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HG10015467 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10015467
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionNudix hydrolase
Genome locationChr02:26913764..26914315
RNA-Seq ExpressionHG10015467
SyntenyHG10015467
Gene Ontology termsGO:0006203 - dGTP catabolic process (biological process)
GO:0005829 - cytosol (cellular component)
GO:0035539 - 8-oxo-7,8-dihydrodeoxyguanosine triphosphate pyrophosphatase activity (molecular function)
InterPro domainsIPR000086 - NUDIX hydrolase domain
IPR015797 - NUDIX hydrolase-like domain superfamily
IPR020084 - NUDIX hydrolase, conserved site
IPR020476 - NUDIX hydrolase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0034516.1 nudix hydrolase 1-like [Cucumis melo var. makuwa]2.6e-7187.42Show/hide
Query:  MVSAAKEDHTAS--APQVAVAICLLRGKWILMGRRLVSIGNSKFSLPSGHLEFGENFEECAAREIKEETGLDIEKIEFLKVTNNVFMDQPSPAHYVVVFV
        +  A ++DH A+  +PQVAVAICLLR K ILMGRRLVSIGNSK+SLPSGHLEFGENFEECA REIKEETGLDI KIEFLKVTNN+FMDQP PAHYVVVFV
Subjt:  MVSAAKEDHTAS--APQVAVAICLLRGKWILMGRRLVSIGNSKFSLPSGHLEFGENFEECAAREIKEETGLDIEKIEFLKVTNNVFMDQPSPAHYVVVFV

Query:  RAVLTDPTQTPLNLEPEKCDGWDWYEWNNLPQPLFGPIKKMVMDGFNPFPQ
        RAVLTDPTQTPLNLEPEKCDGWDWYEW+NLPQPLFGPIKKMVMDGFNPFPQ
Subjt:  RAVLTDPTQTPLNLEPEKCDGWDWYEWNNLPQPLFGPIKKMVMDGFNPFPQ

XP_004135122.1 geranyl diphosphate phosphohydrolase [Cucumis sativus]2.7e-6885.43Show/hide
Query:  MVSAAKED--HTAS-APQVAVAICLLRGKWILMGRRLVSIGNSKFSLPSGHLEFGENFEECAAREIKEETGLDIEKIEFLKVTNNVFMDQPSPAHYVVVF
        +V A ++D  H AS +PQVAVAICLL+ K ILMGRRLVSIGNSK+SLPSGHLEFGENFEECA REIKEETGLDIEKIEFLKVTNN+FMDQP PAHYVVVF
Subjt:  MVSAAKED--HTAS-APQVAVAICLLRGKWILMGRRLVSIGNSKFSLPSGHLEFGENFEECAAREIKEETGLDIEKIEFLKVTNNVFMDQPSPAHYVVVF

Query:  VRAVLTDPTQTPLNLEPEKCDGWDWYEWNNLPQPLFGPIKKMVMDGFNPFP
        VRAVLTDPTQTP+NLEPEKCDGWDWYEW+ LP PLFGPIKKMV DGFNPFP
Subjt:  VRAVLTDPTQTPLNLEPEKCDGWDWYEWNNLPQPLFGPIKKMVMDGFNPFP

XP_008446534.1 PREDICTED: nudix hydrolase 1-like [Cucumis melo]2.6e-7187.42Show/hide
Query:  MVSAAKEDHTAS--APQVAVAICLLRGKWILMGRRLVSIGNSKFSLPSGHLEFGENFEECAAREIKEETGLDIEKIEFLKVTNNVFMDQPSPAHYVVVFV
        +  A ++DH A+  +PQVAVAICLLR K ILMGRRLVSIGNSK+SLPSGHLEFGENFEECA REIKEETGLDI KIEFLKVTNN+FMDQP PAHYVVVFV
Subjt:  MVSAAKEDHTAS--APQVAVAICLLRGKWILMGRRLVSIGNSKFSLPSGHLEFGENFEECAAREIKEETGLDIEKIEFLKVTNNVFMDQPSPAHYVVVFV

Query:  RAVLTDPTQTPLNLEPEKCDGWDWYEWNNLPQPLFGPIKKMVMDGFNPFPQ
        RAVLTDPTQTPLNLEPEKCDGWDWYEW+NLPQPLFGPIKKMVMDGFNPFPQ
Subjt:  RAVLTDPTQTPLNLEPEKCDGWDWYEWNNLPQPLFGPIKKMVMDGFNPFPQ

XP_023541815.1 geranyl diphosphate phosphohydrolase-like [Cucurbita pepo subsp. pepo]5.6e-6686.76Show/hide
Query:  APQVAVAICLLRGKWILMGRRLVSIGNSKFSLPSGHLEFGENFEECAAREIKEETGLDIEKIEFLKVTNNVFMDQPSPAHYVVVFVRAVLTDPTQTPLNL
        +PQVAVAICLLRGK +LMGRRLVSIGNSK+SLPSGHLEFGENFEECAARE+KEETGLDIEK+EFLKVTNN+F+DQP+PAHYVVVFVRAVL DP QTPLNL
Subjt:  APQVAVAICLLRGKWILMGRRLVSIGNSKFSLPSGHLEFGENFEECAAREIKEETGLDIEKIEFLKVTNNVFMDQPSPAHYVVVFVRAVLTDPTQTPLNL

Query:  EPEKCDGWDWYEWNNLPQPLFGPIKKMVMDGFNPFP
        EP+KC GWDWYEW++LP+PLFGPIK MVM+GFNPFP
Subjt:  EPEKCDGWDWYEWNNLPQPLFGPIKKMVMDGFNPFP

XP_038892917.1 geranyl diphosphate phosphohydrolase [Benincasa hispida]1.2e-7190.48Show/hide
Query:  AKEDHTASA--PQVAVAICLLRGKWILMGRRLVSIGNSKFSLPSGHLEFGENFEECAAREIKEETGLDIEKIEFLKVTNNVFMDQPSPAHYVVVFVRAVL
        AKED  A+A  PQVAVAICLLRGK ILMGRRLVSIGNSK+SLPSGHLEFGENFEECAARE+KEETGLDIEKIEFLKVTNN+F+DQP  AHYVVVFVRAVL
Subjt:  AKEDHTASA--PQVAVAICLLRGKWILMGRRLVSIGNSKFSLPSGHLEFGENFEECAAREIKEETGLDIEKIEFLKVTNNVFMDQPSPAHYVVVFVRAVL

Query:  TDPTQTPLNLEPEKCDGWDWYEWNNLPQPLFGPIKKMVMDGFNPFPQ
         DPTQTPLNLEPEKCDGWDWYEW+NLPQPLFGPIKKMVMDGFNPFPQ
Subjt:  TDPTQTPLNLEPEKCDGWDWYEWNNLPQPLFGPIKKMVMDGFNPFPQ

TrEMBL top hitse value%identityAlignment
A0A0A0KR28 Nudix hydrolase domain-containing protein1.3e-6885.43Show/hide
Query:  MVSAAKED--HTAS-APQVAVAICLLRGKWILMGRRLVSIGNSKFSLPSGHLEFGENFEECAAREIKEETGLDIEKIEFLKVTNNVFMDQPSPAHYVVVF
        +V A ++D  H AS +PQVAVAICLL+ K ILMGRRLVSIGNSK+SLPSGHLEFGENFEECA REIKEETGLDIEKIEFLKVTNN+FMDQP PAHYVVVF
Subjt:  MVSAAKED--HTAS-APQVAVAICLLRGKWILMGRRLVSIGNSKFSLPSGHLEFGENFEECAAREIKEETGLDIEKIEFLKVTNNVFMDQPSPAHYVVVF

Query:  VRAVLTDPTQTPLNLEPEKCDGWDWYEWNNLPQPLFGPIKKMVMDGFNPFP
        VRAVLTDPTQTP+NLEPEKCDGWDWYEW+ LP PLFGPIKKMV DGFNPFP
Subjt:  VRAVLTDPTQTPLNLEPEKCDGWDWYEWNNLPQPLFGPIKKMVMDGFNPFP

A0A1S3BFY2 nudix hydrolase 1-like1.3e-7187.42Show/hide
Query:  MVSAAKEDHTAS--APQVAVAICLLRGKWILMGRRLVSIGNSKFSLPSGHLEFGENFEECAAREIKEETGLDIEKIEFLKVTNNVFMDQPSPAHYVVVFV
        +  A ++DH A+  +PQVAVAICLLR K ILMGRRLVSIGNSK+SLPSGHLEFGENFEECA REIKEETGLDI KIEFLKVTNN+FMDQP PAHYVVVFV
Subjt:  MVSAAKEDHTAS--APQVAVAICLLRGKWILMGRRLVSIGNSKFSLPSGHLEFGENFEECAAREIKEETGLDIEKIEFLKVTNNVFMDQPSPAHYVVVFV

Query:  RAVLTDPTQTPLNLEPEKCDGWDWYEWNNLPQPLFGPIKKMVMDGFNPFPQ
        RAVLTDPTQTPLNLEPEKCDGWDWYEW+NLPQPLFGPIKKMVMDGFNPFPQ
Subjt:  RAVLTDPTQTPLNLEPEKCDGWDWYEWNNLPQPLFGPIKKMVMDGFNPFPQ

A0A5D3CCL5 Nudix hydrolase 1-like1.3e-7187.42Show/hide
Query:  MVSAAKEDHTAS--APQVAVAICLLRGKWILMGRRLVSIGNSKFSLPSGHLEFGENFEECAAREIKEETGLDIEKIEFLKVTNNVFMDQPSPAHYVVVFV
        +  A ++DH A+  +PQVAVAICLLR K ILMGRRLVSIGNSK+SLPSGHLEFGENFEECA REIKEETGLDI KIEFLKVTNN+FMDQP PAHYVVVFV
Subjt:  MVSAAKEDHTAS--APQVAVAICLLRGKWILMGRRLVSIGNSKFSLPSGHLEFGENFEECAAREIKEETGLDIEKIEFLKVTNNVFMDQPSPAHYVVVFV

Query:  RAVLTDPTQTPLNLEPEKCDGWDWYEWNNLPQPLFGPIKKMVMDGFNPFPQ
        RAVLTDPTQTPLNLEPEKCDGWDWYEW+NLPQPLFGPIKKMVMDGFNPFPQ
Subjt:  RAVLTDPTQTPLNLEPEKCDGWDWYEWNNLPQPLFGPIKKMVMDGFNPFPQ

A0A6J1G1K2 geranyl diphosphate phosphohydrolase-like1.4e-6587.41Show/hide
Query:  APQVAVAICLLRGKWILMGRRLVSIGNSKFSLPSGHLEFGENFEECAAREIKEETGLDIEKIEFLKVTNNVFMDQPSPAHYVVVFVRAVLTDPTQTPLNL
        +PQVAVAICLLR K +LMGRRLVSIGNSK+SLPSGHLEFGENFEECAARE+KEETGLDIEK+EFLKVTNN+FMDQP+PAHYVVVFVRAVL DP QTPLNL
Subjt:  APQVAVAICLLRGKWILMGRRLVSIGNSKFSLPSGHLEFGENFEECAAREIKEETGLDIEKIEFLKVTNNVFMDQPSPAHYVVVFVRAVLTDPTQTPLNL

Query:  EPEKCDGWDWYEWNNLPQPLFGPIKKMVMDGFNPF
        EP+KC GWDWYEW++LPQPLFGPIK MVM+GFNPF
Subjt:  EPEKCDGWDWYEWNNLPQPLFGPIKKMVMDGFNPF

A0A6J1HTH5 geranyl diphosphate phosphohydrolase-like5.1e-6586.03Show/hide
Query:  APQVAVAICLLRGKWILMGRRLVSIGNSKFSLPSGHLEFGENFEECAAREIKEETGLDIEKIEFLKVTNNVFMDQPSPAHYVVVFVRAVLTDPTQTPLNL
        +PQVAVAICLLRGK +LMGRRLVSIGNSK+SLPSGHLEFGE FEECAARE+KEETGLDIEK+EFLKVTNN+F+DQP+PAHYVVVFVRAVL  P QTPLNL
Subjt:  APQVAVAICLLRGKWILMGRRLVSIGNSKFSLPSGHLEFGENFEECAAREIKEETGLDIEKIEFLKVTNNVFMDQPSPAHYVVVFVRAVLTDPTQTPLNL

Query:  EPEKCDGWDWYEWNNLPQPLFGPIKKMVMDGFNPFP
        EP+KC GWDWYEW++LPQPLFGPIK MVM+GFNPFP
Subjt:  EPEKCDGWDWYEWNNLPQPLFGPIKKMVMDGFNPFP

SwissProt top hitse value%identityAlignment
C5BHE7 NAD-capped RNA hydrolase NudC3.1e-0628.03Show/hide
Query:  PQVA--VAICLLRGKWILMGRRLVSIGNSKFSLPSGHLEFGENFEECAAREIKEETGLDIEKIEFLKVTNNVFMDQPSPAHYVVVFVRAVLTDPTQTPLN
        PQ+A  + + + R   IL+ R      N  +++ +G +E GE  E+ AAREI EE+ L ++ + ++         QP P  + ++   A L D     L 
Subjt:  PQVA--VAICLLRGKWILMGRRLVSIGNSKFSLPSGHLEFGENFEECAAREIKEETGLDIEKIEFLKVTNNVFMDQPSPAHYVVVFVRAVLTDPTQTPLN

Query:  LEPEKCDGWDWYEWNNLPQ-PLFGPIKKMVMD
         +P++    DWY ++ LPQ P  G + + +++
Subjt:  LEPEKCDGWDWYEWNNLPQ-PLFGPIKKMVMD

M4I1C6 Geranyl diphosphate phosphohydrolase2.0e-5367.63Show/hide
Query:  TASAPQVAVAICLLRGKWILMGRRLVSIGNSKFSLPSGHLEFGENFEECAAREIKEETGLDIEKIEFLKVTNNVFMDQPSPAHYVVVFVRAVLTDPTQTP
        TA + +VAV +CLLRG+ +L+GRR  S+G+S FSLPSGHLEFGE+FEECAARE+KEET LDI KIE L VTNN+F+D+  P+ YV VF+RAVL DP Q P
Subjt:  TASAPQVAVAICLLRGKWILMGRRLVSIGNSKFSLPSGHLEFGENFEECAAREIKEETGLDIEKIEFLKVTNNVFMDQPSPAHYVVVFVRAVLTDPTQTP

Query:  LNLEPEKCDGWDWYEWNNLPQPLFGPIKKMVMDGFNPFP
         N+EPE CDGW WYEW+NLP+PLF P+  +V DGFNPFP
Subjt:  LNLEPEKCDGWDWYEWNNLPQPLFGPIKKMVMDGFNPFP

Q8BG93 Nucleotide triphosphate diphosphatase NUDT151.4e-1936.62Show/hide
Query:  PQVAVAICLL---RGKWILMGRRLVSIGNSKFSLPSGHLEFGENFEECAAREIKEETGLDIEKIEFLKVTNNVFMDQPSPAHYVVVFVRA-VLTDPTQTP
        P V V + +L     + +L+G+R  S G   F LP GHLEFGE +EECA RE  EE GL ++ + F  V N+ F+++ +  HYV + ++  V       P
Subjt:  PQVAVAICLL---RGKWILMGRRLVSIGNSKFSLPSGHLEFGENFEECAAREIKEETGLDIEKIEFLKVTNNVFMDQPSPAHYVVVFVRA-VLTDPTQTP

Query:  LNLEPEKCDGWDWYEWNNLP--QPLFGPIKKMVMDGFNPFPQ
         N+EPEK + W+W  W   P    LF  ++ +   G++PF +
Subjt:  LNLEPEKCDGWDWYEWNNLP--QPLFGPIKKMVMDGFNPFPQ

Q9CA40 Nudix hydrolase 19.1e-5165.67Show/hide
Query:  PQVAVAICLLRGKWILMGRRLVSIGNSKFSLPSGHLEFGENFEECAAREIKEETGLDIEKIEFLKVTNNVFMDQPSPAHYVVVFVRAVLTDPTQTPLNLE
        P+VAV + +L G  IL+GRR  SIGNS F+LP GHLEFGE+FEECAARE+ EETGL IEK++ L VTNNVF + P+P+HYV V +RAVL DP+Q P N+E
Subjt:  PQVAVAICLLRGKWILMGRRLVSIGNSKFSLPSGHLEFGENFEECAAREIKEETGLDIEKIEFLKVTNNVFMDQPSPAHYVVVFVRAVLTDPTQTPLNLE

Query:  PEKCDGWDWYEWNNLPQPLFGPIKKMVMDGFNPF
        PEKC+GWDWY+W NLP+PLF P++K+   GFNPF
Subjt:  PEKCDGWDWYEWNNLPQPLFGPIKKMVMDGFNPF

Q9NV35 Nucleotide triphosphate diphosphatase NUDT151.1e-1938.4Show/hide
Query:  ILMGRRLVSIGNSKFSLPSGHLEFGENFEECAAREIKEETGLDIEKIEFLKVTNNVFMDQPSPAHYVVVFVRA-VLTDPTQTPLNLEPEKCDGWDWYEWN
        +L+G+R  S+G   F LP GHLEFGE +EECA RE  EE  L ++ + F  V N+ F+++ +  HYV + ++  V       P N+EPEK + W+W  W 
Subjt:  ILMGRRLVSIGNSKFSLPSGHLEFGENFEECAAREIKEETGLDIEKIEFLKVTNNVFMDQPSPAHYVVVFVRA-VLTDPTQTPLNLEPEKCDGWDWYEWN

Query:  NLP--QPLFGPIKKMVMDGFNPFPQ
         LP    LF  ++ +   G++PF +
Subjt:  NLP--QPLFGPIKKMVMDGFNPFPQ

Arabidopsis top hitse value%identityAlignment
AT1G68760.1 nudix hydrolase 16.4e-5265.67Show/hide
Query:  PQVAVAICLLRGKWILMGRRLVSIGNSKFSLPSGHLEFGENFEECAAREIKEETGLDIEKIEFLKVTNNVFMDQPSPAHYVVVFVRAVLTDPTQTPLNLE
        P+VAV + +L G  IL+GRR  SIGNS F+LP GHLEFGE+FEECAARE+ EETGL IEK++ L VTNNVF + P+P+HYV V +RAVL DP+Q P N+E
Subjt:  PQVAVAICLLRGKWILMGRRLVSIGNSKFSLPSGHLEFGENFEECAAREIKEETGLDIEKIEFLKVTNNVFMDQPSPAHYVVVFVRAVLTDPTQTPLNLE

Query:  PEKCDGWDWYEWNNLPQPLFGPIKKMVMDGFNPF
        PEKC+GWDWY+W NLP+PLF P++K+   GFNPF
Subjt:  PEKCDGWDWYEWNNLPQPLFGPIKKMVMDGFNPF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGTCTGCAGCCAAGGAAGATCATACGGCGTCCGCGCCACAAGTAGCCGTGGCAATTTGTTTGTTGCGAGGTAAATGGATTCTTATGGGACGTCGACTTGTGTCCAT
TGGCAACTCCAAATTTTCTCTCCCAAGTGGTCATCTCGAATTTGGAGAGAACTTTGAAGAATGTGCTGCAAGAGAAATTAAAGAAGAGACGGGTCTAGATATCGAGAAAA
TTGAGTTCTTAAAAGTGACGAATAATGTGTTTATGGATCAACCAAGTCCAGCCCATTATGTGGTGGTGTTCGTACGAGCAGTACTGACAGATCCGACACAAACTCCACTG
AATCTTGAGCCTGAGAAATGTGATGGTTGGGATTGGTATGAATGGAACAATCTGCCACAGCCTCTATTTGGTCCCATCAAGAAAATGGTGATGGATGGCTTTAATCCTTT
CCCACAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGTGTCTGCAGCCAAGGAAGATCATACGGCGTCCGCGCCACAAGTAGCCGTGGCAATTTGTTTGTTGCGAGGTAAATGGATTCTTATGGGACGTCGACTTGTGTCCAT
TGGCAACTCCAAATTTTCTCTCCCAAGTGGTCATCTCGAATTTGGAGAGAACTTTGAAGAATGTGCTGCAAGAGAAATTAAAGAAGAGACGGGTCTAGATATCGAGAAAA
TTGAGTTCTTAAAAGTGACGAATAATGTGTTTATGGATCAACCAAGTCCAGCCCATTATGTGGTGGTGTTCGTACGAGCAGTACTGACAGATCCGACACAAACTCCACTG
AATCTTGAGCCTGAGAAATGTGATGGTTGGGATTGGTATGAATGGAACAATCTGCCACAGCCTCTATTTGGTCCCATCAAGAAAATGGTGATGGATGGCTTTAATCCTTT
CCCACAATGA
Protein sequenceShow/hide protein sequence
MVSAAKEDHTASAPQVAVAICLLRGKWILMGRRLVSIGNSKFSLPSGHLEFGENFEECAAREIKEETGLDIEKIEFLKVTNNVFMDQPSPAHYVVVFVRAVLTDPTQTPL
NLEPEKCDGWDWYEWNNLPQPLFGPIKKMVMDGFNPFPQ