALRKLPLAKAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEV
        +NTRETAHA+RKLPL KAKRYLEDV+AHKQAIPF RFC GVGRTAQAKNRHSNGQGRWP KSA+F+LDLLKNAESNAE+
Subjt:  ENTRETAHALRKLPLAKAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTAGAAAATACACGAGAGACTGCTCATGCCCTCAGAAAGTTGCCCTTGGCCAAGGCAAAAAGATACTTGGAGGATGTTCTCGCCCACAAGCAGGCTATTCCA
TTCCGACGTTTCTGTGGAGGTGTTGGTCGAACTGCCCAGGCAAAAAATAGGCATTCAAATGGACAAGGACGCTGGCCTGTTAAATCTGCCAAATTTATTCTAGAT
CTTCTTAAGAATGCTGAGAGTAACGCTGAAGTGAAAGGACTAGACGTTGATTCTCTCATCGTATCCCACATTCAAGTGAACCAAGCTCAAAAGCAAAGGCGTCGT
ACATACCGTGCTCATGGAAGAATTAACCGTATGATTCCTAAGTTCTCAAATATAAATCTTACCGTTTCAGCCTATATGTCATCTCCATGCCACATCGAGCTTATT
TTGTCAGAAAAGGAAGAACCTGTCAAGAAAGAGGTAAATTCTGGACTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGTTAGAAAATACACGAGAGACTGCTCATGCCCTCAGAAAGTTGCCCTTGGCCAAGGCAAAAAGATACTTGGAGGATGTTCTCGCCCACAAGCAGGCTATTCCA
TTCCGACGTTTCTGTGGAGGTGTTGGTCGAACTGCCCAGGCAAAAAATAGGCATTCAAATGGACAAGGACGCTGGCCTGTTAAATCTGCCAAATTTATTCTAGAT
CTTCTTAAGAATGCTGAGAGTAACGCTGAAGTGAAAGGACTAGACGTTGATTCTCTCATCGTATCCCACATTCAAGTGAACCAAGCTCAAAAGCAAAGGCGTCGT
ACATACCGTGCTCATGGAAGAATTAACCGTATGATTCCTAAGTTCTCAAATATAAATCTTACCGTTTCAGCCTATATGTCATCTCCATGCCACATCGAGCTTATT
TTGTCAGAAAAGGAAGAACCTGTCAAGAAAGAGGTAAATTCTGGACTCTAG
Protein sequenceShow/hide protein sequence
MLENTRETAHALRKLPLAKAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDSLIVSHIQVNQAQKQRRR
TYRAHGRINRMIPKFSNINLTVSAYMSSPCHIELILSEKEEPVKKEVNSGL