; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10015134 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10015134
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionABC transporter C family member 3
Genome locationChr02:24194603..24195107
RNA-Seq ExpressionHG10015134
SyntenyHG10015134
Gene Ontology termsGO:0055085 - transmembrane transport (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0005524 - ATP binding (molecular function)
GO:0140359 - ABC-type transmembrane transporter activity (molecular function)
InterPro domainsIPR036640 - ABC transporter type 1, transmembrane domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0034219.1 putative ABC transporter C family member 15 [Cucumis melo var. makuwa]7.5e-5389.08Show/hide
Query:  MVGIRKAPILHHFSETVVGATIIGCFNQEDRFLTKTLNLIDDYSRVVFHNSTSMEWLCLRINFLFDIVFFLALIILVALPRSAINPSLTGLAATYALDMN
        MVGIRKAPILHHFSETVVGATII CFNQEDRFL K LNL+DDYSRVVFHNSTSMEWLCLRINFLFD+VFFLALIILV LPR+AI+PSL GLAATY L+MN
Subjt:  MVGIRKAPILHHFSETVVGATIIGCFNQEDRFLTKTLNLIDDYSRVVFHNSTSMEWLCLRINFLFDIVFFLALIILVALPRSAINPSLTGLAATYALDMN

Query:  VVQAWVIWKLCNVENKMIS
        V+QAWVIW LCNVENKMIS
Subjt:  VVQAWVIWKLCNVENKMIS

KAG6601577.1 ABC transporter C family member 3, partial [Cucurbita argyrosperma subsp. sororia]9.8e-5388.24Show/hide
Query:  MVGIRKAPILHHFSETVVGATIIGCFNQEDRFLTKTLNLIDDYSRVVFHNSTSMEWLCLRINFLFDIVFFLALIILVALPRSAINPSLTGLAATYALDMN
        MVGIRKAPILHHFSETVVGATII CFNQEDRFL KTL L+DDYSRVVFHNSTSMEWLCLRINFLFD+VFFLAL+ILV LPR+AI+PSL GLAATY L+MN
Subjt:  MVGIRKAPILHHFSETVVGATIIGCFNQEDRFLTKTLNLIDDYSRVVFHNSTSMEWLCLRINFLFDIVFFLALIILVALPRSAINPSLTGLAATYALDMN

Query:  VVQAWVIWKLCNVENKMIS
        V+QAWVIW LCNVENKMIS
Subjt:  VVQAWVIWKLCNVENKMIS

XP_004135511.2 putative ABC transporter C family member 15 [Cucumis sativus]7.5e-5389.08Show/hide
Query:  MVGIRKAPILHHFSETVVGATIIGCFNQEDRFLTKTLNLIDDYSRVVFHNSTSMEWLCLRINFLFDIVFFLALIILVALPRSAINPSLTGLAATYALDMN
        MVGIRKAPILHHFSETVVGATII CFNQEDRFL K LNL+DDYSRVVFHNSTSMEWLCLRINFLFD+VFFLALIILV LPR+AI+PSL GLAATY L+MN
Subjt:  MVGIRKAPILHHFSETVVGATIIGCFNQEDRFLTKTLNLIDDYSRVVFHNSTSMEWLCLRINFLFDIVFFLALIILVALPRSAINPSLTGLAATYALDMN

Query:  VVQAWVIWKLCNVENKMIS
        V+QAWVIW LCNVENKMIS
Subjt:  VVQAWVIWKLCNVENKMIS

XP_008446087.1 PREDICTED: putative ABC transporter C family member 15 [Cucumis melo]7.5e-5389.08Show/hide
Query:  MVGIRKAPILHHFSETVVGATIIGCFNQEDRFLTKTLNLIDDYSRVVFHNSTSMEWLCLRINFLFDIVFFLALIILVALPRSAINPSLTGLAATYALDMN
        MVGIRKAPILHHFSETVVGATII CFNQEDRFL K LNL+DDYSRVVFHNSTSMEWLCLRINFLFD+VFFLALIILV LPR+AI+PSL GLAATY L+MN
Subjt:  MVGIRKAPILHHFSETVVGATIIGCFNQEDRFLTKTLNLIDDYSRVVFHNSTSMEWLCLRINFLFDIVFFLALIILVALPRSAINPSLTGLAATYALDMN

Query:  VVQAWVIWKLCNVENKMIS
        V+QAWVIW LCNVENKMIS
Subjt:  VVQAWVIWKLCNVENKMIS

XP_022151948.1 putative ABC transporter C family member 15 [Momordica charantia]3.4e-5389.08Show/hide
Query:  MVGIRKAPILHHFSETVVGATIIGCFNQEDRFLTKTLNLIDDYSRVVFHNSTSMEWLCLRINFLFDIVFFLALIILVALPRSAINPSLTGLAATYALDMN
        MVGIRKAPILHHFSETVVGATII CFNQE+RFLTK LNL+DDYSRVVFHN+TSMEWLCLRINFLFDIVFFLAL+ILV+LPRSAI+PSL GLAATY L+MN
Subjt:  MVGIRKAPILHHFSETVVGATIIGCFNQEDRFLTKTLNLIDDYSRVVFHNSTSMEWLCLRINFLFDIVFFLALIILVALPRSAINPSLTGLAATYALDMN

Query:  VVQAWVIWKLCNVENKMIS
        V+QAWVIW LCNVENKMIS
Subjt:  VVQAWVIWKLCNVENKMIS

TrEMBL top hitse value%identityAlignment
A0A0A0KS22 Uncharacterized protein3.6e-5389.08Show/hide
Query:  MVGIRKAPILHHFSETVVGATIIGCFNQEDRFLTKTLNLIDDYSRVVFHNSTSMEWLCLRINFLFDIVFFLALIILVALPRSAINPSLTGLAATYALDMN
        MVGIRKAPILHHFSETVVGATII CFNQEDRFL K LNL+DDYSRVVFHNSTSMEWLCLRINFLFD+VFFLALIILV LPR+AI+PSL GLAATY L+MN
Subjt:  MVGIRKAPILHHFSETVVGATIIGCFNQEDRFLTKTLNLIDDYSRVVFHNSTSMEWLCLRINFLFDIVFFLALIILVALPRSAINPSLTGLAATYALDMN

Query:  VVQAWVIWKLCNVENKMIS
        V+QAWVIW LCNVENKMIS
Subjt:  VVQAWVIWKLCNVENKMIS

A0A1S3BF27 putative ABC transporter C family member 153.6e-5389.08Show/hide
Query:  MVGIRKAPILHHFSETVVGATIIGCFNQEDRFLTKTLNLIDDYSRVVFHNSTSMEWLCLRINFLFDIVFFLALIILVALPRSAINPSLTGLAATYALDMN
        MVGIRKAPILHHFSETVVGATII CFNQEDRFL K LNL+DDYSRVVFHNSTSMEWLCLRINFLFD+VFFLALIILV LPR+AI+PSL GLAATY L+MN
Subjt:  MVGIRKAPILHHFSETVVGATIIGCFNQEDRFLTKTLNLIDDYSRVVFHNSTSMEWLCLRINFLFDIVFFLALIILVALPRSAINPSLTGLAATYALDMN

Query:  VVQAWVIWKLCNVENKMIS
        V+QAWVIW LCNVENKMIS
Subjt:  VVQAWVIWKLCNVENKMIS

A0A5D3CUX0 Putative ABC transporter C family member 153.6e-5389.08Show/hide
Query:  MVGIRKAPILHHFSETVVGATIIGCFNQEDRFLTKTLNLIDDYSRVVFHNSTSMEWLCLRINFLFDIVFFLALIILVALPRSAINPSLTGLAATYALDMN
        MVGIRKAPILHHFSETVVGATII CFNQEDRFL K LNL+DDYSRVVFHNSTSMEWLCLRINFLFD+VFFLALIILV LPR+AI+PSL GLAATY L+MN
Subjt:  MVGIRKAPILHHFSETVVGATIIGCFNQEDRFLTKTLNLIDDYSRVVFHNSTSMEWLCLRINFLFDIVFFLALIILVALPRSAINPSLTGLAATYALDMN

Query:  VVQAWVIWKLCNVENKMIS
        V+QAWVIW LCNVENKMIS
Subjt:  VVQAWVIWKLCNVENKMIS

A0A6J1DDJ4 putative ABC transporter C family member 151.6e-5389.08Show/hide
Query:  MVGIRKAPILHHFSETVVGATIIGCFNQEDRFLTKTLNLIDDYSRVVFHNSTSMEWLCLRINFLFDIVFFLALIILVALPRSAINPSLTGLAATYALDMN
        MVGIRKAPILHHFSETVVGATII CFNQE+RFLTK LNL+DDYSRVVFHN+TSMEWLCLRINFLFDIVFFLAL+ILV+LPRSAI+PSL GLAATY L+MN
Subjt:  MVGIRKAPILHHFSETVVGATIIGCFNQEDRFLTKTLNLIDDYSRVVFHNSTSMEWLCLRINFLFDIVFFLALIILVALPRSAINPSLTGLAATYALDMN

Query:  VVQAWVIWKLCNVENKMIS
        V+QAWVIW LCNVENKMIS
Subjt:  VVQAWVIWKLCNVENKMIS

A0A6J1K6R8 putative ABC transporter C family member 154.7e-5388.24Show/hide
Query:  MVGIRKAPILHHFSETVVGATIIGCFNQEDRFLTKTLNLIDDYSRVVFHNSTSMEWLCLRINFLFDIVFFLALIILVALPRSAINPSLTGLAATYALDMN
        MVGIRKAPILHHFSETVVGATII CFNQEDRFL KTL L+DDYSRVVFHNSTSMEWLCLRINFLFD+VFFLAL+ILV LPR+AI+PSL GLAATY L+MN
Subjt:  MVGIRKAPILHHFSETVVGATIIGCFNQEDRFLTKTLNLIDDYSRVVFHNSTSMEWLCLRINFLFDIVFFLALIILVALPRSAINPSLTGLAATYALDMN

Query:  VVQAWVIWKLCNVENKMIS
        V+QAWVIW LCNVENKMIS
Subjt:  VVQAWVIWKLCNVENKMIS

SwissProt top hitse value%identityAlignment
Q7FB56 Putative ABC transporter C family member 154.5e-3254.62Show/hide
Query:  MVGIRKAPILHHFSETVVGATIIGCFNQEDRFLTKTLNLIDDYSRVVFHNSTSMEWLCLRINFLFDIVFFLALIILVALPRSAINPSLTGLAATYALDMN
        M G+ +APILHHF+E++ GAT I  F+Q DRF++  L LID +SR  FH +++MEWL  R+N L   VF  +L++LV LP   INPS+ GL  TY L +N
Subjt:  MVGIRKAPILHHFSETVVGATIIGCFNQEDRFLTKTLNLIDDYSRVVFHNSTSMEWLCLRINFLFDIVFFLALIILVALPRSAINPSLTGLAATYALDMN

Query:  VVQAWVIWKLCNVENKMIS
        V+QA VIW +CN ENKMIS
Subjt:  VVQAWVIWKLCNVENKMIS

Q8VZZ4 ABC transporter C family member 61.6e-2952.1Show/hide
Query:  MVGIRKAPILHHFSETVVGATIIGCFNQEDRFLTKTLNLIDDYSRVVFHNSTSMEWLCLRINFLFDIVFFLALIILVALPRSAINPSLTGLAATYALDMN
        + GI ++P++HHFSET+ G T I  F+QE RF    + L D YSR+ FH++ +MEWLC R+  L    F  +L+ILV+ P   INPSL GLA TYAL++N
Subjt:  MVGIRKAPILHHFSETVVGATIIGCFNQEDRFLTKTLNLIDDYSRVVFHNSTSMEWLCLRINFLFDIVFFLALIILVALPRSAINPSLTGLAATYALDMN

Query:  VVQAWVIWKLCNVENKMIS
         +QA +IW LC++ENKMIS
Subjt:  VVQAWVIWKLCNVENKMIS

Q9LK62 ABC transporter C family member 72.1e-2952.99Show/hide
Query:  GIRKAPILHHFSETVVGATIIGCFNQEDRFLTKTLNLIDDYSRVVFHNSTSMEWLCLRINFLFDIVFFLALIILVALPRSAINPSLTGLAATYALDMNVV
        GI ++P++ HFSET+ G T I  F+QE RF T  + L D YSR+ FH  ++MEWLC R++ L  + F L+L+ILV++P   INPS  GLA TYAL++N +
Subjt:  GIRKAPILHHFSETVVGATIIGCFNQEDRFLTKTLNLIDDYSRVVFHNSTSMEWLCLRINFLFDIVFFLALIILVALPRSAINPSLTGLAATYALDMNVV

Query:  QAWVIWKLCNVENKMIS
        QA +IW LC++ENKMIS
Subjt:  QAWVIWKLCNVENKMIS

Q9LK64 ABC transporter C family member 31.1e-3051.26Show/hide
Query:  MVGIRKAPILHHFSETVVGATIIGCFNQEDRFLTKTLNLIDDYSRVVFHNSTSMEWLCLRINFLFDIVFFLALIILVALPRSAINPSLTGLAATYALDMN
        +VG+ KAP++ HFSET+ GAT I  F+QE RF +  + L D YSR  F+ + +MEWLC R++ L  + F  +L+ LV++P   I+PSL GLA TY L +N
Subjt:  MVGIRKAPILHHFSETVVGATIIGCFNQEDRFLTKTLNLIDDYSRVVFHNSTSMEWLCLRINFLFDIVFFLALIILVALPRSAINPSLTGLAATYALDMN

Query:  VVQAWVIWKLCNVENKMIS
         +QAW+IW LCN+ENK+IS
Subjt:  VVQAWVIWKLCNVENKMIS

Q9M1C7 ABC transporter C family member 94.5e-3254.62Show/hide
Query:  MVGIRKAPILHHFSETVVGATIIGCFNQEDRFLTKTLNLIDDYSRVVFHNSTSMEWLCLRINFLFDIVFFLALIILVALPRSAINPSLTGLAATYALDMN
        M G+ +APILHHF+E++ GAT I  F+Q DRF++  L LID +SR  FH +++MEWL  R+N L   VF  +L++LV LP   INPS+ GL  TY L +N
Subjt:  MVGIRKAPILHHFSETVVGATIIGCFNQEDRFLTKTLNLIDDYSRVVFHNSTSMEWLCLRINFLFDIVFFLALIILVALPRSAINPSLTGLAATYALDMN

Query:  VVQAWVIWKLCNVENKMIS
        V+QA VIW +CN ENKMIS
Subjt:  VVQAWVIWKLCNVENKMIS

Arabidopsis top hitse value%identityAlignment
AT3G13080.1 multidrug resistance-associated protein 37.8e-3251.26Show/hide
Query:  MVGIRKAPILHHFSETVVGATIIGCFNQEDRFLTKTLNLIDDYSRVVFHNSTSMEWLCLRINFLFDIVFFLALIILVALPRSAINPSLTGLAATYALDMN
        +VG+ KAP++ HFSET+ GAT I  F+QE RF +  + L D YSR  F+ + +MEWLC R++ L  + F  +L+ LV++P   I+PSL GLA TY L +N
Subjt:  MVGIRKAPILHHFSETVVGATIIGCFNQEDRFLTKTLNLIDDYSRVVFHNSTSMEWLCLRINFLFDIVFFLALIILVALPRSAINPSLTGLAATYALDMN

Query:  VVQAWVIWKLCNVENKMIS
         +QAW+IW LCN+ENK+IS
Subjt:  VVQAWVIWKLCNVENKMIS

AT3G13080.2 multidrug resistance-associated protein 37.8e-3251.26Show/hide
Query:  MVGIRKAPILHHFSETVVGATIIGCFNQEDRFLTKTLNLIDDYSRVVFHNSTSMEWLCLRINFLFDIVFFLALIILVALPRSAINPSLTGLAATYALDMN
        +VG+ KAP++ HFSET+ GAT I  F+QE RF +  + L D YSR  F+ + +MEWLC R++ L  + F  +L+ LV++P   I+PSL GLA TY L +N
Subjt:  MVGIRKAPILHHFSETVVGATIIGCFNQEDRFLTKTLNLIDDYSRVVFHNSTSMEWLCLRINFLFDIVFFLALIILVALPRSAINPSLTGLAATYALDMN

Query:  VVQAWVIWKLCNVENKMIS
         +QAW+IW LCN+ENK+IS
Subjt:  VVQAWVIWKLCNVENKMIS

AT3G13090.1 multidrug resistance-associated protein 81.1e-3052.1Show/hide
Query:  MVGIRKAPILHHFSETVVGATIIGCFNQEDRFLTKTLNLIDDYSRVVFHNSTSMEWLCLRINFLFDIVFFLALIILVALPRSAINPSLTGLAATYALDMN
        + GI ++P++HHFSET+ G T I  F+QE RF    + L D YSR+ FH++ +MEWLC R+  L    F  +L+ILV+ P   INPSL GLA TYAL++N
Subjt:  MVGIRKAPILHHFSETVVGATIIGCFNQEDRFLTKTLNLIDDYSRVVFHNSTSMEWLCLRINFLFDIVFFLALIILVALPRSAINPSLTGLAATYALDMN

Query:  VVQAWVIWKLCNVENKMIS
         +QA +IW LC++ENKMIS
Subjt:  VVQAWVIWKLCNVENKMIS

AT3G60160.1 multidrug resistance-associated protein 93.2e-3354.62Show/hide
Query:  MVGIRKAPILHHFSETVVGATIIGCFNQEDRFLTKTLNLIDDYSRVVFHNSTSMEWLCLRINFLFDIVFFLALIILVALPRSAINPSLTGLAATYALDMN
        M G+ +APILHHF+E++ GAT I  F+Q DRF++  L LID +SR  FH +++MEWL  R+N L   VF  +L++LV LP   INPS+ GL  TY L +N
Subjt:  MVGIRKAPILHHFSETVVGATIIGCFNQEDRFLTKTLNLIDDYSRVVFHNSTSMEWLCLRINFLFDIVFFLALIILVALPRSAINPSLTGLAATYALDMN

Query:  VVQAWVIWKLCNVENKMIS
        V+QA VIW +CN ENKMIS
Subjt:  VVQAWVIWKLCNVENKMIS

AT3G60970.1 multidrug resistance-associated protein 153.2e-3354.62Show/hide
Query:  MVGIRKAPILHHFSETVVGATIIGCFNQEDRFLTKTLNLIDDYSRVVFHNSTSMEWLCLRINFLFDIVFFLALIILVALPRSAINPSLTGLAATYALDMN
        M G+ +APILHHF+E++ GAT I  F+Q DRF++  L LID +SR  FH +++MEWL  R+N L   VF  +L++LV LP   INPS+ GL  TY L +N
Subjt:  MVGIRKAPILHHFSETVVGATIIGCFNQEDRFLTKTLNLIDDYSRVVFHNSTSMEWLCLRINFLFDIVFFLALIILVALPRSAINPSLTGLAATYALDMN

Query:  VVQAWVIWKLCNVENKMIS
        V+QA VIW +CN ENKMIS
Subjt:  VVQAWVIWKLCNVENKMIS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGGGAATTCGAAAAGCTCCAATTCTTCATCATTTTTCAGAAACAGTCGTAGGTGCAACCATTATCGGTTGCTTCAATCAGGAGGATCGTTTCTTGACGAAAACACT
GAACTTGATTGATGATTATTCTCGTGTGGTTTTTCACAACTCAACTTCAATGGAATGGTTATGTCTACGAATCAATTTTCTTTTCGACATTGTTTTCTTCCTAGCACTCA
TCATCTTAGTGGCCCTTCCAAGATCTGCAATAAATCCAAGCTTAACAGGATTAGCTGCCACATATGCTTTGGACATGAATGTTGTTCAGGCTTGGGTGATATGGAAGTTA
TGCAATGTTGAAAATAAAATGATATCTACATGA
mRNA sequenceShow/hide mRNA sequence
ATGGTGGGAATTCGAAAAGCTCCAATTCTTCATCATTTTTCAGAAACAGTCGTAGGTGCAACCATTATCGGTTGCTTCAATCAGGAGGATCGTTTCTTGACGAAAACACT
GAACTTGATTGATGATTATTCTCGTGTGGTTTTTCACAACTCAACTTCAATGGAATGGTTATGTCTACGAATCAATTTTCTTTTCGACATTGTTTTCTTCCTAGCACTCA
TCATCTTAGTGGCCCTTCCAAGATCTGCAATAAATCCAAGCTTAACAGGATTAGCTGCCACATATGCTTTGGACATGAATGTTGTTCAGGCTTGGGTGATATGGAAGTTA
TGCAATGTTGAAAATAAAATGATATCTACATGA
Protein sequenceShow/hide protein sequence
MVGIRKAPILHHFSETVVGATIIGCFNQEDRFLTKTLNLIDDYSRVVFHNSTSMEWLCLRINFLFDIVFFLALIILVALPRSAINPSLTGLAATYALDMNVVQAWVIWKL
CNVENKMIST