; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10015357 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10015357
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Descriptiontranscription termination factor MTEF1, chloroplastic
Genome locationChr02:26046262..26047185
RNA-Seq ExpressionHG10015357
SyntenyHG10015357
Gene Ontology termsGO:0006353 - DNA-templated transcription, termination (biological process)
GO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0003690 - double-stranded DNA binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR003690 - Transcription termination factor, mitochondrial/chloroplastic
IPR038538 - MTERF superfamily, mitochondrial/chloroplastic


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7013135.1 Transcription termination factor MTEF1, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]6.6e-14688.24Show/hide
Query:  MISRLQLPLPCFLFLFPRSLVPSLKPLRNPNFRKPRFALSLNTQFSDHSDSGLLFREKILYLENHLNVDFRKAFRENPHSRSATLSTLKSVEVCLSSMGL
        MISR+Q   P  LFLFPRS  PSL PLRNPNFRKPRF +SLN+QFSDHSD+GLLFR+KILYLENHL+VDFRKAFRENP SRSATLS +KSVEVCLSSMGL
Subjt:  MISRLQLPLPCFLFLFPRSLVPSLKPLRNPNFRKPRFALSLNTQFSDHSDSGLLFREKILYLENHLNVDFRKAFRENPHSRSATLSTLKSVEVCLSSMGL

Query:  ELSAVGRVLDMYPKLLTSNPDYDLYPIFDFLLNEVQIPFPDIRKSIIRCPRILVSDLDLQLRPALKFLRDLGFVGLNAITCQTTMLLVSSVEHTLLPKIQ
        ELSAVGRVLDMYP+LLTS+PDYDLYPIFDFLLNEVQIPFPDIRKSI+RCPR+LVSDLDLQLRPALKFLRDLGFVGLNAIT QTT+LLVSSVEHTLLPKIQ
Subjt:  ELSAVGRVLDMYPKLLTSNPDYDLYPIFDFLLNEVQIPFPDIRKSIIRCPRILVSDLDLQLRPALKFLRDLGFVGLNAITCQTTMLLVSSVEHTLLPKIQ

Query:  YLESLGLSHEDVVNMVLRSPGLLTYSIQNNLVPKVNYFLGDMKGDLLELKSFPQYFSFSLERKIKPRHRSLVEHGLSLPLSKMLKVSDGEFTARLIEMQL
        YLE+LGLSH+DVVNMVLRSP LLTYSIQNNLVPKV+YFLGDMKGDL EL+ FPQYFSFSLERKIKPRHR LVEHGLSL LSKMLKVSDGEFTARL+EM+L
Subjt:  YLESLGLSHEDVVNMVLRSPGLLTYSIQNNLVPKVNYFLGDMKGDLLELKSFPQYFSFSLERKIKPRHRSLVEHGLSLPLSKMLKVSDGEFTARLIEMQL

Query:  QSLTAD
        QS TAD
Subjt:  QSLTAD

XP_008446371.1 PREDICTED: transcription termination factor MTEF1, chloroplastic [Cucumis melo]3.2e-14889.61Show/hide
Query:  MISRLQLPLP-CFLFLFPRSLVPSLKPLRNPNFRKPRFALSLNTQFSDHSDSGLLFREKILYLENHLNVDFRKAFRENPHSRSATLSTLKSVEVCLSSMG
        MISRLQLP P CF+F FP SL  SLKPL+NP+F KPRF LSLNTQFSD SDSGLLFREKILYLENHLNVD RKAFRENPH RSA+LSTLKSVEVCLSSMG
Subjt:  MISRLQLPLP-CFLFLFPRSLVPSLKPLRNPNFRKPRFALSLNTQFSDHSDSGLLFREKILYLENHLNVDFRKAFRENPHSRSATLSTLKSVEVCLSSMG

Query:  LELSAVGRVLDMYPKLLTSNPDYDLYPIFDFLLNEVQIPFPDIRKSIIRCPRILVSDLDLQLRPALKFLRDLGFVGLNAITCQTTMLLVSSVEHTLLPKI
        L+ SAVGRVLDMYPKLLTSNPDYD+YPIFDFLLNEVQIPFPDI KSIIRCPRILVSDLD QLRPALKFLRDLGFVGL AITCQTT+LLVS+VEHTLLPKI
Subjt:  LELSAVGRVLDMYPKLLTSNPDYDLYPIFDFLLNEVQIPFPDIRKSIIRCPRILVSDLDLQLRPALKFLRDLGFVGLNAITCQTTMLLVSSVEHTLLPKI

Query:  QYLESLGLSHEDVVNMVLRSPGLLTYSIQNNLVPKVNYFLGDMKGDLLELKSFPQYFSFSLERKIKPRHRSLVEHGLSLPLSKMLKVSDGEFTARLIEMQ
        Q+LESLGLSHEDVVNMVLRSPGLLTYSIQNNLVPKVNYFLGDMKGDLLELKSFPQYFSF+LERKIKPRHRSLVEHGLSLPLSKMLKVSDGEF A L EM+
Subjt:  QYLESLGLSHEDVVNMVLRSPGLLTYSIQNNLVPKVNYFLGDMKGDLLELKSFPQYFSFSLERKIKPRHRSLVEHGLSLPLSKMLKVSDGEFTARLIEMQ

Query:  LQSLTADR
         +SL ADR
Subjt:  LQSLTADR

XP_022945324.1 transcription termination factor MTEF1, chloroplastic [Cucurbita moschata]3.9e-14688.24Show/hide
Query:  MISRLQLPLPCFLFLFPRSLVPSLKPLRNPNFRKPRFALSLNTQFSDHSDSGLLFREKILYLENHLNVDFRKAFRENPHSRSATLSTLKSVEVCLSSMGL
        M+SR+Q   P  LFLFPRS  PSL PLRNPNFRKPRF +SLN+QFSDHSD+GLLFR+KILYLENHLNVDFRKAFRENP SRSATLS +KSVEVCLSSMGL
Subjt:  MISRLQLPLPCFLFLFPRSLVPSLKPLRNPNFRKPRFALSLNTQFSDHSDSGLLFREKILYLENHLNVDFRKAFRENPHSRSATLSTLKSVEVCLSSMGL

Query:  ELSAVGRVLDMYPKLLTSNPDYDLYPIFDFLLNEVQIPFPDIRKSIIRCPRILVSDLDLQLRPALKFLRDLGFVGLNAITCQTTMLLVSSVEHTLLPKIQ
        ELSAVGRVLDMYP+LLTS+PDYDLYPIFDFLLNEVQIPFPDIRKSI+RCPR+LVSDLDLQLRPALKFLRDLGFVGLNAIT QTT+LLVSSVEHTLLPKIQ
Subjt:  ELSAVGRVLDMYPKLLTSNPDYDLYPIFDFLLNEVQIPFPDIRKSIIRCPRILVSDLDLQLRPALKFLRDLGFVGLNAITCQTTMLLVSSVEHTLLPKIQ

Query:  YLESLGLSHEDVVNMVLRSPGLLTYSIQNNLVPKVNYFLGDMKGDLLELKSFPQYFSFSLERKIKPRHRSLVEHGLSLPLSKMLKVSDGEFTARLIEMQL
        YLE+LGLSH+DVVNMVLRSP LLTYSIQNNLVPKV+YFLGDMKGDL EL+ FPQYFSFSLERKIKPRHR LVEHGLSL LSKMLKVSDGEFTARL+EM+L
Subjt:  YLESLGLSHEDVVNMVLRSPGLLTYSIQNNLVPKVNYFLGDMKGDLLELKSFPQYFSFSLERKIKPRHRSLVEHGLSLPLSKMLKVSDGEFTARLIEMQL

Query:  QSLTAD
        QS TAD
Subjt:  QSLTAD

XP_022968085.1 transcription termination factor MTEF1, chloroplastic [Cucurbita maxima]1.9e-14587.58Show/hide
Query:  MISRLQLPLPCFLFLFPRSLVPSLKPLRNPNFRKPRFALSLNTQFSDHSDSGLLFREKILYLENHLNVDFRKAFRENPHSRSATLSTLKSVEVCLSSMGL
        MISR+Q   PC  FLFPRS  PSL P+RNPNFRKPRF +SLN+QFSDHSD+GL FR+KILYLENHL+VDFRKAFRENP SRSATLS +KSVEVCLSSMGL
Subjt:  MISRLQLPLPCFLFLFPRSLVPSLKPLRNPNFRKPRFALSLNTQFSDHSDSGLLFREKILYLENHLNVDFRKAFRENPHSRSATLSTLKSVEVCLSSMGL

Query:  ELSAVGRVLDMYPKLLTSNPDYDLYPIFDFLLNEVQIPFPDIRKSIIRCPRILVSDLDLQLRPALKFLRDLGFVGLNAITCQTTMLLVSSVEHTLLPKIQ
        ELSAVGRVLDMYP+LLTS+PDYDLYPIFDFLLNEVQIPFPDIRKSI+RCPR+LVSDLDLQLRPALKFLRDLGFVGLNAIT QTT+LLVSSVEHTLLPKIQ
Subjt:  ELSAVGRVLDMYPKLLTSNPDYDLYPIFDFLLNEVQIPFPDIRKSIIRCPRILVSDLDLQLRPALKFLRDLGFVGLNAITCQTTMLLVSSVEHTLLPKIQ

Query:  YLESLGLSHEDVVNMVLRSPGLLTYSIQNNLVPKVNYFLGDMKGDLLELKSFPQYFSFSLERKIKPRHRSLVEHGLSLPLSKMLKVSDGEFTARLIEMQL
        YLE+LGLSH+DVVNMVLRSP LLTYSIQNNLVPKV+YFLGDMKGDL EL+ FPQYFSFSLERKIKPRHR LVEHGLSL LSKMLKVSDGEFTARL+EM+L
Subjt:  YLESLGLSHEDVVNMVLRSPGLLTYSIQNNLVPKVNYFLGDMKGDLLELKSFPQYFSFSLERKIKPRHRSLVEHGLSLPLSKMLKVSDGEFTARLIEMQL

Query:  QSLTAD
        QS TAD
Subjt:  QSLTAD

XP_038892906.1 transcription termination factor MTEF1, chloroplastic [Benincasa hispida]7.8e-15594.14Show/hide
Query:  MISRLQLPLPCFLFLFPRSLVPSLKPLRNPNFRKPRFALSLNTQFSDHSDSGLLFREKILYLENHLNVDFRKAFRENPHSRSATLSTLKSVEVCLSSMGL
        MISR QLP PC  FLFPRS   +LKPLRNPNFRKPRFALSLNTQFSDHSD+GLLFREKILYLENHLNVDFRKAFRENP SRSATLST+KSVEVCLSSMGL
Subjt:  MISRLQLPLPCFLFLFPRSLVPSLKPLRNPNFRKPRFALSLNTQFSDHSDSGLLFREKILYLENHLNVDFRKAFRENPHSRSATLSTLKSVEVCLSSMGL

Query:  ELSAVGRVLDMYPKLLTSNPDYDLYPIFDFLLNEVQIPFPDIRKSIIRCPRILVSDLDLQLRPALKFLRDLGFVGLNAITCQTTMLLVSSVEHTLLPKIQ
        ELSAVGRVLDMYPKLLT+NPDYDLYPIFDFLLNEVQIPFPDIRKSIIRCPRILVSDLDLQLRPALKFLRDLGFVGLNAITCQTTMLLVSSVE TLLPKIQ
Subjt:  ELSAVGRVLDMYPKLLTSNPDYDLYPIFDFLLNEVQIPFPDIRKSIIRCPRILVSDLDLQLRPALKFLRDLGFVGLNAITCQTTMLLVSSVEHTLLPKIQ

Query:  YLESLGLSHEDVVNMVLRSPGLLTYSIQNNLVPKVNYFLGDMKGDLLELKSFPQYFSFSLERKIKPRHRSLVEHGLSLPLSKMLKVSDGEFTARLIEMQL
        YLESLGLSHEDVVNMVLRSPGLLTYSIQNNLV KVNYFL DMKGDLLELK FPQYFSFSLERKIKPRHRSLV+HGLSLPLSKMLKVSDGEFTARLIEM+L
Subjt:  YLESLGLSHEDVVNMVLRSPGLLTYSIQNNLVPKVNYFLGDMKGDLLELKSFPQYFSFSLERKIKPRHRSLVEHGLSLPLSKMLKVSDGEFTARLIEMQL

Query:  QSLTADR
        QSLTADR
Subjt:  QSLTADR

TrEMBL top hitse value%identityAlignment
A0A1S3BFK9 transcription termination factor MTEF1, chloroplastic1.5e-14889.61Show/hide
Query:  MISRLQLPLP-CFLFLFPRSLVPSLKPLRNPNFRKPRFALSLNTQFSDHSDSGLLFREKILYLENHLNVDFRKAFRENPHSRSATLSTLKSVEVCLSSMG
        MISRLQLP P CF+F FP SL  SLKPL+NP+F KPRF LSLNTQFSD SDSGLLFREKILYLENHLNVD RKAFRENPH RSA+LSTLKSVEVCLSSMG
Subjt:  MISRLQLPLP-CFLFLFPRSLVPSLKPLRNPNFRKPRFALSLNTQFSDHSDSGLLFREKILYLENHLNVDFRKAFRENPHSRSATLSTLKSVEVCLSSMG

Query:  LELSAVGRVLDMYPKLLTSNPDYDLYPIFDFLLNEVQIPFPDIRKSIIRCPRILVSDLDLQLRPALKFLRDLGFVGLNAITCQTTMLLVSSVEHTLLPKI
        L+ SAVGRVLDMYPKLLTSNPDYD+YPIFDFLLNEVQIPFPDI KSIIRCPRILVSDLD QLRPALKFLRDLGFVGL AITCQTT+LLVS+VEHTLLPKI
Subjt:  LELSAVGRVLDMYPKLLTSNPDYDLYPIFDFLLNEVQIPFPDIRKSIIRCPRILVSDLDLQLRPALKFLRDLGFVGLNAITCQTTMLLVSSVEHTLLPKI

Query:  QYLESLGLSHEDVVNMVLRSPGLLTYSIQNNLVPKVNYFLGDMKGDLLELKSFPQYFSFSLERKIKPRHRSLVEHGLSLPLSKMLKVSDGEFTARLIEMQ
        Q+LESLGLSHEDVVNMVLRSPGLLTYSIQNNLVPKVNYFLGDMKGDLLELKSFPQYFSF+LERKIKPRHRSLVEHGLSLPLSKMLKVSDGEF A L EM+
Subjt:  QYLESLGLSHEDVVNMVLRSPGLLTYSIQNNLVPKVNYFLGDMKGDLLELKSFPQYFSFSLERKIKPRHRSLVEHGLSLPLSKMLKVSDGEFTARLIEMQ

Query:  LQSLTADR
         +SL ADR
Subjt:  LQSLTADR

A0A5D3D1U5 Transcription termination factor MTEF11.5e-14889.61Show/hide
Query:  MISRLQLPLP-CFLFLFPRSLVPSLKPLRNPNFRKPRFALSLNTQFSDHSDSGLLFREKILYLENHLNVDFRKAFRENPHSRSATLSTLKSVEVCLSSMG
        MISRLQLP P CF+F FP SL  SLKPL+NP+F KPRF LSLNTQFSD SDSGLLFREKILYLENHLNVD RKAFRENPH RSA+LSTLKSVEVCLSSMG
Subjt:  MISRLQLPLP-CFLFLFPRSLVPSLKPLRNPNFRKPRFALSLNTQFSDHSDSGLLFREKILYLENHLNVDFRKAFRENPHSRSATLSTLKSVEVCLSSMG

Query:  LELSAVGRVLDMYPKLLTSNPDYDLYPIFDFLLNEVQIPFPDIRKSIIRCPRILVSDLDLQLRPALKFLRDLGFVGLNAITCQTTMLLVSSVEHTLLPKI
        L+ SAVGRVLDMYPKLLTSNPDYD+YPIFDFLLNEVQIPFPDI KSIIRCPRILVSDLD QLRPALKFLRDLGFVGL AITCQTT+LLVS+VEHTLLPKI
Subjt:  LELSAVGRVLDMYPKLLTSNPDYDLYPIFDFLLNEVQIPFPDIRKSIIRCPRILVSDLDLQLRPALKFLRDLGFVGLNAITCQTTMLLVSSVEHTLLPKI

Query:  QYLESLGLSHEDVVNMVLRSPGLLTYSIQNNLVPKVNYFLGDMKGDLLELKSFPQYFSFSLERKIKPRHRSLVEHGLSLPLSKMLKVSDGEFTARLIEMQ
        Q+LESLGLSHEDVVNMVLRSPGLLTYSIQNNLVPKVNYFLGDMKGDLLELKSFPQYFSF+LERKIKPRHRSLVEHGLSLPLSKMLKVSDGEF A L EM+
Subjt:  QYLESLGLSHEDVVNMVLRSPGLLTYSIQNNLVPKVNYFLGDMKGDLLELKSFPQYFSFSLERKIKPRHRSLVEHGLSLPLSKMLKVSDGEFTARLIEMQ

Query:  LQSLTADR
         +SL ADR
Subjt:  LQSLTADR

A0A6J1DAK3 transcription termination factor MTEF1, chloroplastic4.3e-14385.26Show/hide
Query:  MISRLQLPLPCFLFLFPRSLVPSLKPLRNPNFRKPRFALSLNTQFSDH------SDSGLLFREKILYLENHLNVDFRKAFRENPHSRSATLSTLKSVEVC
        MISRLQ P PC L LFPRS  PSLKP  NPNFR PRF +++NTQFS H      SDSG+LFREKILYLENHL+VD RKAF++NP SRSATLS LKSVEVC
Subjt:  MISRLQLPLPCFLFLFPRSLVPSLKPLRNPNFRKPRFALSLNTQFSDH------SDSGLLFREKILYLENHLNVDFRKAFRENPHSRSATLSTLKSVEVC

Query:  LSSMGLELSAVGRVLDMYPKLLTSNPDYDLYPIFDFLLNEVQIPFPDIRKSIIRCPRILVSDLDLQLRPALKFLRDLGFVGLNAITCQTTMLLVSSVEHT
        LSSMGLELSAVGRVLDMYP+LLTS+P+YDLYPIFDFLLNEV+IPFPDIRKSIIRCPRILVSDLDLQLRP L FLR+LGFVGLNAITCQTTMLLVSS+EHT
Subjt:  LSSMGLELSAVGRVLDMYPKLLTSNPDYDLYPIFDFLLNEVQIPFPDIRKSIIRCPRILVSDLDLQLRPALKFLRDLGFVGLNAITCQTTMLLVSSVEHT

Query:  LLPKIQYLESLGLSHEDVVNMVLRSPGLLTYSIQNNLVPKVNYFLGDMKGDLLELKSFPQYFSFSLERKIKPRHRSLVEHGLSLPLSKMLKVSDGEFTAR
        LLPKI+YLESLG SH+DVVNMVLRSPGLLTYSIQNNLVPKV+YFLGDMKGDLLELK FPQYFSFSLERKIKPRHR LVEHGLSL LS+MLKVSDGEFTAR
Subjt:  LLPKIQYLESLGLSHEDVVNMVLRSPGLLTYSIQNNLVPKVNYFLGDMKGDLLELKSFPQYFSFSLERKIKPRHRSLVEHGLSLPLSKMLKVSDGEFTAR

Query:  LIEMQLQSLTAD
        +IEM+LQS TAD
Subjt:  LIEMQLQSLTAD

A0A6J1G0M2 transcription termination factor MTEF1, chloroplastic1.9e-14688.24Show/hide
Query:  MISRLQLPLPCFLFLFPRSLVPSLKPLRNPNFRKPRFALSLNTQFSDHSDSGLLFREKILYLENHLNVDFRKAFRENPHSRSATLSTLKSVEVCLSSMGL
        M+SR+Q   P  LFLFPRS  PSL PLRNPNFRKPRF +SLN+QFSDHSD+GLLFR+KILYLENHLNVDFRKAFRENP SRSATLS +KSVEVCLSSMGL
Subjt:  MISRLQLPLPCFLFLFPRSLVPSLKPLRNPNFRKPRFALSLNTQFSDHSDSGLLFREKILYLENHLNVDFRKAFRENPHSRSATLSTLKSVEVCLSSMGL

Query:  ELSAVGRVLDMYPKLLTSNPDYDLYPIFDFLLNEVQIPFPDIRKSIIRCPRILVSDLDLQLRPALKFLRDLGFVGLNAITCQTTMLLVSSVEHTLLPKIQ
        ELSAVGRVLDMYP+LLTS+PDYDLYPIFDFLLNEVQIPFPDIRKSI+RCPR+LVSDLDLQLRPALKFLRDLGFVGLNAIT QTT+LLVSSVEHTLLPKIQ
Subjt:  ELSAVGRVLDMYPKLLTSNPDYDLYPIFDFLLNEVQIPFPDIRKSIIRCPRILVSDLDLQLRPALKFLRDLGFVGLNAITCQTTMLLVSSVEHTLLPKIQ

Query:  YLESLGLSHEDVVNMVLRSPGLLTYSIQNNLVPKVNYFLGDMKGDLLELKSFPQYFSFSLERKIKPRHRSLVEHGLSLPLSKMLKVSDGEFTARLIEMQL
        YLE+LGLSH+DVVNMVLRSP LLTYSIQNNLVPKV+YFLGDMKGDL EL+ FPQYFSFSLERKIKPRHR LVEHGLSL LSKMLKVSDGEFTARL+EM+L
Subjt:  YLESLGLSHEDVVNMVLRSPGLLTYSIQNNLVPKVNYFLGDMKGDLLELKSFPQYFSFSLERKIKPRHRSLVEHGLSLPLSKMLKVSDGEFTARLIEMQL

Query:  QSLTAD
        QS TAD
Subjt:  QSLTAD

A0A6J1HTW2 transcription termination factor MTEF1, chloroplastic9.4e-14687.58Show/hide
Query:  MISRLQLPLPCFLFLFPRSLVPSLKPLRNPNFRKPRFALSLNTQFSDHSDSGLLFREKILYLENHLNVDFRKAFRENPHSRSATLSTLKSVEVCLSSMGL
        MISR+Q   PC  FLFPRS  PSL P+RNPNFRKPRF +SLN+QFSDHSD+GL FR+KILYLENHL+VDFRKAFRENP SRSATLS +KSVEVCLSSMGL
Subjt:  MISRLQLPLPCFLFLFPRSLVPSLKPLRNPNFRKPRFALSLNTQFSDHSDSGLLFREKILYLENHLNVDFRKAFRENPHSRSATLSTLKSVEVCLSSMGL

Query:  ELSAVGRVLDMYPKLLTSNPDYDLYPIFDFLLNEVQIPFPDIRKSIIRCPRILVSDLDLQLRPALKFLRDLGFVGLNAITCQTTMLLVSSVEHTLLPKIQ
        ELSAVGRVLDMYP+LLTS+PDYDLYPIFDFLLNEVQIPFPDIRKSI+RCPR+LVSDLDLQLRPALKFLRDLGFVGLNAIT QTT+LLVSSVEHTLLPKIQ
Subjt:  ELSAVGRVLDMYPKLLTSNPDYDLYPIFDFLLNEVQIPFPDIRKSIIRCPRILVSDLDLQLRPALKFLRDLGFVGLNAITCQTTMLLVSSVEHTLLPKIQ

Query:  YLESLGLSHEDVVNMVLRSPGLLTYSIQNNLVPKVNYFLGDMKGDLLELKSFPQYFSFSLERKIKPRHRSLVEHGLSLPLSKMLKVSDGEFTARLIEMQL
        YLE+LGLSH+DVVNMVLRSP LLTYSIQNNLVPKV+YFLGDMKGDL EL+ FPQYFSFSLERKIKPRHR LVEHGLSL LSKMLKVSDGEFTARL+EM+L
Subjt:  YLESLGLSHEDVVNMVLRSPGLLTYSIQNNLVPKVNYFLGDMKGDLLELKSFPQYFSFSLERKIKPRHRSLVEHGLSLPLSKMLKVSDGEFTARLIEMQL

Query:  QSLTAD
        QS TAD
Subjt:  QSLTAD

SwissProt top hitse value%identityAlignment
F4IHL3 Transcription termination factor MTERF2, chloroplastic3.9e-1631.34Show/hide
Query:  MGLELSAVGRVLDMYPKLLTSNPDYDLYPIFDFLLNEVQIPFPDIRKSIIRCPRILVSDLDLQLRPALKFLRDLGFV---GLNAITCQTTMLLVSSVEHT
        +G+    + R+L + P L   + +  + P   F L E+ IP   I   +++ P +L + L  ++RP + FL     V    +  +      LL  S+   
Subjt:  MGLELSAVGRVLDMYPKLLTSNPDYDLYPIFDFLLNEVQIPFPDIRKSIIRCPRILVSDLDLQLRPALKFLRDLGFV---GLNAITCQTTMLLVSSVEHT

Query:  LLPKIQYLESLGLSHEDVVNMVLRSPGLLTYSIQNNLVPKVNYFLGDMKGDLLELKSFPQYFSFSLERKIKPRHRSLVEHGLSLPLSKMLKVSDGEFTAR
        L P ++Y  SLG+    +  M+   P LL Y++ +NL PK  Y    M   L +L  FP++FS+SLER+I PRH  +VE+ ++  L  ML  +D EF  R
Subjt:  LLPKIQYLESLGLSHEDVVNMVLRSPGLLTYSIQNNLVPKVNYFLGDMKGDLLELKSFPQYFSFSLERKIKPRHRSLVEHGLSLPLSKMLKVSDGEFTAR

Query:  L
        +
Subjt:  L

F4JVI3 Transcription termination factor MTERF5, chloroplastic3.9e-1627.27Show/hide
Query:  LKSVEVCLSSMGLELSAVGRVLDMYPKLLTSNPDYDLYPIFDFLLNEVQIPFPDIRKSIIRCPRILVSDLDLQLRPALKFLRDLGF-VGLNAITCQTTML
        LK     L ++G++ +   +++  +P +LT +    L    +F L++  +    I + + RCP I+   ++ +LRP +++ R L   V +    C  T  
Subjt:  LKSVEVCLSSMGLELSAVGRVLDMYPKLLTSNPDYDLYPIFDFLLNEVQIPFPDIRKSIIRCPRILVSDLDLQLRPALKFLRDLGF-VGLNAITCQTTML

Query:  LVSSVEHTLLPKIQYLESLGLSHEDVVNMVLRSPGLLTYSIQNNLVPKVNYFLGDMKGDLLELKSFPQYFSFSLERKIKPRHRSLVEHGLSLPLSKMLKV
        L  S+E  L P  ++    G   +++  M+ R   L T+S++ N++PK +YF   M     EL  FPQ+F +SL+ +IKPR+  +   G+ L L+++L +
Subjt:  LVSSVEHTLLPKIQYLESLGLSHEDVVNMVLRSPGLLTYSIQNNLVPKVNYFLGDMKGDLLELKSFPQYFSFSLERKIKPRHRSLVEHGLSLPLSKMLKV

Query:  SDGEFTARLIEMQLQSLTAD
        S  EF  ++++ ++  L ++
Subjt:  SDGEFTARLIEMQLQSLTAD

Q84X53 Transcription termination factor MTEF1, chloroplastic4.1e-8258.97Show/hide
Query:  FRKPRF-ALSLNTQFSDHSDSGLLFREKILYLENHLNVDFRKAFRENPHSRSATLSTLKSVEVCLSSMGLELSAVGRVLDMYPKLLTSNPDYDLYPIFDF
        F  P F A+ +     + SD+G+LFREK++YL++ LNVD  KA R NP  RSA +S++ SVE  LSS GL   AVGR+LDM+P LLTS+P+ ++ P+  F
Subjt:  FRKPRF-ALSLNTQFSDHSDSGLLFREKILYLENHLNVDFRKAFRENPHSRSATLSTLKSVEVCLSSMGLELSAVGRVLDMYPKLLTSNPDYDLYPIFDF

Query:  LLNEVQIPFPDIRKSIIRCPRILVSDLDLQLRPALKFLRDLGFVGLNAITCQTTMLLVSSVEHTLLPKIQYL-ESLGLSHEDVVNMVLRSPGLLTYSIQN
        L NE+ I   DI KSI RCPR+L+S +D QLRPAL FL+ LGFVG + IT + T+LLVS+VE TL+PKI+YL E LG + E+V  MV+RSP LLTYS+ N
Subjt:  LLNEVQIPFPDIRKSIIRCPRILVSDLDLQLRPALKFLRDLGFVGLNAITCQTTMLLVSSVEHTLLPKIQYL-ESLGLSHEDVVNMVLRSPGLLTYSIQN

Query:  NLVPKVNYFLGDMKGDLLELKSFPQYFSFSLERKIKPRHRSLVEHGLSLPLSKMLKVSDGEFTARLIEMQLQS
        NLVPKV +F+ +M+GD+ ELK FPQYFSFSLERKIKPRHR L EHG+ +PLS+MLKVSDG+F   L+E++L+S
Subjt:  NLVPKVNYFLGDMKGDLLELKSFPQYFSFSLERKIKPRHRSLVEHGLSLPLSKMLKVSDGEFTARLIEMQLQS

Q9FM80 Transcription termination factor MTERF9, chloroplastic6.5e-1928.71Show/hide
Query:  DFRKAFRENPHSRSATL-STLKSVEVCLSSMGLELSAVGRVLDMYPKLLTSNPDYDLYPIFDFLLNEVQIPFPDIRKSIIRCPRILVSDLDLQLRPALKF
        D ++     P     T+ + LK+    L  +G+  S +G+++   P L + + +  L P   +L+ EV I   D+ K +   P+ILV  LD+       F
Subjt:  DFRKAFRENPHSRSATL-STLKSVEVCLSSMGLELSAVGRVLDMYPKLLTSNPDYDLYPIFDFLLNEVQIPFPDIRKSIIRCPRILVSDLDLQLRPALKF

Query:  L-RDLGFVGLNAITC--QTTMLLVSSVEHTLLPKIQYLESLGLSHEDVVNMVLRSPGLLTYSIQNNLVPKVNYFLGDMKGDLLELKSFPQYFSFSLERKI
        L ++LG    + +    +   LL  S++   LP+I +L S+G+ + D++ ++     +L+ S+++NL PK  Y + ++  ++  L  +P Y S SL+++I
Subjt:  L-RDLGFVGLNAITC--QTTMLLVSSVEHTLLPKIQYLESLGLSHEDVVNMVLRSPGLLTYSIQNNLVPKVNYFLGDMKGDLLELKSFPQYFSFSLERKI

Query:  KPRHRSLVE
        +PRHR LVE
Subjt:  KPRHRSLVE

Q9ZT96 Transcription termination factor MTERF4, chloroplastic6.5e-1126.82Show/hide
Query:  LKSVEVCLSSMGLELSAVGRVLDMYPKLLTSNPDYDLYP----IFDFLLNEVQIPFPDIRKSIIRCPRILVSDLDLQLRPALKFL--------RDLGFVG
        +K +   L  +G+   A  R+++  P +L    D  + P    + DF + E  +P       I + P I+  DL  +L    K L         DLG + 
Subjt:  LKSVEVCLSSMGLELSAVGRVLDMYPKLLTSNPDYDLYP----IFDFLLNEVQIPFPDIRKSIIRCPRILVSDLDLQLRPALKFL--------RDLGFVG

Query:  LNAITCQTTMLLVSSVEHTLLPKIQYLESLGLSHEDVVNMVLRSPGLLTYSIQNNLVPKVNYFLGDMKGDLLELKSFPQYFSFSLERKIKPRHRSLVEHG
              +     VS  E  +L  I +L   G S +    MV+  P +L  ++   +     YF  +MK  L +L  FP +F++ LE  +KPRH+ +++ G
Subjt:  LNAITCQTTMLLVSSVEHTLLPKIQYLESLGLSHEDVVNMVLRSPGLLTYSIQNNLVPKVNYFLGDMKGDLLELKSFPQYFSFSLERKIKPRHRSLVEHG

Query:  LSLPLSKMLKVSDGEFTARL
        +   L+ ML  SD +F  R+
Subjt:  LSLPLSKMLKVSDGEFTARL

Arabidopsis top hitse value%identityAlignment
AT2G03050.1 Mitochondrial transcription termination factor family protein2.9e-8358.97Show/hide
Query:  FRKPRF-ALSLNTQFSDHSDSGLLFREKILYLENHLNVDFRKAFRENPHSRSATLSTLKSVEVCLSSMGLELSAVGRVLDMYPKLLTSNPDYDLYPIFDF
        F  P F A+ +     + SD+G+LFREK++YL++ LNVD  KA R NP  RSA +S++ SVE  LSS GL   AVGR+LDM+P LLTS+P+ ++ P+  F
Subjt:  FRKPRF-ALSLNTQFSDHSDSGLLFREKILYLENHLNVDFRKAFRENPHSRSATLSTLKSVEVCLSSMGLELSAVGRVLDMYPKLLTSNPDYDLYPIFDF

Query:  LLNEVQIPFPDIRKSIIRCPRILVSDLDLQLRPALKFLRDLGFVGLNAITCQTTMLLVSSVEHTLLPKIQYL-ESLGLSHEDVVNMVLRSPGLLTYSIQN
        L NE+ I   DI KSI RCPR+L+S +D QLRPAL FL+ LGFVG + IT + T+LLVS+VE TL+PKI+YL E LG + E+V  MV+RSP LLTYS+ N
Subjt:  LLNEVQIPFPDIRKSIIRCPRILVSDLDLQLRPALKFLRDLGFVGLNAITCQTTMLLVSSVEHTLLPKIQYL-ESLGLSHEDVVNMVLRSPGLLTYSIQN

Query:  NLVPKVNYFLGDMKGDLLELKSFPQYFSFSLERKIKPRHRSLVEHGLSLPLSKMLKVSDGEFTARLIEMQLQS
        NLVPKV +F+ +M+GD+ ELK FPQYFSFSLERKIKPRHR L EHG+ +PLS+MLKVSDG+F   L+E++L+S
Subjt:  NLVPKVNYFLGDMKGDLLELKSFPQYFSFSLERKIKPRHRSLVEHGLSLPLSKMLKVSDGEFTARLIEMQLQS

AT2G34620.1 Mitochondrial transcription termination factor family protein1.6e-5748.95Show/hide
Query:  LLFREKILYLENHLNVDFRKAFRENPHSRSATLSTLKSVEVCLSSMGLELSAVGRVLDMYPKLLTSNPDYDLYPIFDFLLNEVQIPFPDIRKSIIRCPRI
        L  +EKIL LE  + +D  KA   NP   SA L +++SV   L S G+  + + R+L M PK+LTS+   +LYP+F FL N++ +P    R+ I +CPR+
Subjt:  LLFREKILYLENHLNVDFRKAFRENPHSRSATLSTLKSVEVCLSSMGLELSAVGRVLDMYPKLLTSNPDYDLYPIFDFLLNEVQIPFPDIRKSIIRCPRI

Query:  LVSDLDLQLRPALKFLRDLGFVGLNAITCQTTMLLVSSVEHTLLPKIQYLESLGLSHEDVVNMVLRSPGLLTYSIQNNLVPKVNYFLGDMKGDLLELKSF
        L+S ++ QL+PAL +L+ LG   L A+  Q  +LLVSSVEHTL+PK+++LES+G S  + + M+LR P L T+SI+NN  PK++YF+ ++KG L  LK F
Subjt:  LVSDLDLQLRPALKFLRDLGFVGLNAITCQTTMLLVSSVEHTLLPKIQYLESLGLSHEDVVNMVLRSPGLLTYSIQNNLVPKVNYFLGDMKGDLLELKSF

Query:  PQYFSFSLERKIKPRHRSLVEHGLSLPLSKMLKVSDGEF
        PQYF+FSLE++IKPRH   +E GL LPLS MLK +D EF
Subjt:  PQYFSFSLERKIKPRHRSLVEHGLSLPLSKMLKVSDGEF

AT2G36000.1 Mitochondrial transcription termination factor family protein1.0e-3538.24Show/hide
Query:  EKILYLENHLNVDFRKAFRENPHSRSATLSTLKSVEVCLSS--MGLELSAVGRVLDMYPKLLTSNPDYDLYPIFDFLLNEVQI-PFPDIRKSIIRCPRIL
        EK++YL++ L +DF      +P   S  LS ++SV   +++  +   L    R++ M P+LLTS       P+  FLL EV +    D+R+++ R PR+L
Subjt:  EKILYLENHLNVDFRKAFRENPHSRSATLSTLKSVEVCLSS--MGLELSAVGRVLDMYPKLLTSNPDYDLYPIFDFLLNEVQI-PFPDIRKSIIRCPRIL

Query:  VSDLDLQLRPALKFLRDLGFVGLNAITCQTTMLLVSSVEHTLLPKIQYLESLGLSHEDVVNMVLRSPGLLTYSIQNNLVPKVNYFLGDMKGDLLELKSFP
           +D QLRP L FL+ +G +  +    + T LL  SV++ L+P+I Y E LG S      M  R P L  YSI  N  PK+ Y + +M  D+ E+  FP
Subjt:  VSDLDLQLRPALKFLRDLGFVGLNAITCQTTMLLVSSVEHTLLPKIQYLESLGLSHEDVVNMVLRSPGLLTYSIQNNLVPKVNYFLGDMKGDLLELKSFP

Query:  QYFSFSLERKIKPRHRSLVEHGLSLPLSKMLKVSDGEF
        QYFSFSLE +IKPRH +    G+  PL  MLK ++  F
Subjt:  QYFSFSLERKIKPRHRSLVEHGLSLPLSKMLKVSDGEF

AT2G36000.2 Mitochondrial transcription termination factor family protein1.0e-3538.24Show/hide
Query:  EKILYLENHLNVDFRKAFRENPHSRSATLSTLKSVEVCLSS--MGLELSAVGRVLDMYPKLLTSNPDYDLYPIFDFLLNEVQI-PFPDIRKSIIRCPRIL
        EK++YL++ L +DF      +P   S  LS ++SV   +++  +   L    R++ M P+LLTS       P+  FLL EV +    D+R+++ R PR+L
Subjt:  EKILYLENHLNVDFRKAFRENPHSRSATLSTLKSVEVCLSS--MGLELSAVGRVLDMYPKLLTSNPDYDLYPIFDFLLNEVQI-PFPDIRKSIIRCPRIL

Query:  VSDLDLQLRPALKFLRDLGFVGLNAITCQTTMLLVSSVEHTLLPKIQYLESLGLSHEDVVNMVLRSPGLLTYSIQNNLVPKVNYFLGDMKGDLLELKSFP
           +D QLRP L FL+ +G +  +    + T LL  SV++ L+P+I Y E LG S      M  R P L  YSI  N  PK+ Y + +M  D+ E+  FP
Subjt:  VSDLDLQLRPALKFLRDLGFVGLNAITCQTTMLLVSSVEHTLLPKIQYLESLGLSHEDVVNMVLRSPGLLTYSIQNNLVPKVNYFLGDMKGDLLELKSFP

Query:  QYFSFSLERKIKPRHRSLVEHGLSLPLSKMLKVSDGEF
        QYFSFSLE +IKPRH +    G+  PL  MLK ++  F
Subjt:  QYFSFSLERKIKPRHRSLVEHGLSLPLSKMLKVSDGEF

AT3G18870.1 Mitochondrial transcription termination factor family protein1.3e-3036.49Show/hide
Query:  LSTLKSVEVCLSSMGLELSAVGRVLDMYPKLLTSNPDYD-LYPIFDFLLNEVQIPFPDIRKSIIRCPRILVSDLDLQLRPALKFLRDLGFVGLNAITCQT
        LS + S    L S G+      R++ + P+L +   D   L P+FDFL  E+     + R  I+ CP IL SD++  LRP L +L++LG   LN  +   
Subjt:  LSTLKSVEVCLSSMGLELSAVGRVLDMYPKLLTSNPDYD-LYPIFDFLLNEVQIPFPDIRKSIIRCPRILVSDLDLQLRPALKFLRDLGFVGLNAITCQT

Query:  TMLLVSSVEHTLLPKIQYLESLGLSHEDVVNMVLRSPGLLTYSIQNNLVPKVNYFLGDMKGDLLELKSFPQYFSFSLERKIKPRHRSLVEHGLSLPLSKM
          +L + VE  L  K+++L+S+G  HE+   +  R P +  YS+++NL PK  + + DM+ +L ELK FPQYF+FSL ++I+PRH  L +  + + LS+M
Subjt:  TMLLVSSVEHTLLPKIQYLESLGLSHEDVVNMVLRSPGLLTYSIQNNLVPKVNYFLGDMKGDLLELKSFPQYFSFSLERKIKPRHRSLVEHGLSLPLSKM

Query:  LKVSDGEFTAR
        L   D +F ++
Subjt:  LKVSDGEFTAR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATAAGCAGGCTCCAACTTCCTCTCCCATGCTTCCTCTTCCTCTTTCCTCGGTCTTTAGTCCCATCTCTTAAGCCCTTGAGAAACCCTAATTTCAGAAAACCTCGGTT
CGCCCTTTCCCTCAATACCCAATTTTCCGACCACTCCGACTCCGGCCTCCTTTTCCGGGAAAAAATACTCTACCTCGAGAACCACCTTAATGTCGATTTCCGAAAAGCCT
TCCGGGAGAATCCCCATTCTCGTTCCGCCACTCTCTCCACCCTCAAATCCGTCGAGGTTTGTCTCTCCTCAATGGGACTCGAGCTCTCTGCAGTCGGCCGCGTTCTCGAC
ATGTACCCCAAACTCCTCACCTCCAATCCGGACTATGATCTTTACCCCATTTTCGATTTCCTTCTTAATGAGGTTCAAATTCCGTTTCCCGACATTCGAAAATCCATAAT
TCGATGCCCTAGAATTCTCGTCTCCGACTTGGACCTTCAATTGCGACCTGCGCTGAAGTTCTTGCGCGACCTAGGTTTCGTTGGGTTGAACGCCATCACGTGCCAGACGA
CAATGCTACTGGTCTCGAGTGTTGAACATACGCTTTTGCCTAAGATTCAGTACCTTGAGAGCTTGGGCTTATCGCACGAGGATGTGGTTAATATGGTGTTAAGGTCTCCT
GGGTTGTTGACTTACAGTATTCAAAATAATTTGGTTCCTAAAGTGAATTATTTCTTAGGAGACATGAAGGGTGACTTGTTGGAATTGAAAAGTTTTCCGCAATATTTTTC
ATTTAGTTTGGAGAGAAAGATTAAGCCGCGTCATCGTTCGTTAGTTGAACATGGATTGTCACTTCCTTTGTCGAAAATGCTGAAGGTTAGTGACGGGGAGTTCACTGCAA
GGTTGATAGAAATGCAATTGCAGTCCTTGACGGCTGATCGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGATAAGCAGGCTCCAACTTCCTCTCCCATGCTTCCTCTTCCTCTTTCCTCGGTCTTTAGTCCCATCTCTTAAGCCCTTGAGAAACCCTAATTTCAGAAAACCTCGGTT
CGCCCTTTCCCTCAATACCCAATTTTCCGACCACTCCGACTCCGGCCTCCTTTTCCGGGAAAAAATACTCTACCTCGAGAACCACCTTAATGTCGATTTCCGAAAAGCCT
TCCGGGAGAATCCCCATTCTCGTTCCGCCACTCTCTCCACCCTCAAATCCGTCGAGGTTTGTCTCTCCTCAATGGGACTCGAGCTCTCTGCAGTCGGCCGCGTTCTCGAC
ATGTACCCCAAACTCCTCACCTCCAATCCGGACTATGATCTTTACCCCATTTTCGATTTCCTTCTTAATGAGGTTCAAATTCCGTTTCCCGACATTCGAAAATCCATAAT
TCGATGCCCTAGAATTCTCGTCTCCGACTTGGACCTTCAATTGCGACCTGCGCTGAAGTTCTTGCGCGACCTAGGTTTCGTTGGGTTGAACGCCATCACGTGCCAGACGA
CAATGCTACTGGTCTCGAGTGTTGAACATACGCTTTTGCCTAAGATTCAGTACCTTGAGAGCTTGGGCTTATCGCACGAGGATGTGGTTAATATGGTGTTAAGGTCTCCT
GGGTTGTTGACTTACAGTATTCAAAATAATTTGGTTCCTAAAGTGAATTATTTCTTAGGAGACATGAAGGGTGACTTGTTGGAATTGAAAAGTTTTCCGCAATATTTTTC
ATTTAGTTTGGAGAGAAAGATTAAGCCGCGTCATCGTTCGTTAGTTGAACATGGATTGTCACTTCCTTTGTCGAAAATGCTGAAGGTTAGTGACGGGGAGTTCACTGCAA
GGTTGATAGAAATGCAATTGCAGTCCTTGACGGCTGATCGTTGA
Protein sequenceShow/hide protein sequence
MISRLQLPLPCFLFLFPRSLVPSLKPLRNPNFRKPRFALSLNTQFSDHSDSGLLFREKILYLENHLNVDFRKAFRENPHSRSATLSTLKSVEVCLSSMGLELSAVGRVLD
MYPKLLTSNPDYDLYPIFDFLLNEVQIPFPDIRKSIIRCPRILVSDLDLQLRPALKFLRDLGFVGLNAITCQTTMLLVSSVEHTLLPKIQYLESLGLSHEDVVNMVLRSP
GLLTYSIQNNLVPKVNYFLGDMKGDLLELKSFPQYFSFSLERKIKPRHRSLVEHGLSLPLSKMLKVSDGEFTARLIEMQLQSLTADR