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HG10015438 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10015438
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionDNA-directed RNA polymerase
Genome locationChr02:26591275..26591538
RNA-Seq ExpressionHG10015438
SyntenyHG10015438
Gene Ontology termsGO:0016740 - transferase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0034491.1 DNA-directed RNA polymerase 1B [Cucumis melo var. makuwa]1.3e-0953.42Show/hide
Query:  GATEFLPSWCSYPNQNSDILQPSRDSAMLKDRAFKVIDKGRTWRNLINLKRRDIHGHPLPWFSDCWKLTDDTP
        GAT++LPSW S   ++SDILQP RDSAML D +F    K     +L  L R  IHG  LPWFSDCW +T ++P
Subjt:  GATEFLPSWCSYPNQNSDILQPSRDSAMLKDRAFKVIDKGRTWRNLINLKRRDIHGHPLPWFSDCWKLTDDTP
TrEMBL top hitse value%identityAlignment
A0A5A7SYG2 DNA-directed RNA polymerase6.1e-1053.42Show/hide
Query:  GATEFLPSWCSYPNQNSDILQPSRDSAMLKDRAFKVIDKGRTWRNLINLKRRDIHGHPLPWFSDCWKLTDDTP
        GAT++LPSW S   ++SDILQP RDSAML D +F    K     +L  L R  IHG  LPWFSDCW +T ++P
Subjt:  GATEFLPSWCSYPNQNSDILQPSRDSAMLKDRAFKVIDKGRTWRNLINLKRRDIHGHPLPWFSDCWKLTDDTP
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTGCACTTGGGAGCTACAGAGTTTCTACCCTCATGGTGCTCTTATCCAAACCAAAACTCAGATATACTGCAACCAAGCAGGGATTCAGCAATGCTGAAAGACAGGGC
TTTCAAAGTGATAGACAAAGGAAGAACTTGGCGCAATCTTATTAATTTAAAGAGGAGAGATATCCATGGACATCCTCTTCCATGGTTTTCAGATTGCTGGAAACTCACTG
ATGATACTCCCGAAGATCAGCTGGAGTTTTGTCATGTAGTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGCTGCACTTGGGAGCTACAGAGTTTCTACCCTCATGGTGCTCTTATCCAAACCAAAACTCAGATATACTGCAACCAAGCAGGGATTCAGCAATGCTGAAAGACAGGGC
TTTCAAAGTGATAGACAAAGGAAGAACTTGGCGCAATCTTATTAATTTAAAGAGGAGAGATATCCATGGACATCCTCTTCCATGGTTTTCAGATTGCTGGAAACTCACTG
ATGATACTCCCGAAGATCAGCTGGAGTTTTGTCATGTAGTTTAA
Protein sequenceShow/hide protein sequence
MLHLGATEFLPSWCSYPNQNSDILQPSRDSAMLKDRAFKVIDKGRTWRNLINLKRRDIHGHPLPWFSDCWKLTDDTPEDQLEFCHVV