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HG10015120 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10015120
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionProteasome subunit beta
Genome locationChr02:24066220..24066585
RNA-Seq ExpressionHG10015120
SyntenyHG10015120
Gene Ontology termsGO:0010498 - proteasomal protein catabolic process (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:0019774 - proteasome core complex, beta-subunit complex (cellular component)
GO:0004298 - threonine-type endopeptidase activity (molecular function)
InterPro domainsIPR029055 - Nucleophile aminohydrolases, N-terminal


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF8408408.1 hypothetical protein HHK36_007560 [Tetracentron sinense]3.7e-2584.06Show/hide
Query:  YRYNLSVEEVAELARRTIYHATFQDGASVYYVGPNGWKKLSGDDVGELHYKYYLVVSDTDEQEMVEVVG
        Y+Y++SVEE AELARR+IYHATF+DGASVYYVGPNGWKKLSGDDVGELHYKYY VV  T EQEMVEV G
Subjt:  YRYNLSVEEVAELARRTIYHATFQDGASVYYVGPNGWKKLSGDDVGELHYKYYLVVSDTDEQEMVEVVG

KAG6573651.1 hypothetical protein SDJN03_27538, partial [Cucurbita argyrosperma subsp. sororia]5.3e-2478.38Show/hide
Query:  YRYNLSVEEVAELARRTIYHATFQDG-----ASVYYVGPNGWKKLSGDDVGELHYKYYLVVSDTDEQEMVEVVG
        YRY+LS+EE AELARR IYHATF+DG     ASVYYVGPNGWKKLSGDDVGELH+KYY VV+DT EQEMVE+ G
Subjt:  YRYNLSVEEVAELARRTIYHATFQDG-----ASVYYVGPNGWKKLSGDDVGELHYKYYLVVSDTDEQEMVEVVG

KAG7012739.1 hypothetical protein SDJN02_25492 [Cucurbita argyrosperma subsp. argyrosperma]5.3e-2478.38Show/hide
Query:  YRYNLSVEEVAELARRTIYHATFQDG-----ASVYYVGPNGWKKLSGDDVGELHYKYYLVVSDTDEQEMVEVVG
        YRY+LS+EE AELARR IYHATF+DG     ASVYYVGPNGWKKLSGDDVGELH+KYY VV+DT EQEMVE+ G
Subjt:  YRYNLSVEEVAELARRTIYHATFQDG-----ASVYYVGPNGWKKLSGDDVGELHYKYYLVVSDTDEQEMVEVVG

XP_016900325.1 PREDICTED: proteasome subunit beta type-5-like isoform X3 [Cucumis melo]2.6e-3178.26Show/hide
Query:  MSNFNLDLRHSDFQRICIYRYNLSVEEVAELARRTIYHATFQDG-----ASVYYVGPNGWKKLSGDDVGELHYKYYLVVSDTDEQEMVEVVG
        M NFNLDLR+SDFQ +C Y+Y+LSVEE AELARR IYHATF+DG     ASVY+VGPNGWKKLSGDDVGELHYKYY VV DT EQEMVEV G
Subjt:  MSNFNLDLRHSDFQRICIYRYNLSVEEVAELARRTIYHATFQDG-----ASVYYVGPNGWKKLSGDDVGELHYKYYLVVSDTDEQEMVEVVG

XP_022944784.1 proteasome subunit beta type-5-like [Cucurbita moschata]5.3e-2478.38Show/hide
Query:  YRYNLSVEEVAELARRTIYHATFQDG-----ASVYYVGPNGWKKLSGDDVGELHYKYYLVVSDTDEQEMVEVVG
        YRY+LS+EE AELARR IYHATF+DG     ASVYYVGPNGWKKLSGDDVGELH+KYY VV+DT EQEMVE+ G
Subjt:  YRYNLSVEEVAELARRTIYHATFQDG-----ASVYYVGPNGWKKLSGDDVGELHYKYYLVVSDTDEQEMVEVVG

TrEMBL top hitse value%identityAlignment
A0A1S4DX77 proteasome subunit beta type-5-like isoform X31.3e-3178.26Show/hide
Query:  MSNFNLDLRHSDFQRICIYRYNLSVEEVAELARRTIYHATFQDG-----ASVYYVGPNGWKKLSGDDVGELHYKYYLVVSDTDEQEMVEVVG
        M NFNLDLR+SDFQ +C Y+Y+LSVEE AELARR IYHATF+DG     ASVY+VGPNGWKKLSGDDVGELHYKYY VV DT EQEMVEV G
Subjt:  MSNFNLDLRHSDFQRICIYRYNLSVEEVAELARRTIYHATFQDG-----ASVYYVGPNGWKKLSGDDVGELHYKYYLVVSDTDEQEMVEVVG

A0A438DIS1 Proteasome subunit beta1.3e-2378.38Show/hide
Query:  YRYNLSVEEVAELARRTIYHATFQDG-----ASVYYVGPNGWKKLSGDDVGELHYKYYLVVSDTDEQEMVEVVG
        YRY++SVEE AELARR+IYHATF+DG     ASVYYVGPNGWKKLSGDDVGELHYKYY V+  T EQEMVEV G
Subjt:  YRYNLSVEEVAELARRTIYHATFQDG-----ASVYYVGPNGWKKLSGDDVGELHYKYYLVVSDTDEQEMVEVVG

A0A6J1FZ24 Proteasome subunit beta2.6e-2478.38Show/hide
Query:  YRYNLSVEEVAELARRTIYHATFQDG-----ASVYYVGPNGWKKLSGDDVGELHYKYYLVVSDTDEQEMVEVVG
        YRY+LS+EE AELARR IYHATF+DG     ASVYYVGPNGWKKLSGDDVGELH+KYY VV+DT EQEMVE+ G
Subjt:  YRYNLSVEEVAELARRTIYHATFQDG-----ASVYYVGPNGWKKLSGDDVGELHYKYYLVVSDTDEQEMVEVVG

A0A6J1HPI4 Proteasome endopeptidase complex4.4e-2477.03Show/hide
Query:  YRYNLSVEEVAELARRTIYHATFQDG-----ASVYYVGPNGWKKLSGDDVGELHYKYYLVVSDTDEQEMVEVVG
        YRY++S+EE AELARR IYHATF+DG     ASVYYVGPNGWKKLSGDDVGELH+KYY VV+DT EQEMVE+ G
Subjt:  YRYNLSVEEVAELARRTIYHATFQDG-----ASVYYVGPNGWKKLSGDDVGELHYKYYLVVSDTDEQEMVEVVG

A0A6J1HQU8 Proteasome subunit beta4.4e-2477.03Show/hide
Query:  YRYNLSVEEVAELARRTIYHATFQDG-----ASVYYVGPNGWKKLSGDDVGELHYKYYLVVSDTDEQEMVEVVG
        YRY++S+EE AELARR IYHATF+DG     ASVYYVGPNGWKKLSGDDVGELH+KYY VV+DT EQEMVE+ G
Subjt:  YRYNLSVEEVAELARRTIYHATFQDG-----ASVYYVGPNGWKKLSGDDVGELHYKYYLVVSDTDEQEMVEVVG

SwissProt top hitse value%identityAlignment
O23717 Proteasome subunit beta type-5-A6.3e-2067.61Show/hide
Query:  YRYNLSVEEVAELARRTIYHATFQDG-----ASVYYVGPNGWKKLSGDDVGELHYKYYLVVSDTDEQEMVE
        Y+Y++SVEE +ELARR+IYHATF+DG     ASVY+VGP GW KLSGDDVGELHY YY V   T EQ M E
Subjt:  YRYNLSVEEVAELARRTIYHATFQDG-----ASVYYVGPNGWKKLSGDDVGELHYKYYLVVSDTDEQEMVE

O24361 Proteasome subunit beta type-54.0e-2266.22Show/hide
Query:  YRYNLSVEEVAELARRTIYHATFQDGA-----SVYYVGPNGWKKLSGDDVGELHYKYYLVVSDTDEQEMVEVVG
        Y+Y+++VEE +ELARR IYHAT++DGA     SVY+VGP+GWKK++GDDVG+LH++YY VV  T EQEMVEVVG
Subjt:  YRYNLSVEEVAELARRTIYHATFQDGA-----SVYYVGPNGWKKLSGDDVGELHYKYYLVVSDTDEQEMVEVVG

Q32KL2 Proteasome subunit beta type-51.6e-0747.37Show/hide
Query:  YRYNLSVEEVAELARRTIYHATFQD-----GASVYYVGPNGWKKLSGDDVGELHYKY
        Y Y+L VEE  +LARR IY AT++D       S+Y+V  +GW ++S D+V +LH KY
Subjt:  YRYNLSVEEVAELARRTIYHATFQD-----GASVYYVGPNGWKKLSGDDVGELHYKY

Q54BC8 Proteasome subunit beta type-54.2e-0844.26Show/hide
Query:  YRYNLSVEEVAELARRTIYHATFQDGAS-----VYYVGPNGWKKLSGDDVGELHYKYYLVV
        ++++++ EE  EL RR +YHAT +D  S     VY+V  +GWKK+S DD  +L+ KYY +V
Subjt:  YRYNLSVEEVAELARRTIYHATFQDGAS-----VYYVGPNGWKKLSGDDVGELHYKYYLVV

Q9LIP2 Proteasome subunit beta type-5-B9.1e-1964.79Show/hide
Query:  YRYNLSVEEVAELARRTIYHATFQDG-----ASVYYVGPNGWKKLSGDDVGELHYKYYLVVSDTDEQEMVE
        Y++++SVEE +ELARR+IYHATF+DG     ASVY+VGP GW KLSGDDVGELHY YY V   T E  M E
Subjt:  YRYNLSVEEVAELARRTIYHATFQDG-----ASVYYVGPNGWKKLSGDDVGELHYKYYLVVSDTDEQEMVE

Arabidopsis top hitse value%identityAlignment
AT1G13060.1 20S proteasome beta subunit E14.5e-2167.61Show/hide
Query:  YRYNLSVEEVAELARRTIYHATFQDG-----ASVYYVGPNGWKKLSGDDVGELHYKYYLVVSDTDEQEMVE
        Y+Y++SVEE +ELARR+IYHATF+DG     ASVY+VGP GW KLSGDDVGELHY YY V   T EQ M E
Subjt:  YRYNLSVEEVAELARRTIYHATFQDG-----ASVYYVGPNGWKKLSGDDVGELHYKYYLVVSDTDEQEMVE

AT1G13060.2 20S proteasome beta subunit E14.5e-2167.61Show/hide
Query:  YRYNLSVEEVAELARRTIYHATFQDG-----ASVYYVGPNGWKKLSGDDVGELHYKYYLVVSDTDEQEMVE
        Y+Y++SVEE +ELARR+IYHATF+DG     ASVY+VGP GW KLSGDDVGELHY YY V   T EQ M E
Subjt:  YRYNLSVEEVAELARRTIYHATFQDG-----ASVYYVGPNGWKKLSGDDVGELHYKYYLVVSDTDEQEMVE

AT3G26340.1 N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein6.5e-2064.79Show/hide
Query:  YRYNLSVEEVAELARRTIYHATFQDG-----ASVYYVGPNGWKKLSGDDVGELHYKYYLVVSDTDEQEMVE
        Y++++SVEE +ELARR+IYHATF+DG     ASVY+VGP GW KLSGDDVGELHY YY V   T E  M E
Subjt:  YRYNLSVEEVAELARRTIYHATFQDG-----ASVYYVGPNGWKKLSGDDVGELHYKYYLVVSDTDEQEMVE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCAAACTTTAATTTGGATTTGAGGCATTCTGATTTCCAACGTATCTGCATTTATCGGTACAATTTGTCAGTTGAAGAAGTTGCTGAATTGGCTAGAAGAACAATTTA
TCATGCAACATTCCAAGACGGGGCGAGTGTTTATTATGTTGGACCAAATGGATGGAAGAAACTATCTGGTGATGATGTTGGAGAACTTCACTACAAATATTATCTGGTTG
TATCTGATACAGATGAACAGGAAATGGTTGAAGTCGTTGGGTAG
mRNA sequenceShow/hide mRNA sequence
ATGTCAAACTTTAATTTGGATTTGAGGCATTCTGATTTCCAACGTATCTGCATTTATCGGTACAATTTGTCAGTTGAAGAAGTTGCTGAATTGGCTAGAAGAACAATTTA
TCATGCAACATTCCAAGACGGGGCGAGTGTTTATTATGTTGGACCAAATGGATGGAAGAAACTATCTGGTGATGATGTTGGAGAACTTCACTACAAATATTATCTGGTTG
TATCTGATACAGATGAACAGGAAATGGTTGAAGTCGTTGGGTAG
Protein sequenceShow/hide protein sequence
MSNFNLDLRHSDFQRICIYRYNLSVEEVAELARRTIYHATFQDGASVYYVGPNGWKKLSGDDVGELHYKYYLVVSDTDEQEMVEVVG