; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10015332 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10015332
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description40S ribosomal protein S9-2
Genome locationChr02:25891684..25893600
RNA-Seq ExpressionHG10015332
SyntenyHG10015332
Gene Ontology termsGO:0045903 - positive regulation of translational fidelity (biological process)
GO:0022627 - cytosolic small ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0019843 - rRNA binding (molecular function)
InterPro domainsIPR001912 - Ribosomal protein S4/S9, N-terminal
IPR022801 - Ribosomal protein S4/S9


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EXB49964.1 40S ribosomal protein S9-2 [Morus notabilis]4.7e-5970.74Show/hide
Query:  DGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARMLLTLDEKNPRRIFEGEALLRRMN--------------------------
        DGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARMLLTLDEKNPRRIFEGEALLRRMN                          
Subjt:  DGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARMLLTLDEKNPRRIFEGEALLRRMN--------------------------

Query:  ---------------------------RVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKEKNQKAAAKKAAGGDGDEEDED
                                   RVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVK +NQKAAAKKAAGGDGDEEDED
Subjt:  ---------------------------RVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKEKNQKAAAKKAAGGDGDEEDED

KAE8662652.1 40S ribosomal protein S9-2 [Hibiscus syriacus]1.6e-5991.04Show/hide
Query:  GKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARMLLTLDEKNPRRIFEGEALLRRMNRVGRQVVNIPSFMVRVDSQKHIDFSLT
        GKTFKKPRRPYEK+RLDAEL+ VGEYGLRC RELWRVQYALSRIRN AR LLTLDEKNPRRIFEGEALLRRMNRVGRQVVNIPSFMVRVDSQKHIDFSLT
Subjt:  GKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARMLLTLDEKNPRRIFEGEALLRRMNRVGRQVVNIPSFMVRVDSQKHIDFSLT

Query:  SPFGGGRPGRVKEKNQKAAAKKAAGGDGDEEDED
        SPFG GRPGRVK +NQ+AAAKKA GGDGDEEDE+
Subjt:  SPFGGGRPGRVKEKNQKAAAKKAAGGDGDEEDED

KAG7025173.1 40S ribosomal protein S9-2 [Cucurbita argyrosperma subsp. argyrosperma]2.1e-5971.28Show/hide
Query:  DGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARMLLTLDEKNPRRIFEGEALLRRMN--------------------------
        DGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARMLLTLDEKNPRRIFEGEALLRRMN                          
Subjt:  DGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARMLLTLDEKNPRRIFEGEALLRRMN--------------------------

Query:  ---------------------------RVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKEKNQKAAAKKAAGGDGDEEDED
                                   RVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVK KNQKAAAKKAAGGDGDEEDED
Subjt:  ---------------------------RVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKEKNQKAAAKKAAGGDGDEEDED

KJB70959.1 hypothetical protein B456_011G097500 [Gossypium raimondii]5.9e-6293.28Show/hide
Query:  GKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARMLLTLDEKNPRRIFEGEALLRRMNRVGRQVVNIPSFMVRVDSQKHIDFSLT
        GKTFKKPRRPYEKERLDAEL+LVGEYGLRCKRELWRVQYALSRIRN AR LLTLDEKNPRRIFEGEALLRRMNRVGRQVVNIPSFMVRVDSQKHIDFSLT
Subjt:  GKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARMLLTLDEKNPRRIFEGEALLRRMNRVGRQVVNIPSFMVRVDSQKHIDFSLT

Query:  SPFGGGRPGRVKEKNQKAAAKKAAGGDGDEEDED
        SPFGGGRPGRVK KNQ+AAAKKAAGGDGD+E+++
Subjt:  SPFGGGRPGRVKEKNQKAAAKKAAGGDGDEEDED

PON57336.1 Ribosomal protein [Parasponia andersonii]4.7e-5970.74Show/hide
Query:  DGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARMLLTLDEKNPRRIFEGEALLRRMN--------------------------
        DGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARMLLTLDEKNPRRIFEGEALLRRMN                          
Subjt:  DGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARMLLTLDEKNPRRIFEGEALLRRMN--------------------------

Query:  ---------------------------RVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKEKNQKAAAKKAAGGDGDEEDED
                                   RVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVK +NQKAAAKKAAGGDGDEEDED
Subjt:  ---------------------------RVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKEKNQKAAAKKAAGGDGDEEDED

TrEMBL top hitse value%identityAlignment
A0A0D2UQT2 Ribosomal_S4 domain-containing protein2.9e-6293.28Show/hide
Query:  GKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARMLLTLDEKNPRRIFEGEALLRRMNRVGRQVVNIPSFMVRVDSQKHIDFSLT
        GKTFKKPRRPYEKERLDAEL+LVGEYGLRCKRELWRVQYALSRIRN AR LLTLDEKNPRRIFEGEALLRRMNRVGRQVVNIPSFMVRVDSQKHIDFSLT
Subjt:  GKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARMLLTLDEKNPRRIFEGEALLRRMNRVGRQVVNIPSFMVRVDSQKHIDFSLT

Query:  SPFGGGRPGRVKEKNQKAAAKKAAGGDGDEEDED
        SPFGGGRPGRVK KNQ+AAAKKAAGGDGD+E+++
Subjt:  SPFGGGRPGRVKEKNQKAAAKKAAGGDGDEEDED

A0A2P5C8D5 Ribosomal protein2.3e-5970.74Show/hide
Query:  DGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARMLLTLDEKNPRRIFEGEALLRRMN--------------------------
        DGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARMLLTLDEKNPRRIFEGEALLRRMN                          
Subjt:  DGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARMLLTLDEKNPRRIFEGEALLRRMN--------------------------

Query:  ---------------------------RVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKEKNQKAAAKKAAGGDGDEEDED
                                   RVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVK +NQKAAAKKAAGGDGDEEDED
Subjt:  ---------------------------RVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKEKNQKAAAKKAAGGDGDEEDED

A0A2P5F757 Ribosomal protein2.3e-5970.74Show/hide
Query:  DGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARMLLTLDEKNPRRIFEGEALLRRMN--------------------------
        DGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARMLLTLDEKNPRRIFEGEALLRRMN                          
Subjt:  DGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARMLLTLDEKNPRRIFEGEALLRRMN--------------------------

Query:  ---------------------------RVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKEKNQKAAAKKAAGGDGDEEDED
                                   RVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVK +NQKAAAKKAAGGDGDEEDED
Subjt:  ---------------------------RVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKEKNQKAAAKKAAGGDGDEEDED

A0A6A2WPI7 40S ribosomal protein S9-27.8e-6091.04Show/hide
Query:  GKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARMLLTLDEKNPRRIFEGEALLRRMNRVGRQVVNIPSFMVRVDSQKHIDFSLT
        GKTFKKPRRPYEK+RLDAEL+ VGEYGLRC RELWRVQYALSRIRN AR LLTLDEKNPRRIFEGEALLRRMNRVGRQVVNIPSFMVRVDSQKHIDFSLT
Subjt:  GKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARMLLTLDEKNPRRIFEGEALLRRMNRVGRQVVNIPSFMVRVDSQKHIDFSLT

Query:  SPFGGGRPGRVKEKNQKAAAKKAAGGDGDEEDED
        SPFG GRPGRVK +NQ+AAAKKA GGDGDEEDE+
Subjt:  SPFGGGRPGRVKEKNQKAAAKKAAGGDGDEEDED

W9QQ56 40S ribosomal protein S9-22.3e-5970.74Show/hide
Query:  DGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARMLLTLDEKNPRRIFEGEALLRRMN--------------------------
        DGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARMLLTLDEKNPRRIFEGEALLRRMN                          
Subjt:  DGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARMLLTLDEKNPRRIFEGEALLRRMN--------------------------

Query:  ---------------------------RVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKEKNQKAAAKKAAGGDGDEEDED
                                   RVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVK +NQKAAAKKAAGGDGDEEDED
Subjt:  ---------------------------RVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKEKNQKAAAKKAAGGDGDEEDED

SwissProt top hitse value%identityAlignment
A6QLG5 40S ribosomal protein S91.6e-3850Show/hide
Query:  KTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARMLLTLDEKNPRRIFEGEALLRRMNRVG-------------------------
        KT+  PRRP+EK RLD ELKL+GEYGLR KRE+WRV++ L++IR  AR LLTLDEK+PRR+FEG ALLRR+ R+G                         
Subjt:  KTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARMLLTLDEKNPRRIFEGEALLRRMNRVG-------------------------

Query:  ----------------------------RQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKEKNQKAAAKKAAGGDGDEED
                                    +QVVNIPSF+VR+DSQKHIDFSL SP+GGGRPGRVK KN K     A  GD +EED
Subjt:  ----------------------------RQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKEKNQKAAAKKAAGGDGDEED

P46781 40S ribosomal protein S91.6e-3850Show/hide
Query:  KTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARMLLTLDEKNPRRIFEGEALLRRMNRVG-------------------------
        KT+  PRRP+EK RLD ELKL+GEYGLR KRE+WRV++ L++IR  AR LLTLDEK+PRR+FEG ALLRR+ R+G                         
Subjt:  KTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARMLLTLDEKNPRRIFEGEALLRRMNRVG-------------------------

Query:  ----------------------------RQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKEKNQKAAAKKAAGGDGDEED
                                    +QVVNIPSF+VR+DSQKHIDFSL SP+GGGRPGRVK KN K     A  GD +EED
Subjt:  ----------------------------RQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKEKNQKAAAKKAAGGDGDEED

Q6ZWN5 40S ribosomal protein S91.6e-3850Show/hide
Query:  KTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARMLLTLDEKNPRRIFEGEALLRRMNRVG-------------------------
        KT+  PRRP+EK RLD ELKL+GEYGLR KRE+WRV++ L++IR  AR LLTLDEK+PRR+FEG ALLRR+ R+G                         
Subjt:  KTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARMLLTLDEKNPRRIFEGEALLRRMNRVG-------------------------

Query:  ----------------------------RQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKEKNQKAAAKKAAGGDGDEED
                                    +QVVNIPSF+VR+DSQKHIDFSL SP+GGGRPGRVK KN K     A  GD +EED
Subjt:  ----------------------------RQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKEKNQKAAAKKAAGGDGDEED

Q9FLF0 40S ribosomal protein S9-28.6e-5664.17Show/hide
Query:  GKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARMLLTLDEKNPRRIFEGEALLRRMN---------------------------
        GKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQY LSRIRN AR LLTLDEKNPRRIFEGEALLRRMN                           
Subjt:  GKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARMLLTLDEKNPRRIFEGEALLRRMN---------------------------

Query:  --------------------------RVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKEKNQKAAAKKAAGGDGDEEDED
                                  RVGRQ+VNIPSFMVRV+SQKH+DFSLTSPFGGGRPGRVK +N++A AKKA+GGDGDE+DE+
Subjt:  --------------------------RVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKEKNQKAAAKKAAGGDGDEEDED

Q9LXG1 40S ribosomal protein S9-19.2e-5060.11Show/hide
Query:  GKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARMLLTLDEKNPRRIFEGEALLRRMN---------------------------
        GKTFK PRRPYEKERLD+ELKLVGEYGLR KRELWRVQY+LSRIRN AR LLTLDEK+PRRIFEGEALLRRMN                           
Subjt:  GKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARMLLTLDEKNPRRIFEGEALLRRMN---------------------------

Query:  --------------------------RVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKEKNQKAAAKKAAGG---DGDEED
                                  RVG+Q+VNIPSFMVR+DSQKHIDF+LTSPFGGGRPGRVK +N+K+A+KKA+GG   DGD+E+
Subjt:  --------------------------RVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKEKNQKAAAKKAAGG---DGDEED

Arabidopsis top hitse value%identityAlignment
AT5G15200.1 Ribosomal protein S46.5e-5160.11Show/hide
Query:  GKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARMLLTLDEKNPRRIFEGEALLRRMN---------------------------
        GKTFK PRRPYEKERLD+ELKLVGEYGLR KRELWRVQY+LSRIRN AR LLTLDEK+PRRIFEGEALLRRMN                           
Subjt:  GKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARMLLTLDEKNPRRIFEGEALLRRMN---------------------------

Query:  --------------------------RVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKEKNQKAAAKKAAGG---DGDEED
                                  RVG+Q+VNIPSFMVR+DSQKHIDF+LTSPFGGGRPGRVK +N+K+A+KKA+GG   DGD+E+
Subjt:  --------------------------RVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKEKNQKAAAKKAAGG---DGDEED

AT5G15200.2 Ribosomal protein S45.2e-3289.47Show/hide
Query:  GKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARMLLTLDEKNPRRIFEGEALLRRMNRVG
        GKTFK PRRPYEKERLD+ELKLVGEYGLR KRELWRVQY+LSRIRN AR LLTLDEK+PRRIFEGEALLRRMNR G
Subjt:  GKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARMLLTLDEKNPRRIFEGEALLRRMNRVG

AT5G39850.1 Ribosomal protein S46.1e-5764.17Show/hide
Query:  GKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARMLLTLDEKNPRRIFEGEALLRRMN---------------------------
        GKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQY LSRIRN AR LLTLDEKNPRRIFEGEALLRRMN                           
Subjt:  GKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARMLLTLDEKNPRRIFEGEALLRRMN---------------------------

Query:  --------------------------RVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKEKNQKAAAKKAAGGDGDEEDED
                                  RVGRQ+VNIPSFMVRV+SQKH+DFSLTSPFGGGRPGRVK +N++A AKKA+GGDGDE+DE+
Subjt:  --------------------------RVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKEKNQKAAAKKAAGGDGDEEDED


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCTTTTTCTGCAAAGCCCATATGTTAATTGGGCCGTCACTCACTTCATCCAGAGCTGCGCCTAGGGCTCTGCCTCACCACAAGCAAGGGTTTTTAAGAAGTCATAT
AAATGCACCACAAACCCTCCCTCCATTTCGGCGCTTCTTTGTTTTCGTGATTAGGGCTTCCGATCGAGAGGGCGGCAGGGCTGGGAGTGAAGCCGTAGCAGAGAACCAAT
CATGTTTTTTTGGATTTTCTATTTCTCTTGTGCTTTTCTTCCGCTTATGTTGTTTCGCACATGATAGGCTATTTGATGGAAAAACTTTCAAGAAACCTCGACGACCTTAC
GAGAAGGAGCGTCTGGATGCAGAACTTAAACTTGTAGGTGAATATGGGCTCCGTTGTAAAAGGGAGCTATGGAGGGTTCAATATGCATTGAGCCGAATCCGTAATAATGC
AAGGATGCTTTTAACCCTTGATGAAAAGAATCCGCGTAGGATTTTTGAGGGAGAGGCCCTGCTTAGGCGGATGAACAGGGTTGGGAGGCAAGTGGTTAACATCCCTTCTT
TCATGGTGAGAGTCGATTCTCAGAAGCACATAGACTTCTCTCTCACCAGTCCATTTGGAGGTGGACGCCCCGGAAGGGTGAAAGAAAAGAACCAGAAGGCAGCTGCCAAG
AAGGCTGCTGGTGGAGATGGGGATGAAGAAGACGAGGATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGCTTTTTCTGCAAAGCCCATATGTTAATTGGGCCGTCACTCACTTCATCCAGAGCTGCGCCTAGGGCTCTGCCTCACCACAAGCAAGGGTTTTTAAGAAGTCATAT
AAATGCACCACAAACCCTCCCTCCATTTCGGCGCTTCTTTGTTTTCGTGATTAGGGCTTCCGATCGAGAGGGCGGCAGGGCTGGGAGTGAAGCCGTAGCAGAGAACCAAT
CATGTTTTTTTGGATTTTCTATTTCTCTTGTGCTTTTCTTCCGCTTATGTTGTTTCGCACATGATAGGCTATTTGATGGAAAAACTTTCAAGAAACCTCGACGACCTTAC
GAGAAGGAGCGTCTGGATGCAGAACTTAAACTTGTAGGTGAATATGGGCTCCGTTGTAAAAGGGAGCTATGGAGGGTTCAATATGCATTGAGCCGAATCCGTAATAATGC
AAGGATGCTTTTAACCCTTGATGAAAAGAATCCGCGTAGGATTTTTGAGGGAGAGGCCCTGCTTAGGCGGATGAACAGGGTTGGGAGGCAAGTGGTTAACATCCCTTCTT
TCATGGTGAGAGTCGATTCTCAGAAGCACATAGACTTCTCTCTCACCAGTCCATTTGGAGGTGGACGCCCCGGAAGGGTGAAAGAAAAGAACCAGAAGGCAGCTGCCAAG
AAGGCTGCTGGTGGAGATGGGGATGAAGAAGACGAGGATTGA
Protein sequenceShow/hide protein sequence
MGFFCKAHMLIGPSLTSSRAAPRALPHHKQGFLRSHINAPQTLPPFRRFFVFVIRASDREGGRAGSEAVAENQSCFFGFSISLVLFFRLCCFAHDRLFDGKTFKKPRRPY
EKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARMLLTLDEKNPRRIFEGEALLRRMNRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKEKNQKAAAK
KAAGGDGDEEDED