CuGenDBv2

Gene ID	HG10015254
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	NAD(P)H-quinone oxidoreductase subunit H, chloroplastic
Genome location	Chr02:25199699..25200100
RNA-Seq Expression	HG10015254
Synteny	HG10015254
Gene Ontology terms	GO:0019684 - photosynthesis, light reaction (biological process) GO:0009535 - chloroplast thylakoid membrane (cellular component) GO:0016655 - oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor (molecular function) GO:0048038 - quinone binding (molecular function) GO:0051287 - NAD binding (molecular function)
InterPro domains	IPR014029 - NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site IPR022885 - NAD(P)H-quinone oxidoreductase subunit D/H IPR029014 - [NiFe]-hydrogenase, large subunit

Homology

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GenBank top hits

e value

%identity

Alignment

YP_004841841.1 NADH-plastoquinone oxidoreductase subunit 7 [Cucumis melo subsp. melo]

3.1e-47

82.76

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Query:  MNGPATRKDLMIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNSQL-YQSNY
        MNGPATRKDLMIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGN Q+  +++Y
Subjt:  MNGPATRKDLMIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNSQL-YQSNY

Query:  VGVESYSFSSVMAKML
        + V     S + + +L
Subjt:  VGVESYSFSSVMAKML

YP_009317442.1 NADH dehydrogenase subunit 7 [Coccinia grandis]

3.1e-47

82.76

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Query:  MNGPATRKDLMIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNSQL-YQSNY
        MNGPATRKDLMIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGN Q+  +++Y
Subjt:  MNGPATRKDLMIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNSQL-YQSNY

Query:  VGVESYSFSSVMAKML
        + V     S + + +L
Subjt:  VGVESYSFSSVMAKML

YP_009420851.1 NADH dehydrogenase subunit 7 [Citrullus colocynthis]

3.1e-47

82.76

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Query:  MNGPATRKDLMIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNSQL-YQSNY
        MNGPATRKDLMIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGN Q+  +++Y
Subjt:  MNGPATRKDLMIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNSQL-YQSNY

Query:  VGVESYSFSSVMAKML
        + V     S + + +L
Subjt:  VGVESYSFSSVMAKML

YP_009456118.1 NADH dehydrogenase subunit 7 [Momordica charantia]

3.1e-47

82.76

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Query:  MNGPATRKDLMIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNSQL-YQSNY
        MNGPATRKDLMIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGN Q+  +++Y
Subjt:  MNGPATRKDLMIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNSQL-YQSNY

Query:  VGVESYSFSSVMAKML
        + V     S + + +L
Subjt:  VGVESYSFSSVMAKML

YP_009752130.1 NADH dehydrogenase subunit H [Dendrosicyos socotranus]

3.1e-47

82.76

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Query:  MNGPATRKDLMIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNSQL-YQSNY
        MNGPATRKDLMIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGN Q+  +++Y
Subjt:  MNGPATRKDLMIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNSQL-YQSNY

Query:  VGVESYSFSSVMAKML
        + V     S + + +L
Subjt:  VGVESYSFSSVMAKML

TrEMBL top hits

e value

%identity

Alignment

A0A1S4EU61 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic

1.5e-47

82.76

Show/hide

Query:  MNGPATRKDLMIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNSQL-YQSNY
        MNGPATRKDLMIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGN Q+  +++Y
Subjt:  MNGPATRKDLMIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNSQL-YQSNY

Query:  VGVESYSFSSVMAKML
        + V     S + + +L
Subjt:  VGVESYSFSSVMAKML

A0A1X9Q1R4 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic

1.5e-47

82.76

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Query:  MNGPATRKDLMIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNSQL-YQSNY
        MNGPATRKDLMIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGN Q+  +++Y
Subjt:  MNGPATRKDLMIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNSQL-YQSNY

Query:  VGVESYSFSSVMAKML
        + V     S + + +L
Subjt:  VGVESYSFSSVMAKML

A0A218KGA7 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic

1.5e-47

82.76

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Query:  MNGPATRKDLMIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNSQL-YQSNY
        MNGPATRKDLMIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGN Q+  +++Y
Subjt:  MNGPATRKDLMIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNSQL-YQSNY

Query:  VGVESYSFSSVMAKML
        + V     S + + +L
Subjt:  VGVESYSFSSVMAKML

A0A249RZD9 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic

1.5e-47

82.76

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Query:  MNGPATRKDLMIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNSQL-YQSNY
        MNGPATRKDLMIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGN Q+  +++Y
Subjt:  MNGPATRKDLMIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNSQL-YQSNY

Query:  VGVESYSFSSVMAKML
        + V     S + + +L
Subjt:  VGVESYSFSSVMAKML

G3ETV5 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic

1.5e-47

82.76

Show/hide

Query:  MNGPATRKDLMIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNSQL-YQSNY
        MNGPATRKDLMIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGN Q+  +++Y
Subjt:  MNGPATRKDLMIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNSQL-YQSNY

Query:  VGVESYSFSSVMAKML
        + V     S + + +L
Subjt:  VGVESYSFSSVMAKML

SwissProt top hits

e value

%identity

Alignment

A4GYX2 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic

4.9e-48

79.31

Show/hide

Query:  MNGPATRKDLMIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNSQL-YQSNY
        MN PATRKD MIVNMGPHHPSMHGVLRLIL+LDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAIT+NGPEQLGN Q+  +++Y
Subjt:  MNGPATRKDLMIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNSQL-YQSNY

Query:  VGVESYSFSSVMAKML
        + V     S + + +L
Subjt:  VGVESYSFSSVMAKML

Q14FA2 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic

4.9e-48

79.31

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Query:  MNGPATRKDLMIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNSQL-YQSNY
        MN PATRKD MIVNMGPHHPSMHGVLRLIL+LDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAIT+NGPEQLGN Q+  +++Y
Subjt:  MNGPATRKDLMIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNSQL-YQSNY

Query:  VGVESYSFSSVMAKML
        + V     S + + +L
Subjt:  VGVESYSFSSVMAKML

Q332S1 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic

2.2e-48

80.17

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Query:  MNGPATRKDLMIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNSQL-YQSNY
        M GPATRKDLMIVNMGPHHPSMHGVLRLI+TLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVN PEQLGN Q+  +++Y
Subjt:  MNGPATRKDLMIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNSQL-YQSNY

Query:  VGVESYSFSSVMAKML
        + V     S + + +L
Subjt:  VGVESYSFSSVMAKML

Q4VZL2 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic

4.0e-50

82.76

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Query:  MNGPATRKDLMIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNSQL-YQSNY
        MNGPATRKDLMIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGN Q+  +++Y
Subjt:  MNGPATRKDLMIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNSQL-YQSNY

Query:  VGVESYSFSSVMAKML
        + V     S + + +L
Subjt:  VGVESYSFSSVMAKML

Q9BBN8 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic

9.9e-49

81.03

Show/hide

Query:  MNGPATRKDLMIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNSQL-YQSNY
        MN PATRKDLMIVNMGPHHPSMHGVLRLI+TLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGN Q+  +++Y
Subjt:  MNGPATRKDLMIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNSQL-YQSNY

Query:  VGVESYSFSSVMAKML
        + V     S + + +L
Subjt:  VGVESYSFSSVMAKML

Arabidopsis top hits

e value

%identity

Alignment

ATCG01110.1 NAD(P)H dehydrogenase subunit H

2.5e-47

76.72

Show/hide

Query:  MNGPATRKDLMIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNSQL-YQSNY
        M  P T KDLMIVNMGPHHPSMHGVLRLI+TLDGEDV+DCEPILGYLHRGMEKIAENR IIQYLPYVTRWDYLATMFTEAITVNGPEQLGN Q+  +++Y
Subjt:  MNGPATRKDLMIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNSQL-YQSNY

Query:  VGVESYSFSSVMAKML
        + V     S + + +L
Subjt:  VGVESYSFSSVMAKML

ATMG00510.1 NADH dehydrogenase subunit 7

1.3e-14

43.33

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Query:  NMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNSQL-YQSNYVGV
        N GP HP+ HGV RL+L ++GE V   EP +G LHRG EK+ E +T +Q LPY  R DY++ M  E    +  E+L N ++  ++ Y+ V
Subjt:  NMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNSQL-YQSNYVGV

Sequences

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CDS sequence

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ATGAATGGACCAGCTACAAGAAAAGACCTCATGATAGTCAATATGGGACCTCACCACCCATCAATGCACGGTGTTCTTCGACTCATCCTTACTTTGGATGGTGAAGATGT
TATTGACTGTGAACCAATATTGGGTTATTTACACAGAGGGATGGAAAAAATTGCAGAAAACCGAACAATTATACAATATCTACCTTATGTAACACGTTGGGATTATTTAG
CTACTATGTTTACAGAAGCAATAACCGTAAATGGTCCAGAACAGTTGGGAAATAGCCAGCTATATCAGAGTAATTATGTTGGAGTTGAGTCGTATAGCTTCTCATCTGTT
ATGGCCAAGATGCTGAACAACAAAGTTTTATTTTGGAAAAACACCATCATTATGGAAACGTACACGCAGTAG

mRNA sequence

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Protein sequence

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MNGPATRKDLMIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNSQLYQSNYVGVESYSFSSV
MAKMLNNKVLFWKNTIIMETYTQ

HG10015254 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome