; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10015217 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10015217
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionPectin lyase-like superfamily protein
Genome locationChr02:24901415..24904120
RNA-Seq ExpressionHG10015217
SyntenyHG10015217
Gene Ontology termsGO:0005975 - carbohydrate metabolic process (biological process)
GO:0004650 - polygalacturonase activity (molecular function)
InterPro domainsIPR000743 - Glycoside hydrolase, family 28
IPR006626 - Parallel beta-helix repeat
IPR011050 - Pectin lyase fold/virulence factor
IPR012334 - Pectin lyase fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7032297.1 Polygalacturonase, partial [Cucurbita argyrosperma subsp. argyrosperma]1.8e-15788.22Show/hide
Query:  MKQRSKNLTLSLFLFLVVSLLVSSSIVRVEARKQYHSKKGKHQKQKGAGNGNGSGSAPAPLPDYNQTQSTVFNILSFGAKGNGISDDSKALLAAWKAACE
        MKQRSKNLTLSL LFLVVSLLVSSS+VRVEARKQYHSKK KHQKQKG  NGNGSG AP P PDYNQTQST+FNI+SFGAKGNG+ DDSKALLAAW+AACE
Subjt:  MKQRSKNLTLSLFLFLVVSLLVSSSIVRVEARKQYHSKKGKHQKQKGAGNGNGSGSAPAPLPDYNQTQSTVFNILSFGAKGNGISDDSKALLAAWKAACE

Query:  IPGATLEIPSQYKFLIKPITLNGPCMPQLVVQIDGAVLAPPKVSTWPKSSLFQWLNFKWLHNFTIQGSGTVDGQGFNWWTLSTFYTNKKKLKHIPDMKPT
          GATLEIPSQYKFLIKPITL GPCMPQLV+QIDGAVLAP +VS+WPKSSLFQWLNFKWLHNFTIQGSGTVDG GFNWW  S F  NKKK+K+ PDMKP 
Subjt:  IPGATLEIPSQYKFLIKPITLNGPCMPQLVVQIDGAVLAPPKVSTWPKSSLFQWLNFKWLHNFTIQGSGTVDGQGFNWWTLSTFYTNKKKLKHIPDMKPT

Query:  ALRFYSSYNVTVRDITIINSPQCHLKFDNSGTVKVDNITISSPENSPNTDGIHLQNTQDVEIQHSNIGCDYFLAYNYSLGGLGKDKSAACVSNIVVQNIS
        ALRFYSS+NVTVRDITIINSPQCHLKFDNSGTV+VDNITISSPENSPNTDGIHLQNTQDVEIQHSNI CD FLAYNYSLGGLGKD++AACVSNIVV+NIS
Subjt:  ALRFYSSYNVTVRDITIINSPQCHLKFDNSGTVKVDNITISSPENSPNTDGIHLQNTQDVEIQHSNIGCDYFLAYNYSLGGLGKDKSAACVSNIVVQNIS

Query:  IQNTLSGVRIKTWQ
        IQNTLSGVRIKTWQ
Subjt:  IQNTLSGVRIKTWQ

TYK15622.1 polygalacturonase [Cucumis melo var. makuwa]1.2e-14584.74Show/hide
Query:  IVRVEARKQYHSKKGKHQKQKGAGNGNGSGSAPAPLPDYNQTQSTVFNILSFGAKGNGISDDSKALLAAWKAACEIPGATLEIPSQYKFLIKPITLNGPC
        +VRVEARKQYH KK KHQKQKG GNG+GSG APAPLP YNQ+QST+FNILSFGAKGNG+SDDSKALLAAWKAACEIPGATLEIPSQ+KFLIKPITLNGPC
Subjt:  IVRVEARKQYHSKKGKHQKQKGAGNGNGSGSAPAPLPDYNQTQSTVFNILSFGAKGNGISDDSKALLAAWKAACEIPGATLEIPSQYKFLIKPITLNGPC

Query:  MPQLVVQIDGAVLAPPKVSTWPKSSLFQWLNFKWLHNFTIQGSGTVDGQGFNWWTLSTFYTNKKKLKHIPDMKPTALRFYSSYNVTVRDITIINSPQCHL
        M QLV+QIDGAVLAPPKVS+WPKSSLFQWLNFKWLHNFT+QGSGTV+GQGFNWWTLSTFY NKKKLKHIPDMKPTALRFYSSYNVTVRDITIINSPQCHL
Subjt:  MPQLVVQIDGAVLAPPKVSTWPKSSLFQWLNFKWLHNFTIQGSGTVDGQGFNWWTLSTFYTNKKKLKHIPDMKPTALRFYSSYNVTVRDITIINSPQCHL

Query:  KFDNSGTVKVDNITISSPENSPNTDGIHLQNTQDVEIQHSNIGC-------------------DYFLAYNYSLGGLGKDKSAACVSNIVVQNISIQNTLS
        KFDNSG VK+DNITISSPENSPNTDGIHLQNT+DVEIQHSNIGC                   +    +  SLGGLGKDKSAACVSNIVVQNISIQNTLS
Subjt:  KFDNSGTVKVDNITISSPENSPNTDGIHLQNTQDVEIQHSNIGC-------------------DYFLAYNYSLGGLGKDKSAACVSNIVVQNISIQNTLS

Query:  GVRIKTWQ
        GVRIKTWQ
Subjt:  GVRIKTWQ

XP_008446184.2 PREDICTED: polygalacturonase At1g48100 [Cucumis melo]2.3e-14984.86Show/hide
Query:  VVSLLVSSSIVRVEARKQYHSKKGKHQKQKGAGNGNGSGSAPAPLPDYNQTQSTVFNILSFGAKGNGISDDSKALLAAWKAACEIPGATLEIPSQYKFLI
        +VSLLVSSS+VRVEARKQYH KK KHQKQKG GNG+GSG APAPLP YNQ+QST+FNILSFGAKGNG+SDDSKALLAAWKAACEIPGATLEIPSQ+KFLI
Subjt:  VVSLLVSSSIVRVEARKQYHSKKGKHQKQKGAGNGNGSGSAPAPLPDYNQTQSTVFNILSFGAKGNGISDDSKALLAAWKAACEIPGATLEIPSQYKFLI

Query:  KPITLNGPCMPQLVVQIDGAVLAPPKVSTWPKSSLFQWLNFKWLHNFTIQGSGTVDGQGFNWWTLSTFYTNKKKLKHIPDMKPTALRFYSSYNVTVRDIT
        KPITLNGPCM QLV+QIDGAVLAPPKVS+WPKSSLFQWLNFKWLHNFT+QGSGTV+GQGFNWWTLSTFY NKKKLKHIPDMKPTALRFYSSYNVTVRDIT
Subjt:  KPITLNGPCMPQLVVQIDGAVLAPPKVSTWPKSSLFQWLNFKWLHNFTIQGSGTVDGQGFNWWTLSTFYTNKKKLKHIPDMKPTALRFYSSYNVTVRDIT

Query:  IINSPQCHLKFDNSGTVKVDNITISSPENSPNTDGIHLQNTQDVEIQHSNIGC-------------------DYFLAYNYSLGGLGKDKSAACVSNIVVQ
        IINSPQCHLKFDNSG VK+DNITISSPENSPNTDGIHLQNT+DVEIQHSNIGC                   +    +  SLGGLGKDKSAACVSNIVVQ
Subjt:  IINSPQCHLKFDNSGTVKVDNITISSPENSPNTDGIHLQNTQDVEIQHSNIGC-------------------DYFLAYNYSLGGLGKDKSAACVSNIVVQ

Query:  NISIQNTLSGVRIKTWQ
        NISIQNTLSGVRIKTWQ
Subjt:  NISIQNTLSGVRIKTWQ

XP_022944896.1 polygalacturonase At1g48100 isoform X1 [Cucurbita moschata]3.8e-14477.39Show/hide
Query:  MKQRSKNLTLSLFLFLVVSLLVSSSIVRVEARKQYHSKKGKHQKQKGAGNGNGSGSAPAPLPDYNQTQSTVFNILSFGAKGNGISDDSKALLAAWKAACE
        M + SK LTL L     VSLLVSSS+V +EARK +H+KK KHQKQ+G G G+GS  APAPLPDYNQTQST+FNILSFGAKGNG+ DDSKAL+AAWKAAC+
Subjt:  MKQRSKNLTLSLFLFLVVSLLVSSSIVRVEARKQYHSKKGKHQKQKGAGNGNGSGSAPAPLPDYNQTQSTVFNILSFGAKGNGISDDSKALLAAWKAACE

Query:  IPGATLEIPSQYKFLIKPITLNGPCMPQLVV-QIDGAVLAPPKVSTWPKSSLFQWLNFKWLHNFTIQGSGTVDGQGFNWWTLSTFYTNKKKLKHIPDMKP
        IPGATL+IPS YKFLIKPITLNGPCMPQLV+ QIDG VLAPPKVS+W KSSLFQWLNFKWLHNFTI G GTVDGQGFNWWT+ST Y NKKK KHIPDMKP
Subjt:  IPGATLEIPSQYKFLIKPITLNGPCMPQLVV-QIDGAVLAPPKVSTWPKSSLFQWLNFKWLHNFTIQGSGTVDGQGFNWWTLSTFYTNKKKLKHIPDMKP

Query:  TALRFYSSYNVTVRDITIINSPQCHLKFDNSGTVKVDNITISSPENSPNTDGIHLQNTQDVEIQHSNIGC------------------------------
        TALRFYSSYNVTVRDITI NSPQCHLKFDNSGTVKV+NITISSPE+SPNTDGIHLQNTQDVEIQHSNIGC                              
Subjt:  TALRFYSSYNVTVRDITIINSPQCHLKFDNSGTVKVDNITISSPENSPNTDGIHLQNTQDVEIQHSNIGC------------------------------

Query:  DYFLAYNYSLGGLGKDKSAACVSNIVVQNISIQNTLSGVRIKTWQ
          FLAYNYSLGGLGKDKS ACVSNIVV+NISIQNTLSGVRIKTWQ
Subjt:  DYFLAYNYSLGGLGKDKSAACVSNIVVQNISIQNTLSGVRIKTWQ

XP_022944897.1 polygalacturonase At1g48100 isoform X2 [Cucurbita moschata]1.6e-14577.62Show/hide
Query:  MKQRSKNLTLSLFLFLVVSLLVSSSIVRVEARKQYHSKKGKHQKQKGAGNGNGSGSAPAPLPDYNQTQSTVFNILSFGAKGNGISDDSKALLAAWKAACE
        M + SK LTL L     VSLLVSSS+V +EARK +H+KK KHQKQ+G G G+GS  APAPLPDYNQTQST+FNILSFGAKGNG+ DDSKAL+AAWKAAC+
Subjt:  MKQRSKNLTLSLFLFLVVSLLVSSSIVRVEARKQYHSKKGKHQKQKGAGNGNGSGSAPAPLPDYNQTQSTVFNILSFGAKGNGISDDSKALLAAWKAACE

Query:  IPGATLEIPSQYKFLIKPITLNGPCMPQLVVQIDGAVLAPPKVSTWPKSSLFQWLNFKWLHNFTIQGSGTVDGQGFNWWTLSTFYTNKKKLKHIPDMKPT
        IPGATL+IPS YKFLIKPITLNGPCMPQLV+QIDG VLAPPKVS+W KSSLFQWLNFKWLHNFTI G GTVDGQGFNWWT+ST Y NKKK KHIPDMKPT
Subjt:  IPGATLEIPSQYKFLIKPITLNGPCMPQLVVQIDGAVLAPPKVSTWPKSSLFQWLNFKWLHNFTIQGSGTVDGQGFNWWTLSTFYTNKKKLKHIPDMKPT

Query:  ALRFYSSYNVTVRDITIINSPQCHLKFDNSGTVKVDNITISSPENSPNTDGIHLQNTQDVEIQHSNIGC------------------------------D
        ALRFYSSYNVTVRDITI NSPQCHLKFDNSGTVKV+NITISSPE+SPNTDGIHLQNTQDVEIQHSNIGC                               
Subjt:  ALRFYSSYNVTVRDITIINSPQCHLKFDNSGTVKVDNITISSPENSPNTDGIHLQNTQDVEIQHSNIGC------------------------------D

Query:  YFLAYNYSLGGLGKDKSAACVSNIVVQNISIQNTLSGVRIKTWQ
         FLAYNYSLGGLGKDKS ACVSNIVV+NISIQNTLSGVRIKTWQ
Subjt:  YFLAYNYSLGGLGKDKSAACVSNIVVQNISIQNTLSGVRIKTWQ

TrEMBL top hitse value%identityAlignment
A0A1S3BEF8 polygalacturonase At1g481001.1e-14984.86Show/hide
Query:  VVSLLVSSSIVRVEARKQYHSKKGKHQKQKGAGNGNGSGSAPAPLPDYNQTQSTVFNILSFGAKGNGISDDSKALLAAWKAACEIPGATLEIPSQYKFLI
        +VSLLVSSS+VRVEARKQYH KK KHQKQKG GNG+GSG APAPLP YNQ+QST+FNILSFGAKGNG+SDDSKALLAAWKAACEIPGATLEIPSQ+KFLI
Subjt:  VVSLLVSSSIVRVEARKQYHSKKGKHQKQKGAGNGNGSGSAPAPLPDYNQTQSTVFNILSFGAKGNGISDDSKALLAAWKAACEIPGATLEIPSQYKFLI

Query:  KPITLNGPCMPQLVVQIDGAVLAPPKVSTWPKSSLFQWLNFKWLHNFTIQGSGTVDGQGFNWWTLSTFYTNKKKLKHIPDMKPTALRFYSSYNVTVRDIT
        KPITLNGPCM QLV+QIDGAVLAPPKVS+WPKSSLFQWLNFKWLHNFT+QGSGTV+GQGFNWWTLSTFY NKKKLKHIPDMKPTALRFYSSYNVTVRDIT
Subjt:  KPITLNGPCMPQLVVQIDGAVLAPPKVSTWPKSSLFQWLNFKWLHNFTIQGSGTVDGQGFNWWTLSTFYTNKKKLKHIPDMKPTALRFYSSYNVTVRDIT

Query:  IINSPQCHLKFDNSGTVKVDNITISSPENSPNTDGIHLQNTQDVEIQHSNIGC-------------------DYFLAYNYSLGGLGKDKSAACVSNIVVQ
        IINSPQCHLKFDNSG VK+DNITISSPENSPNTDGIHLQNT+DVEIQHSNIGC                   +    +  SLGGLGKDKSAACVSNIVVQ
Subjt:  IINSPQCHLKFDNSGTVKVDNITISSPENSPNTDGIHLQNTQDVEIQHSNIGC-------------------DYFLAYNYSLGGLGKDKSAACVSNIVVQ

Query:  NISIQNTLSGVRIKTWQ
        NISIQNTLSGVRIKTWQ
Subjt:  NISIQNTLSGVRIKTWQ

A0A5D3CVS9 Polygalacturonase5.8e-14684.74Show/hide
Query:  IVRVEARKQYHSKKGKHQKQKGAGNGNGSGSAPAPLPDYNQTQSTVFNILSFGAKGNGISDDSKALLAAWKAACEIPGATLEIPSQYKFLIKPITLNGPC
        +VRVEARKQYH KK KHQKQKG GNG+GSG APAPLP YNQ+QST+FNILSFGAKGNG+SDDSKALLAAWKAACEIPGATLEIPSQ+KFLIKPITLNGPC
Subjt:  IVRVEARKQYHSKKGKHQKQKGAGNGNGSGSAPAPLPDYNQTQSTVFNILSFGAKGNGISDDSKALLAAWKAACEIPGATLEIPSQYKFLIKPITLNGPC

Query:  MPQLVVQIDGAVLAPPKVSTWPKSSLFQWLNFKWLHNFTIQGSGTVDGQGFNWWTLSTFYTNKKKLKHIPDMKPTALRFYSSYNVTVRDITIINSPQCHL
        M QLV+QIDGAVLAPPKVS+WPKSSLFQWLNFKWLHNFT+QGSGTV+GQGFNWWTLSTFY NKKKLKHIPDMKPTALRFYSSYNVTVRDITIINSPQCHL
Subjt:  MPQLVVQIDGAVLAPPKVSTWPKSSLFQWLNFKWLHNFTIQGSGTVDGQGFNWWTLSTFYTNKKKLKHIPDMKPTALRFYSSYNVTVRDITIINSPQCHL

Query:  KFDNSGTVKVDNITISSPENSPNTDGIHLQNTQDVEIQHSNIGC-------------------DYFLAYNYSLGGLGKDKSAACVSNIVVQNISIQNTLS
        KFDNSG VK+DNITISSPENSPNTDGIHLQNT+DVEIQHSNIGC                   +    +  SLGGLGKDKSAACVSNIVVQNISIQNTLS
Subjt:  KFDNSGTVKVDNITISSPENSPNTDGIHLQNTQDVEIQHSNIGC-------------------DYFLAYNYSLGGLGKDKSAACVSNIVVQNISIQNTLS

Query:  GVRIKTWQ
        GVRIKTWQ
Subjt:  GVRIKTWQ

A0A6J1FZB4 polygalacturonase At1g48100 isoform X11.9e-14477.39Show/hide
Query:  MKQRSKNLTLSLFLFLVVSLLVSSSIVRVEARKQYHSKKGKHQKQKGAGNGNGSGSAPAPLPDYNQTQSTVFNILSFGAKGNGISDDSKALLAAWKAACE
        M + SK LTL L     VSLLVSSS+V +EARK +H+KK KHQKQ+G G G+GS  APAPLPDYNQTQST+FNILSFGAKGNG+ DDSKAL+AAWKAAC+
Subjt:  MKQRSKNLTLSLFLFLVVSLLVSSSIVRVEARKQYHSKKGKHQKQKGAGNGNGSGSAPAPLPDYNQTQSTVFNILSFGAKGNGISDDSKALLAAWKAACE

Query:  IPGATLEIPSQYKFLIKPITLNGPCMPQLVV-QIDGAVLAPPKVSTWPKSSLFQWLNFKWLHNFTIQGSGTVDGQGFNWWTLSTFYTNKKKLKHIPDMKP
        IPGATL+IPS YKFLIKPITLNGPCMPQLV+ QIDG VLAPPKVS+W KSSLFQWLNFKWLHNFTI G GTVDGQGFNWWT+ST Y NKKK KHIPDMKP
Subjt:  IPGATLEIPSQYKFLIKPITLNGPCMPQLVV-QIDGAVLAPPKVSTWPKSSLFQWLNFKWLHNFTIQGSGTVDGQGFNWWTLSTFYTNKKKLKHIPDMKP

Query:  TALRFYSSYNVTVRDITIINSPQCHLKFDNSGTVKVDNITISSPENSPNTDGIHLQNTQDVEIQHSNIGC------------------------------
        TALRFYSSYNVTVRDITI NSPQCHLKFDNSGTVKV+NITISSPE+SPNTDGIHLQNTQDVEIQHSNIGC                              
Subjt:  TALRFYSSYNVTVRDITIINSPQCHLKFDNSGTVKVDNITISSPENSPNTDGIHLQNTQDVEIQHSNIGC------------------------------

Query:  DYFLAYNYSLGGLGKDKSAACVSNIVVQNISIQNTLSGVRIKTWQ
          FLAYNYSLGGLGKDKS ACVSNIVV+NISIQNTLSGVRIKTWQ
Subjt:  DYFLAYNYSLGGLGKDKSAACVSNIVVQNISIQNTLSGVRIKTWQ

A0A6J1FZF8 polygalacturonase At1g48100 isoform X27.6e-14677.62Show/hide
Query:  MKQRSKNLTLSLFLFLVVSLLVSSSIVRVEARKQYHSKKGKHQKQKGAGNGNGSGSAPAPLPDYNQTQSTVFNILSFGAKGNGISDDSKALLAAWKAACE
        M + SK LTL L     VSLLVSSS+V +EARK +H+KK KHQKQ+G G G+GS  APAPLPDYNQTQST+FNILSFGAKGNG+ DDSKAL+AAWKAAC+
Subjt:  MKQRSKNLTLSLFLFLVVSLLVSSSIVRVEARKQYHSKKGKHQKQKGAGNGNGSGSAPAPLPDYNQTQSTVFNILSFGAKGNGISDDSKALLAAWKAACE

Query:  IPGATLEIPSQYKFLIKPITLNGPCMPQLVVQIDGAVLAPPKVSTWPKSSLFQWLNFKWLHNFTIQGSGTVDGQGFNWWTLSTFYTNKKKLKHIPDMKPT
        IPGATL+IPS YKFLIKPITLNGPCMPQLV+QIDG VLAPPKVS+W KSSLFQWLNFKWLHNFTI G GTVDGQGFNWWT+ST Y NKKK KHIPDMKPT
Subjt:  IPGATLEIPSQYKFLIKPITLNGPCMPQLVVQIDGAVLAPPKVSTWPKSSLFQWLNFKWLHNFTIQGSGTVDGQGFNWWTLSTFYTNKKKLKHIPDMKPT

Query:  ALRFYSSYNVTVRDITIINSPQCHLKFDNSGTVKVDNITISSPENSPNTDGIHLQNTQDVEIQHSNIGC------------------------------D
        ALRFYSSYNVTVRDITI NSPQCHLKFDNSGTVKV+NITISSPE+SPNTDGIHLQNTQDVEIQHSNIGC                               
Subjt:  ALRFYSSYNVTVRDITIINSPQCHLKFDNSGTVKVDNITISSPENSPNTDGIHLQNTQDVEIQHSNIGC------------------------------D

Query:  YFLAYNYSLGGLGKDKSAACVSNIVVQNISIQNTLSGVRIKTWQ
         FLAYNYSLGGLGKDKS ACVSNIVV+NISIQNTLSGVRIKTWQ
Subjt:  YFLAYNYSLGGLGKDKSAACVSNIVVQNISIQNTLSGVRIKTWQ

A0A6J1HSE8 polygalacturonase At1g481001.0e-14278.08Show/hide
Query:  MKQRSKNLTLSLFLFLVVSLLVSSSIVRVEARKQYHSKKGKHQKQKGAGNGNGSGSAPAPLPDYNQTQSTVFNILSFGAKGNGISDDSKALLAAWKAACE
        M + SK LTL L     VSLLVSSS+V +EARK +H+KK KHQKQ+G G G+GS  APAPLPDYNQTQST+FNILSFGAKGNG+ DDSKAL+AAW AAC+
Subjt:  MKQRSKNLTLSLFLFLVVSLLVSSSIVRVEARKQYHSKKGKHQKQKGAGNGNGSGSAPAPLPDYNQTQSTVFNILSFGAKGNGISDDSKALLAAWKAACE

Query:  IPGATLEIPSQYKFLIKPITLNGPCMPQLVVQIDGAVLAPPKVSTWPKSSLFQWLNFKWLHNFTIQGSGTVDGQGFNWWTLSTFYTNKKKLKHIPDMKPT
        IPGATL+IP  YKFLIKPITLNGPCMPQLV+QIDG VLAPPKVS+W KSSLFQWLNFKWLHNFTI GSGTVDGQGFNWWT+ST Y NKKK KH+PDMKPT
Subjt:  IPGATLEIPSQYKFLIKPITLNGPCMPQLVVQIDGAVLAPPKVSTWPKSSLFQWLNFKWLHNFTIQGSGTVDGQGFNWWTLSTFYTNKKKLKHIPDMKPT

Query:  ALRFYSSYNVTVRDITIINSPQCHLKFDNSGTVKVDNITISSPENSPNTDGIHLQNTQDVEIQHSNIGC-------------------DYFLAYNYSLGG
        ALRFYSSYNVTVRDITIINSPQCHLKFDNSG VKVDNITISSPE+SPNTDGIHLQNTQDVEIQHSNIGC                   +    +  SLGG
Subjt:  ALRFYSSYNVTVRDITIINSPQCHLKFDNSGTVKVDNITISSPENSPNTDGIHLQNTQDVEIQHSNIGC-------------------DYFLAYNYSLGG

Query:  LGKDKSAACVSNIVVQNISIQNTLSGVRIKTWQ
        LGKDKS ACVSNIVV+NISIQNTLSGVRIKTWQ
Subjt:  LGKDKSAACVSNIVVQNISIQNTLSGVRIKTWQ

SwissProt top hitse value%identityAlignment
P35336 Polygalacturonase1.8e-4037.59Show/hide
Query:  STVFNILSFGAKGNGISDDSKALLAAWKAACEIPGATLEIPSQYKFLIKPITLNGPCMPQLVVQIDGAVLAPPKVSTWPKSSLFQWLNFKWLHNFTIQGS
        S   N+  FGAKG+G  DD+KA   AWKAAC    + + +  +  +L++PI+ +GPC   L +QI G + A    S + K     WL F  + N  ++G 
Subjt:  STVFNILSFGAKGNGISDDSKALLAAWKAACEIPGATLEIPSQYKFLIKPITLNGPCMPQLVVQIDGAVLAPPKVSTWPKSSLFQWLNFKWLHNFTIQGS

Query:  GTVDGQGFNWWTLSTFYTNKKKLKHIP-DMKPTALRFYSSYNVTVRDITIINSPQCHLKFDNSGTVKVDNITISSPENSPNTDGIHLQNTQDVEIQHSNI
        GT++G G  WW  S      K  K +P    PTAL FY S +V V+++ I N+ Q H+ FDN   V+  N+ +++PENSPNTDGIH+  TQ++ I    I
Subjt:  GTVDGQGFNWWTLSTFYTNKKKLKHIP-DMKPTALRFYSSYNVTVRDITIINSPQCHLKFDNSGTVKVDNITISSPENSPNTDGIHLQNTQDVEIQHSNI

Query:  G----CDYFL---------------AYNYSLGGLGKDKSAACVSNIVVQNISIQNTLSGVRIKTWQ
        G    C   +                +  S+G LG   S A VS++VV    +  T +GVRIKTWQ
Subjt:  G----CDYFL---------------AYNYSLGGLGKDKSAACVSNIVVQNISIQNTLSGVRIKTWQ

P43212 Polygalacturonase4.9e-4134.22Show/hide
Query:  VFNILSFGAKGNGISDDSKALLAAWKAACEIPGATLEIPSQYKFLIKPITLNGPCMPQLVVQIDGAVLAPPKVSTWPKSSLFQWLNFKWLHNFTIQGSGT
        +FN+  +GA G+G  D ++A   AW+AAC+ P A L +P   KF++  +  NGPC P    ++DG + A    ++W  + +  WL F  L  FT+ G G 
Subjt:  VFNILSFGAKGNGISDDSKALLAAWKAACEIPGATLEIPSQYKFLIKPITLNGPCMPQLVVQIDGAVLAPPKVSTWPKSSLFQWLNFKWLHNFTIQGSGT

Query:  VDGQGFNWWTLSTFYTNKKKLKHIPDMKPTALRFYSSYNVTVRDITIINSPQCHLKFDNSGTVKVDNITISSPENSPNTDGIHLQNTQDVEIQHSNIGC-
        +DGQG  WW     + N +++ +  D +PTA++F  S  + ++ + ++NSP+ HL F N   VK+  I+I++P +SPNTDGI +  +++  +Q + IG  
Subjt:  VDGQGFNWWTLSTFYTNKKKLKHIPDMKPTALRFYSSYNVTVRDITIINSPQCHLKFDNSGTVKVDNITISSPENSPNTDGIHLQNTQDVEIQHSNIGC-

Query:  DYFLA------------------YNYSLGGLGKDKSAACVSNIVVQNISIQNTLSGVRIKTWQ
        D  +A                  +  S+G LG++ S A VS + V      +T +G+RIKTWQ
Subjt:  DYFLA------------------YNYSLGGLGKDKSAACVSNIVVQNISIQNTLSGVRIKTWQ

Q7M1E7 Polygalacturonase2.2e-4134.72Show/hide
Query:  STVFNILSFGAKGNGISDDSKALLAAWKAACEIPGATLEIPSQYKFLIKPITLNGPCMPQLVVQIDGAVLAPPKVSTWPKSSLFQWLNFKWLHNFTIQGS
        +TVFN+  +GA G+G  D ++A    W AAC+   A L +P+  KF +  +   GPC P L  ++DG ++A P  + W  S +  WL F  L +F + G+
Subjt:  STVFNILSFGAKGNGISDDSKALLAAWKAACEIPGATLEIPSQYKFLIKPITLNGPCMPQLVVQIDGAVLAPPKVSTWPKSSLFQWLNFKWLHNFTIQGS

Query:  GTVDGQGFNWWTLSTFYTNKKKLKHIPDMKPTALRFYSSYNVTVRDITIINSPQCHLKFDNSGTVKVDNITISSPENSPNTDGIHLQNTQDVEIQHSNIG
        G +DGQG  WW       N + + +  + +PTA++   S +VTV+++T++NSP+ HL F     VK+  + I +P +SPNTDGI +  ++   I+   IG
Subjt:  GTVDGQGFNWWTLSTFYTNKKKLKHIPDMKPTALRFYSSYNVTVRDITIINSPQCHLKFDNSGTVKVDNITISSPENSPNTDGIHLQNTQDVEIQHSNIG

Query:  C-DYFLA------------------YNYSLGGLGKDKSAACVSNIVVQNISIQNTLSGVRIKTWQ
          D  +A                  +  S+G LG+D S A VS++ V      +T +G+RIKTWQ
Subjt:  C-DYFLA------------------YNYSLGGLGKDKSAACVSNIVVQNISIQNTLSGVRIKTWQ

Q949Z1 Polygalacturonase At1g481001.7e-4636.28Show/hide
Query:  LFLFLVVSLLVSSSIVRVEARKQYHSKKGKH-----------QKQKGAGNGNGSGSAPAPLPD---YNQTQSTVFNILSFGAKGNGISDDSKALLAAWKA
        + +  ++S ++      V AR +YH  KG+H              + A   +   S P P PD    +     VF++ SFGA G+G  DD+ A   AWKA
Subjt:  LFLFLVVSLLVSSSIVRVEARKQYHSKKGKH-----------QKQKGAGNGNGSGSAPAPLPD---YNQTQSTVFNILSFGAKGNGISDDSKALLAAWKA

Query:  ACEIPGATLEIPSQYKFLIKPITLNGPCMPQLVVQIDGAVLAPPKVSTWP-KSSLFQWLNFKWLHNFTIQGSGTVDGQGFNWWTL--STFYTNKKKLKHI
        AC +    +  P    F I     +GPC P LV Q+DG ++ P     WP K +  QWL F  L  FT  G GTV+G G  WW L               
Subjt:  ACEIPGATLEIPSQYKFLIKPITLNGPCMPQLVVQIDGAVLAPPKVSTWP-KSSLFQWLNFKWLHNFTIQGSGTVDGQGFNWWTL--STFYTNKKKLKHI

Query:  PDMKPTALRFYSSYNVTVRDITIINSPQCHLKFDNSGTVKVDNITISSPENSPNTDGIHLQNTQDVEIQHSNI-----------GCDYF--------LAY
        P   PT +RF+ S N+ V+ + I NSPQ H+KFD    V ++ I ISSP+ SPNTDGIHL NT+ V I +S +           GC            ++
Subjt:  PDMKPTALRFYSSYNVTVRDITIINSPQCHLKFDNSGTVKVDNITISSPENSPNTDGIHLQNTQDVEIQHSNI-----------GCDYF--------LAY

Query:  NYSLGGLGKDKSAACVSNIVVQNISIQNTLSGVRIKTWQ
          S+G LG   S ACVSNI V+N  I+++ +G+R+KTWQ
Subjt:  NYSLGGLGKDKSAACVSNIVVQNISIQNTLSGVRIKTWQ

Q94AJ5 Probable polygalacturonase At1g801701.1e-4034.96Show/hide
Query:  VFNILSFGAKGNGISDDSKALLAAWKAACEIPGAT-LEIPSQYKFLIKPITLNGPCMPQLVVQIDGAVLAPPKVSTWPKSSLFQWLNFKWLHNFTIQGSG
        + ++ +FGAKGNG++DD+KA   AWK AC     T + +P  Y  L++PI L+GPC  +L +QI G ++AP     W   +  +WL F  L   T++G G
Subjt:  VFNILSFGAKGNGISDDSKALLAAWKAACEIPGAT-LEIPSQYKFLIKPITLNGPCMPQLVVQIDGAVLAPPKVSTWPKSSLFQWLNFKWLHNFTIQGSG

Query:  TVDGQGFNWWTLSTFYTNKKKLKHIPDMKPTALRFYSSYNVTVRDITIINSPQCHLKFDNSGTVKVDNITISSPENSPNTDGIHLQNTQDV---------
        TV+G G  WW  S  + +    +      PTAL F+   N+ V ++ +I+S Q H+   +   V +  + + +P  SPNTDGIH+  ++ +         
Subjt:  TVDGQGFNWWTLSTFYTNKKKLKHIPDMKPTALRFYSSYNVTVRDITIINSPQCHLKFDNSGTVKVDNITISSPENSPNTDGIHLQNTQDV---------

Query:  ------------EIQHSNIGCDYFLAYNYSLGGLGKDKSAACVSNIVVQNISIQNTLSGVRIKTWQ
                    +I  SNI C     +  S+G LGK KS   V +I V    I +T +GVRIKTWQ
Subjt:  ------------EIQHSNIGCDYFLAYNYSLGGLGKDKSAACVSNIVVQNISIQNTLSGVRIKTWQ

Arabidopsis top hitse value%identityAlignment
AT1G10640.1 Pectin lyase-like superfamily protein5.1e-6243.14Show/hide
Query:  PAPLPDYNQTQSTVFNILSFGAKGNGISDDSKALLAAWKAACEIPGATLEIPSQYKFLIKPITLNGP-CMPQLVVQIDGAVLAPPKVSTWPKSSLFQWLN
        P PLP   Q  S VFN++ FGAKG+G  DD+KA  AAW AAC+I  + + +P +Y +L+ PI+ +GP C   +V Q+DG ++AP    TW K  L  W++
Subjt:  PAPLPDYNQTQSTVFNILSFGAKGNGISDDSKALLAAWKAACEIPGATLEIPSQYKFLIKPITLNGP-CMPQLVVQIDGAVLAPPKVSTWPKSSLFQWLN

Query:  FKWLHNFTIQGSGTVDGQGFNWWTL-STFYTNKKKL---------------------KHIPDMKPTALRFYSSYNVTVRDITIINSPQCHLKFDNSGTVK
        F  L    +QG G +DG+G  WW   S F  +  KL                     + +P +KPTALRF  S+ V V  ITI NSPQCHLKFD+   V 
Subjt:  FKWLHNFTIQGSGTVDGQGFNWWTL-STFYTNKKKL---------------------KHIPDMKPTALRFYSSYNVTVRDITIINSPQCHLKFDNSGTVK

Query:  VDNITISSPENSPNTDGIHLQNTQDVEIQHSNI-----------GCDYFLAYN--------YSLGGLGKDKSAACVSNIVVQNISIQNTLSGVRIKTWQ
        V +I +SSP +SPNTDGIHLQNT+DV I  + +           GC     +N         S+G LGK+ + ACVSNI V+++++ NT++GVRIKTWQ
Subjt:  VDNITISSPENSPNTDGIHLQNTQDVEIQHSNI-----------GCDYFLAYN--------YSLGGLGKDKSAACVSNIVVQNISIQNTLSGVRIKTWQ

AT1G56710.1 Pectin lyase-like superfamily protein4.8e-5240.42Show/hide
Query:  APAPLPDYNQTQS---TVFNILSFGAKGNGISDDSKALLAAWKAACEIPG---ATLEIPSQYKFLIKPITLNGPCMPQLVVQIDGAVLAPPKVSTWPKSS
        +PAP P YN   +   TVF++ SFGA G+  +DD+ A   AW AAC   G   A L +P  + FL+KP T NGPC   LV+QIDG +++P    +WP + 
Subjt:  APAPLPDYNQTQS---TVFNILSFGAKGNGISDDSKALLAAWKAACEIPG---ATLEIPSQYKFLIKPITLNGPCMPQLVVQIDGAVLAPPKVSTWPKSS

Query:  LFQWLNFKWLHNFTIQGSGTVDGQGFNWWTLSTFYTNKKKLKHI----PDMKPTALRFYSSYNVTVRDITIINSPQCHLKFDNSGTVKVDNITISSPENS
          QW+ F  ++  +IQGSG ++G+G  WW L       K L       P   P A+R + S  V ++ I  +NS Q H++FDN   V VD++ I +P +S
Subjt:  LFQWLNFKWLHNFTIQGSGTVDGQGFNWWTLSTFYTNKKKLKHI----PDMKPTALRFYSSYNVTVRDITIINSPQCHLKFDNSGTVKVDNITISSPENS

Query:  PNTDGIHLQNTQDVEIQHS---------NIGCDYF----------LAYNYSLGGLGKDKSAACVSNIVVQNISIQNTLSGVRIKTWQ
        PNTDGIH++NT +V+I++S         +IG   F           ++  S+G LG   S A VSNI V N +I N+ +GVRIKTWQ
Subjt:  PNTDGIHLQNTQDVEIQHS---------NIGCDYF----------LAYNYSLGGLGKDKSAACVSNIVVQNISIQNTLSGVRIKTWQ

AT1G60590.1 Pectin lyase-like superfamily protein3.0e-6243.05Show/hide
Query:  PAPLPDYNQTQSTVFNILSFGAKGNGISDDSKALLAAWKAACEIPGATLEIPSQYKFLIKPITLNGP-CMPQLVVQIDGAVLAPPKVSTWPKSSLFQWLN
        P PLP      S  FN+L FGAKG+G+SDD++A  AAW +AC++  +T+ IP  Y FL+ PI+ +GP C   +V Q++G ++AP    +W    L  W+ 
Subjt:  PAPLPDYNQTQSTVFNILSFGAKGNGISDDSKALLAAWKAACEIPGATLEIPSQYKFLIKPITLNGP-CMPQLVVQIDGAVLAPPKVSTWPKSSLFQWLN

Query:  FKWLHNFTIQGSGTVDGQGFNWWT---LSTFYTN---------------------KKKLK-HIPDMKPTALRFYSSYNVTVRDITIINSPQCHLKFDNSG
        F  L   TIQG+G +DG+G  WW    LS +  +                     + +L   +P +KPTALRFY S +VTV  ITI NSPQCHLKFDN  
Subjt:  FKWLHNFTIQGSGTVDGQGFNWWT---LSTFYTN---------------------KKKLK-HIPDMKPTALRFYSSYNVTVRDITIINSPQCHLKFDNSG

Query:  TVKVDNITISSPENSPNTDGIHLQNTQDVEIQHSNI-----------GCDYFLAYN--------YSLGGLGKDKSAACVSNIVVQNISIQNTLSGVRIKT
         V V ++ +SSP +SPNTDGIHLQNT+DV I  + +           GC     +N         S+G LGKD + ACVSNI V+++ + NT++GVRIKT
Subjt:  TVKVDNITISSPENSPNTDGIHLQNTQDVEIQHSNI-----------GCDYFLAYN--------YSLGGLGKDKSAACVSNIVVQNISIQNTLSGVRIKT

Query:  WQ
        WQ
Subjt:  WQ

AT3G26610.1 Pectin lyase-like superfamily protein3.6e-10057.01Show/hide
Query:  KNLTLSLFLFLVVSLLVSSSIVRVEARKQYHSKKGKHQKQKGAGNGNGSGSAPAPLPDYNQTQSTVFNILSFGAKGNGISDDSKALLAAWKAACEIPGAT
        K+L +   L  V+ +  + S V VE RK +H KK K + ++ + N      APAP P  N+    VFNI S+GAKG+G+SDDSKAL+ AWKAAC++ G  
Subjt:  KNLTLSLFLFLVVSLLVSSSIVRVEARKQYHSKKGKHQKQKGAGNGNGSGSAPAPLPDYNQTQSTVFNILSFGAKGNGISDDSKALLAAWKAACEIPGAT

Query:  LEIPSQYKFLIKPITLNGPCMPQLVVQIDGAVLAPPKVSTWPKSSLFQWLNFKWLHNFTIQGSGTVDGQGFNWWTLSTFYTNKKKLKHIPDMKPTALRFY
        +EIP+  +FL+K +TL GPC  + VVQI+G ++AP K+ +WP SSLFQWLNFKW+ + TIQGSGT++G+G+NWW L T+ T  +  K+IP MKPTALRFY
Subjt:  LEIPSQYKFLIKPITLNGPCMPQLVVQIDGAVLAPPKVSTWPKSSLFQWLNFKWLHNFTIQGSGTVDGQGFNWWTLSTFYTNKKKLKHIPDMKPTALRFY

Query:  SSYNVTVRDITIINSPQCHLKFDNSGTVKVDNITISSPENSPNTDGIHLQNTQDVEIQHSNIGC-------------------DYFLAYNYSLGGLGKDK
        SS NVTVRDI+I+NSP CHLKFD+S  VKV+NITISSPENSPNTDGIHLQNT++VEIQHSNI C                   +    +  S+GGLGKDK
Subjt:  SSYNVTVRDITIINSPQCHLKFDNSGTVKVDNITISSPENSPNTDGIHLQNTQDVEIQHSNIGC-------------------DYFLAYNYSLGGLGKDK

Query:  SAACVSNIVVQNISIQNTLSGVRIKTWQ
        S ACVS+I+V++ISIQNTL+GVRIKTWQ
Subjt:  SAACVSNIVVQNISIQNTLSGVRIKTWQ

AT5G14650.1 Pectin lyase-like superfamily protein2.0e-5840.62Show/hide
Query:  LSLFLFLVVSLLVSSSIVRVEARKQYHSKKGKHQKQKGAGNGNGSGSAPAPLPDYNQTQSTVFNILSFGAKGNGISDDSKALLAAWKAACEIPGATLEIP
        LSL   L++SL  SS     +AR   + K  +    +G  +G                     N+L  GAKG+G SDD+KA   AW+ AC++  +TL +P
Subjt:  LSLFLFLVVSLLVSSSIVRVEARKQYHSKKGKHQKQKGAGNGNGSGSAPAPLPDYNQTQSTVFNILSFGAKGNGISDDSKALLAAWKAACEIPGATLEIP

Query:  SQYKFLIKPITLNG-PCMPQLVVQIDGAVLAPPKVSTWPKSSLFQWLNFKWLHNFTIQGSGTVDGQGFNWWTLSTFYTNKKKLKHIPDMKPTALRFYSSY
        S   FL+ P++  G  C  ++V Q++G ++AP   S W  S L QW+ FK L   TI+G G +DG+G  WW       N      +P  KPTALRFY S 
Subjt:  SQYKFLIKPITLNG-PCMPQLVVQIDGAVLAPPKVSTWPKSSLFQWLNFKWLHNFTIQGSGTVDGQGFNWWTLSTFYTNKKKLKHIPDMKPTALRFYSSY

Query:  NVTVRDITIINSPQCHLKFDNSGTVKVDNITISSPENSPNTDGIHLQNTQDVEIQHSNIGC-------------------DYFLAYNYSLGGLGKDKSAA
         VTV  ITI NSPQ HLKFDN  +++V + T SSP +SPNTDGIHLQN+QD  I  S + C                   D    +  S+GGLGKD + A
Subjt:  NVTVRDITIINSPQCHLKFDNSGTVKVDNITISSPENSPNTDGIHLQNTQDVEIQHSNIGC-------------------DYFLAYNYSLGGLGKDKSAA

Query:  CVSNIVVQNISIQNTLSGVRIKTWQ
        CVSNI V+++++  T +GVRIK+WQ
Subjt:  CVSNIVVQNISIQNTLSGVRIKTWQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAACAAAGAAGCAAGAATTTAACTCTTTCACTGTTTCTGTTTTTGGTGGTCTCTTTGCTGGTGTCTTCTTCTATAGTTAGAGTGGAGGCAAGGAAGCAATATCACAG
CAAGAAGGGCAAGCATCAGAAGCAAAAGGGTGCTGGCAATGGCAATGGTTCAGGCTCTGCACCAGCTCCACTTCCTGATTACAATCAAACTCAGTCCACCGTTTTTAATA
TCTTGTCTTTTGGAGCAAAGGGCAATGGAATTTCTGATGATTCCAAGGCCCTTCTAGCAGCATGGAAAGCTGCATGCGAGATTCCAGGAGCTACATTGGAAATACCATCA
CAATACAAGTTTCTTATCAAACCCATAACTCTAAATGGCCCTTGTATGCCTCAGCTCGTTGTTCAGATTGATGGAGCTGTATTGGCGCCTCCAAAAGTAAGTACGTGGCC
CAAATCCAGCTTGTTTCAATGGCTGAATTTCAAATGGCTACATAACTTCACCATTCAAGGCTCTGGTACTGTGGATGGCCAAGGCTTTAATTGGTGGACTCTCTCCACAT
TCTACACTAACAAAAAGAAATTGAAGCACATTCCAGATATGAAGCCTACTGCTTTAAGATTTTATTCCAGTTATAATGTGACAGTTCGTGACATCACCATAATAAACAGT
CCACAGTGCCATCTGAAATTTGACAACTCCGGCACCGTCAAAGTTGACAATATCACCATTTCTTCGCCGGAGAACAGCCCCAACACCGACGGCATTCACCTGCAGAACAC
ACAAGATGTCGAGATTCAACACTCCAACATTGGCTGTGATTATTTTCTTGCCTATAATTACAGCTTGGGCGGACTTGGGAAAGATAAAAGTGCTGCATGTGTCTCCAATA
TTGTTGTCCAAAACATCTCAATTCAAAACACTCTTTCAGGAGTGAGAATCAAGACCTGGCAGGTAAAAGAAAAAGGGTTAAAGTTAAACTACTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAACAAAGAAGCAAGAATTTAACTCTTTCACTGTTTCTGTTTTTGGTGGTCTCTTTGCTGGTGTCTTCTTCTATAGTTAGAGTGGAGGCAAGGAAGCAATATCACAG
CAAGAAGGGCAAGCATCAGAAGCAAAAGGGTGCTGGCAATGGCAATGGTTCAGGCTCTGCACCAGCTCCACTTCCTGATTACAATCAAACTCAGTCCACCGTTTTTAATA
TCTTGTCTTTTGGAGCAAAGGGCAATGGAATTTCTGATGATTCCAAGGCCCTTCTAGCAGCATGGAAAGCTGCATGCGAGATTCCAGGAGCTACATTGGAAATACCATCA
CAATACAAGTTTCTTATCAAACCCATAACTCTAAATGGCCCTTGTATGCCTCAGCTCGTTGTTCAGATTGATGGAGCTGTATTGGCGCCTCCAAAAGTAAGTACGTGGCC
CAAATCCAGCTTGTTTCAATGGCTGAATTTCAAATGGCTACATAACTTCACCATTCAAGGCTCTGGTACTGTGGATGGCCAAGGCTTTAATTGGTGGACTCTCTCCACAT
TCTACACTAACAAAAAGAAATTGAAGCACATTCCAGATATGAAGCCTACTGCTTTAAGATTTTATTCCAGTTATAATGTGACAGTTCGTGACATCACCATAATAAACAGT
CCACAGTGCCATCTGAAATTTGACAACTCCGGCACCGTCAAAGTTGACAATATCACCATTTCTTCGCCGGAGAACAGCCCCAACACCGACGGCATTCACCTGCAGAACAC
ACAAGATGTCGAGATTCAACACTCCAACATTGGCTGTGATTATTTTCTTGCCTATAATTACAGCTTGGGCGGACTTGGGAAAGATAAAAGTGCTGCATGTGTCTCCAATA
TTGTTGTCCAAAACATCTCAATTCAAAACACTCTTTCAGGAGTGAGAATCAAGACCTGGCAGGTAAAAGAAAAAGGGTTAAAGTTAAACTACTAA
Protein sequenceShow/hide protein sequence
MKQRSKNLTLSLFLFLVVSLLVSSSIVRVEARKQYHSKKGKHQKQKGAGNGNGSGSAPAPLPDYNQTQSTVFNILSFGAKGNGISDDSKALLAAWKAACEIPGATLEIPS
QYKFLIKPITLNGPCMPQLVVQIDGAVLAPPKVSTWPKSSLFQWLNFKWLHNFTIQGSGTVDGQGFNWWTLSTFYTNKKKLKHIPDMKPTALRFYSSYNVTVRDITIINS
PQCHLKFDNSGTVKVDNITISSPENSPNTDGIHLQNTQDVEIQHSNIGCDYFLAYNYSLGGLGKDKSAACVSNIVVQNISIQNTLSGVRIKTWQVKEKGLKLNY