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HG10015347 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10015347
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionAmino acid transporter
Genome locationChr02:25986504..25986787
RNA-Seq ExpressionHG10015347
SyntenyHG10015347
Gene Ontology termsGO:0006865 - amino acid transport (biological process)
GO:0009734 - auxin-activated signaling pathway (biological process)
GO:0055085 - transmembrane transport (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0015293 - symporter activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0034419.1 vacuolar amino acid transporter 1-like [Cucumis melo var. makuwa]5.8e-0790.91Show/hide
Query:  MESQNQVPSTQVLVKGTTFLRTCINGINALSGV
        MESQNQ+PSTQ LVKGT+FLRTCINGINALSGV
Subjt:  MESQNQVPSTQVLVKGTTFLRTCINGINALSGV
KAG6601432.1 Amino acid transporter AVT1J, partial [Cucurbita argyrosperma subsp. sororia]1.1e-0581.82Show/hide
Query:  MESQNQVPSTQVLVKGTTFLRTCINGINALSGV
        ME+Q+Q+PSTQ+ +KGTTFLRTCINGINALSGV
Subjt:  MESQNQVPSTQVLVKGTTFLRTCINGINALSGV
XP_004135455.1 amino acid transporter AVT1I [Cucumis sativus]5.8e-0790.91Show/hide
Query:  MESQNQVPSTQVLVKGTTFLRTCINGINALSGV
        MESQNQ+PSTQ L KGTTFLRTCINGINALSGV
Subjt:  MESQNQVPSTQVLVKGTTFLRTCINGINALSGV
XP_008446354.1 PREDICTED: vacuolar amino acid transporter 1-like [Cucumis melo]5.8e-0790.91Show/hide
Query:  MESQNQVPSTQVLVKGTTFLRTCINGINALSGV
        MESQNQ+PSTQ LVKGT+FLRTCINGINALSGV
Subjt:  MESQNQVPSTQVLVKGTTFLRTCINGINALSGV
XP_023512552.1 amino acid transporter AVT1I-like [Cucurbita pepo subsp. pepo]1.1e-0581.82Show/hide
Query:  MESQNQVPSTQVLVKGTTFLRTCINGINALSGV
        ME+Q+Q+PSTQ+ +KGTTFLRTCINGINALSGV
Subjt:  MESQNQVPSTQVLVKGTTFLRTCINGINALSGV
TrEMBL top hitse value%identityAlignment
A0A0A0KSP8 Aa_trans domain-containing protein2.8e-0790.91Show/hide
Query:  MESQNQVPSTQVLVKGTTFLRTCINGINALSGV
        MESQNQ+PSTQ L KGTTFLRTCINGINALSGV
Subjt:  MESQNQVPSTQVLVKGTTFLRTCINGINALSGV
A0A1S3BED5 vacuolar amino acid transporter 1-like2.8e-0790.91Show/hide
Query:  MESQNQVPSTQVLVKGTTFLRTCINGINALSGV
        MESQNQ+PSTQ LVKGT+FLRTCINGINALSGV
Subjt:  MESQNQVPSTQVLVKGTTFLRTCINGINALSGV
A0A5D3D2X5 Vacuolar amino acid transporter 1-like2.8e-0790.91Show/hide
Query:  MESQNQVPSTQVLVKGTTFLRTCINGINALSGV
        MESQNQ+PSTQ LVKGT+FLRTCINGINALSGV
Subjt:  MESQNQVPSTQVLVKGTTFLRTCINGINALSGV
A0A6J1H012 amino acid transporter AVT1J-like isoform X15.3e-0681.82Show/hide
Query:  MESQNQVPSTQVLVKGTTFLRTCINGINALSGV
        ME+Q+Q+PSTQ+ +KGTTFLRTCINGINALSGV
Subjt:  MESQNQVPSTQVLVKGTTFLRTCINGINALSGV
A0A6J1H1R5 amino acid transporter AVT1J-like isoform X25.3e-0670.73Show/hide
Query:  MESQNQVPSTQVLVKGTTFLRTCINGINALSGVWEYYQFLL
        ME+Q+Q+PSTQ+ +KGTTFLRTCINGINALS V  Y   LL
Subjt:  MESQNQVPSTQVLVKGTTFLRTCINGINALSGVWEYYQFLL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAGCCAAAACCAGGTTCCATCTACACAGGTTTTGGTTAAAGGCACCACCTTCTTAAGAACTTGTATCAATGGAATCAATGCATTATCAGGTGTGTGGGAATATTA
TCAATTCCTTTTGCCCTTTCTCAAGGAGGGTGGCTTAGCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGAGCCAAAACCAGGTTCCATCTACACAGGTTTTGGTTAAAGGCACCACCTTCTTAAGAACTTGTATCAATGGAATCAATGCATTATCAGGTGTGTGGGAATATTA
TCAATTCCTTTTGCCCTTTCTCAAGGAGGGTGGCTTAGCTTGA
Protein sequenceShow/hide protein sequence
MESQNQVPSTQVLVKGTTFLRTCINGINALSGVWEYYQFLLPFLKEGGLA