; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10015443 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10015443
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionIleal sodium/bile acid cotransporter, putative
Genome locationChr02:26635007..26635543
RNA-Seq ExpressionHG10015443
SyntenyHG10015443
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EOY01534.1 Ileal sodium/bile acid cotransporter, putative [Theobroma cacao]3.4e-0934.17Show/hide
Query:  EFQSHQIPITNRYTSFGEMNLSLTFQAAIGLVVSPQISPSPF---LQIAEVMLVINYGVSFSGVFLRNSFPRLGNNLEKFGSVLTSSIFFLMAASFLPAS
        E QS+Q        S G+  LSL+FQ  + L +S  +  +     + I ++ +++ +  SFSG+FLR+S+P++ N +E  GS++ +  FF+M + FLP +
Subjt:  EFQSHQIPITNRYTSFGEMNLSLTFQAAIGLVVSPQISPSPF---LQIAEVMLVINYGVSFSGVFLRNSFPRLGNNLEKFGSVLTSSIFFLMAASFLPAS

Query:  FCWISWPVFALSMAAFLLSL
          W++W   A S+ AF  SL
Subjt:  FCWISWPVFALSMAAFLLSL

KAA0050246.1 putative Ileal sodium/bile acid cotransporter [Cucumis melo var. makuwa]8.4e-0833.8Show/hide
Query:  FIHAIASSRRTFQQNTLPLYVVHEFQSHQIPITNRYT--SFGEMNLSLTFQAAIGL-VVSPQISPSPFLQIAEVMLVINYGVSFSGVFLRNSFPRLGNNL
        FI AI  + R  + N+LP+ +  +  S   P  +  T  + G+  L LTFQA + L + SP  SP     +    ++I++ VSF+G+FL+N FPR+    
Subjt:  FIHAIASSRRTFQQNTLPLYVVHEFQSHQIPITNRYT--SFGEMNLSLTFQAAIGL-VVSPQISPSPFLQIAEVMLVINYGVSFSGVFLRNSFPRLGNNL

Query:  EKFGSVLTSSIFFLMAASFLPASFCWISWPVFALSMAAFLLS
        EK G+++ +    ++A+  +  +F WISW     S+ AF+LS
Subjt:  EKFGSVLTSSIFFLMAASFLPASFCWISWPVFALSMAAFLLS

MBA0843405.1 hypothetical protein [Gossypium armourianum]1.1e-0727.36Show/hide
Query:  PSHHPPFSFRNLIKHAVSVNRFQIITRFIHAIAS--------SRRTFQQNTLPLYVVH----------------------EFQSHQIPITNRYTSFGEMN
        PS++PPFS  ++IKH+   +   ++++F H+  +        SR T Q     +  +                       E QSH         S G+  
Subjt:  PSHHPPFSFRNLIKHAVSVNRFQIITRFIHAIAS--------SRRTFQQNTLPLYVVH----------------------EFQSHQIPITNRYTSFGEMN

Query:  LSLTFQAAIGLVVSPQISPS----PFLQIAEVMLVINYGVSFSGVFLRNSFPRLGNNLEKFGSVLTSSIFFLMAASFLPASFCWISWPVFALSMAAFLLS
        +SL FQA   L +S     +    P L  +   +V+ +  SFSG++L  S PR+ + +    S++ +  FF+M++ FLP +F W++W     S+ AF LS
Subjt:  LSLTFQAAIGLVVSPQISPS----PFLQIAEVMLVINYGVSFSGVFLRNSFPRLGNNLEKFGSVLTSSIFFLMAASFLPASFCWISWPVFALSMAAFLLS

Query:  L
        L
Subjt:  L

OMO72209.1 hypothetical protein COLO4_27768 [Corchorus olitorius]2.0e-0935.11Show/hide
Query:  RFIHAIASSRRTFQQ-NTLPLYV-VHEFQSHQIPITNRYTSFGEMNLSLTFQAAIGLVVSPQISPSPFL--QIAEVMLVINYGVSFSGVFLRNSFPRLGN
        RF  A   S+RT Q  ++ PLY+   E +           + G+  +SLTFQ  + L +S   S    L  QI +V +++ +  SFSG+FLRNS+P+   
Subjt:  RFIHAIASSRRTFQQ-NTLPLYV-VHEFQSHQIPITNRYTSFGEMNLSLTFQAAIGLVVSPQISPSPFL--QIAEVMLVINYGVSFSGVFLRNSFPRLGN

Query:  NLEKFGSVLTSSIFFLMAASFLPASFCWISW
         +E  GS+  +  FF+M + FLP  F W++W
Subjt:  NLEKFGSVLTSSIFFLMAASFLPASFCWISW

XP_021293273.1 uncharacterized protein LOC110423379 isoform X1 [Herrania umbratica]1.2e-0931.87Show/hide
Query:  IKHAVSVNRFQIITRFIHAIASSR-RTFQQNTLPLYVVH-EFQSHQIPITNRYTSFGEMNLSLTFQAAIGLVVSPQISPSPFL---QIAEVMLVINYGVS
        I  + S+     ITR     AS + R    + +PLY+ + E + H         S G+  LSL+FQ  + L  S  +  +  L      ++ +++ +  S
Subjt:  IKHAVSVNRFQIITRFIHAIASSR-RTFQQNTLPLYVVH-EFQSHQIPITNRYTSFGEMNLSLTFQAAIGLVVSPQISPSPFL---QIAEVMLVINYGVS

Query:  FSGVFLRNSFPRLGNNLEKFGSVLTSSIFFLMAASFLPASFCWISWPVFALSMAAFLLSL
        FSG+FLR+S+P++ N +E  GS++ +  FF+M + FLP +F W++W   A S+ AF  SL
Subjt:  FSGVFLRNSFPRLGNNLEKFGSVLTSSIFFLMAASFLPASFCWISWPVFALSMAAFLLSL

TrEMBL top hitse value%identityAlignment
A0A061EGV0 Ileal sodium/bile acid cotransporter, putative1.6e-0934.17Show/hide
Query:  EFQSHQIPITNRYTSFGEMNLSLTFQAAIGLVVSPQISPSPF---LQIAEVMLVINYGVSFSGVFLRNSFPRLGNNLEKFGSVLTSSIFFLMAASFLPAS
        E QS+Q        S G+  LSL+FQ  + L +S  +  +     + I ++ +++ +  SFSG+FLR+S+P++ N +E  GS++ +  FF+M + FLP +
Subjt:  EFQSHQIPITNRYTSFGEMNLSLTFQAAIGLVVSPQISPSPF---LQIAEVMLVINYGVSFSGVFLRNSFPRLGNNLEKFGSVLTSSIFFLMAASFLPAS

Query:  FCWISWPVFALSMAAFLLSL
          W++W   A S+ AF  SL
Subjt:  FCWISWPVFALSMAAFLLSL

A0A1R3HPA4 Uncharacterized protein9.6e-1035.11Show/hide
Query:  RFIHAIASSRRTFQQ-NTLPLYV-VHEFQSHQIPITNRYTSFGEMNLSLTFQAAIGLVVSPQISPSPFL--QIAEVMLVINYGVSFSGVFLRNSFPRLGN
        RF  A   S+RT Q  ++ PLY+   E +           + G+  +SLTFQ  + L +S   S    L  QI +V +++ +  SFSG+FLRNS+P+   
Subjt:  RFIHAIASSRRTFQQ-NTLPLYV-VHEFQSHQIPITNRYTSFGEMNLSLTFQAAIGLVVSPQISPSPFL--QIAEVMLVINYGVSFSGVFLRNSFPRLGN

Query:  NLEKFGSVLTSSIFFLMAASFLPASFCWISW
         +E  GS+  +  FF+M + FLP  F W++W
Subjt:  NLEKFGSVLTSSIFFLMAASFLPASFCWISW

A0A5A7U7U1 Putative Ileal sodium/bile acid cotransporter4.0e-0833.8Show/hide
Query:  FIHAIASSRRTFQQNTLPLYVVHEFQSHQIPITNRYT--SFGEMNLSLTFQAAIGL-VVSPQISPSPFLQIAEVMLVINYGVSFSGVFLRNSFPRLGNNL
        FI AI  + R  + N+LP+ +  +  S   P  +  T  + G+  L LTFQA + L + SP  SP     +    ++I++ VSF+G+FL+N FPR+    
Subjt:  FIHAIASSRRTFQQNTLPLYVVHEFQSHQIPITNRYT--SFGEMNLSLTFQAAIGL-VVSPQISPSPFLQIAEVMLVINYGVSFSGVFLRNSFPRLGNNL

Query:  EKFGSVLTSSIFFLMAASFLPASFCWISWPVFALSMAAFLLS
        EK G+++ +    ++A+  +  +F WISW     S+ AF+LS
Subjt:  EKFGSVLTSSIFFLMAASFLPASFCWISWPVFALSMAAFLLS

A0A6J1B1Z4 uncharacterized protein LOC110423379 isoform X15.6e-1031.87Show/hide
Query:  IKHAVSVNRFQIITRFIHAIASSR-RTFQQNTLPLYVVH-EFQSHQIPITNRYTSFGEMNLSLTFQAAIGLVVSPQISPSPFL---QIAEVMLVINYGVS
        I  + S+     ITR     AS + R    + +PLY+ + E + H         S G+  LSL+FQ  + L  S  +  +  L      ++ +++ +  S
Subjt:  IKHAVSVNRFQIITRFIHAIASSR-RTFQQNTLPLYVVH-EFQSHQIPITNRYTSFGEMNLSLTFQAAIGLVVSPQISPSPFL---QIAEVMLVINYGVS

Query:  FSGVFLRNSFPRLGNNLEKFGSVLTSSIFFLMAASFLPASFCWISWPVFALSMAAFLLSL
        FSG+FLR+S+P++ N +E  GS++ +  FF+M + FLP +F W++W   A S+ AF  SL
Subjt:  FSGVFLRNSFPRLGNNLEKFGSVLTSSIFFLMAASFLPASFCWISWPVFALSMAAFLLSL

A0A7J9KAB3 Uncharacterized protein5.3e-0827.36Show/hide
Query:  PSHHPPFSFRNLIKHAVSVNRFQIITRFIHAIAS--------SRRTFQQNTLPLYVVH----------------------EFQSHQIPITNRYTSFGEMN
        PS++PPFS  ++IKH+   +   ++++F H+  +        SR T Q     +  +                       E QSH         S G+  
Subjt:  PSHHPPFSFRNLIKHAVSVNRFQIITRFIHAIAS--------SRRTFQQNTLPLYVVH----------------------EFQSHQIPITNRYTSFGEMN

Query:  LSLTFQAAIGLVVSPQISPS----PFLQIAEVMLVINYGVSFSGVFLRNSFPRLGNNLEKFGSVLTSSIFFLMAASFLPASFCWISWPVFALSMAAFLLS
        +SL FQA   L +S     +    P L  +   +V+ +  SFSG++L  S PR+ + +    S++ +  FF+M++ FLP +F W++W     S+ AF LS
Subjt:  LSLTFQAAIGLVVSPQISPS----PFLQIAEVMLVINYGVSFSGVFLRNSFPRLGNNLEKFGSVLTSSIFFLMAASFLPASFCWISWPVFALSMAAFLLS

Query:  L
        L
Subjt:  L

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCCCATTCACCACCTCCTCCTCCTTCACATCACCCACCATTTTCCTTTCGCAATCTCATAAAACATGCTGTTTCAGTCAATAGATTTCAGATCATTACCAGATT
TATTCACGCCATAGCATCAAGTCGAAGGACATTTCAACAGAACACACTTCCATTGTACGTCGTTCATGAATTCCAGAGCCATCAAATTCCTATCACGAACCGCTACACCA
GCTTCGGGGAGATGAATTTGAGTCTCACTTTTCAGGCTGCCATAGGACTGGTCGTCTCTCCACAGATTTCACCTTCTCCATTCCTGCAAATCGCAGAGGTAATGTTGGTG
ATAAATTATGGAGTTTCGTTTTCTGGTGTTTTTCTTCGAAATTCCTTTCCGAGACTCGGAAACAATCTCGAGAAATTCGGTTCAGTATTAACCTCCTCCATCTTCTTCCT
AATGGCCGCCTCCTTCCTTCCGGCGAGTTTTTGCTGGATAAGTTGGCCGGTGTTTGCTCTGTCAATGGCGGCATTCTTGCTCTCGCTCTTCAGATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCCCATTCACCACCTCCTCCTCCTTCACATCACCCACCATTTTCCTTTCGCAATCTCATAAAACATGCTGTTTCAGTCAATAGATTTCAGATCATTACCAGATT
TATTCACGCCATAGCATCAAGTCGAAGGACATTTCAACAGAACACACTTCCATTGTACGTCGTTCATGAATTCCAGAGCCATCAAATTCCTATCACGAACCGCTACACCA
GCTTCGGGGAGATGAATTTGAGTCTCACTTTTCAGGCTGCCATAGGACTGGTCGTCTCTCCACAGATTTCACCTTCTCCATTCCTGCAAATCGCAGAGGTAATGTTGGTG
ATAAATTATGGAGTTTCGTTTTCTGGTGTTTTTCTTCGAAATTCCTTTCCGAGACTCGGAAACAATCTCGAGAAATTCGGTTCAGTATTAACCTCCTCCATCTTCTTCCT
AATGGCCGCCTCCTTCCTTCCGGCGAGTTTTTGCTGGATAAGTTGGCCGGTGTTTGCTCTGTCAATGGCGGCATTCTTGCTCTCGCTCTTCAGATGA
Protein sequenceShow/hide protein sequence
MASHSPPPPPSHHPPFSFRNLIKHAVSVNRFQIITRFIHAIASSRRTFQQNTLPLYVVHEFQSHQIPITNRYTSFGEMNLSLTFQAAIGLVVSPQISPSPFLQIAEVMLV
INYGVSFSGVFLRNSFPRLGNNLEKFGSVLTSSIFFLMAASFLPASFCWISWPVFALSMAAFLLSLFR